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The map label for this gene is nisX1 [H]

Identifier: 71910941

GI number: 71910941

Start: 1104071

End: 1104292

Strand: Direct

Name: nisX1 [H]

Synonym: M5005_Spy_1128

Alternate gene names: 71910941

Gene position: 1104071-1104292 (Clockwise)

Preceding gene: 71910940

Following gene: 71910953

Centisome position: 60.05

GC content: 33.33

Gene sequence:

>222_bases
ATGAATCGAAAAGGTAATCCATACGATAATGCACTCATGGAATCCTTTTATAAAACATTAAAAAGAGAGCTTGTCAATGA
TGCTCATTTCGCAACTATTAAGCAAGCTCAGCTTGAGATTTTTAAATATAGTGAGACTTACTATAACCCCAAACGTCTGC
ATTCAGCTTTAGGGTATCTCTCACCTGTTGAATTTGAAAAAAATAGTTACTCATTAGCTTAA

Upstream 100 bases:

>100_bases
AAAGCCTAAAGAAGGGGTAATCGTCCATACAGATCAGGGTTCTCAATATACCGGAGCATGATTTCAGGACCTACTTAGAC
AGAAAAAATGTAAGTCCAGT

Downstream 100 bases:

>100_bases
CTTTATGTCTATTTTTTCTTGACAAGTCCAACCAAATGTTAGTTTTTTTGTCCAACTTTTGGGGTGCAGTTCATCCATCC
GAAGCTTTTTATTATATGAC

Product: transposase pseudogene

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MNRKGNPYDNALMESFYKTLKRELVNDAHFATIKQAQLEIFKYSETYYNPKRLHSALGYLSPVEFEKNSYSLA

Sequences:

>Translated_73_residues
MNRKGNPYDNALMESFYKTLKRELVNDAHFATIKQAQLEIFKYSETYYNPKRLHSALGYLSPVEFEKNSYSLA
>Mature_73_residues
MNRKGNPYDNALMESFYKTLKRELVNDAHFATIKQAQLEIFKYSETYYNPKRLHSALGYLSPVEFEKNSYSLA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 8585; Mature: 8585

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKGNPYDNALMESFYKTLKRELVNDAHFATIKQAQLEIFKYSETYYNPKRLHSALGYL
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
SPVEFEKNSYSLA
CCCCCCCCCCCCC
>Mature Secondary Structure
MNRKGNPYDNALMESFYKTLKRELVNDAHFATIKQAQLEIFKYSETYYNPKRLHSALGYL
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
SPVEFEKNSYSLA
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]