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The map label for this gene is hcaR [C]

Identifier: 71910701

GI number: 71910701

Start: 878080

End: 878205

Strand: Reverse

Name: hcaR [C]

Synonym: M5005_Spy_0888

Alternate gene names: 71910701

Gene position: 878205-878080 (Counterclockwise)

Preceding gene: 71910711

Following gene: 71910700

Centisome position: 47.77

GC content: 34.13

Gene sequence:

>126_bases
ATGGATATTAGACAATTAACCTATTTTATTGCAGTTGCTGAAACAAAAAATCATTCCCACGCTGCTAAAAGTTTGTTTGT
AACGCAACCTACTCTTTCTCAATCAATTAAAAGGCTAGAGTCCTAG

Upstream 100 bases:

>100_bases
CAATAAGGAAGCAGAAAATCATGGCAATAAGGAGAGACATCAAAATAGGTTGTAAACCAAGTAGAGACGCTATTCCTTGA
CCAATCATGAAGGATCTACT

Downstream 100 bases:

>100_bases
TTTGAACACGACGCTTTTTACACAAAGTGATTGACAGCTACTACTAACCGAAGCTGGAGATATTTTATCACAAAGGCAAA
GACCTTGTGGATGACTTTAA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: LysR Family Regulatory Protein; LysR Family Transcriptional Regulator; Transcriptional Regulators LysR Family

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MDIRQLTYFIAVAETKNHSHAAKSLFVTQPTLSQSIKRLES

Sequences:

>Translated_41_residues
MDIRQLTYFIAVAETKNHSHAAKSLFVTQPTLSQSIKRLES
>Mature_41_residues
MDIRQLTYFIAVAETKNHSHAAKSLFVTQPTLSQSIKRLES

Specific function: Transcriptional Activator Of The Hca Operon For 3- Phenylpropionic Acid Catabolism. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4661; Mature: 4661

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRQLTYFIAVAETKNHSHAAKSLFVTQPTLSQSIKRLES
CCHHHEEEEEEEECCCCCCCHHHEEEEECCHHHHHHHHHCC
>Mature Secondary Structure
MDIRQLTYFIAVAETKNHSHAAKSLFVTQPTLSQSIKRLES
CCHHHEEEEEEEECCCCCCCHHHEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA