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The map label for this gene is ypfJ [H]

Identifier: 71910406

GI number: 71910406

Start: 591427

End: 592344

Strand: Reverse

Name: ypfJ [H]

Synonym: M5005_Spy_0593

Alternate gene names: 71910406

Gene position: 592344-591427 (Counterclockwise)

Preceding gene: 71910411

Following gene: 71910373

Centisome position: 32.22

GC content: 44.12

Gene sequence:

>918_bases
ATGAAAACGGATGATTTGAGAGAAAGTCAACAGGTTGAAGATAGACGTGGTCAATCGTCTGGTTCTTTTGGGGGCGGCGG
CCTAGGGGGCGGTCTCCTGCTTCAATTACTCTTTTCACGAGGAGGTTGGAAAACCAAGCTGGTTATTCTTCTCCTTCTCC
TAGTTATGGGAGGTGGTGGCCTATCTGGTGTTTTAGGAGGCAAGCCTTCTTCTACCAACAACAATGCCTATCAATCAAGC
CAAGTAACGCGTACAAATGGTGACAAGGCTAGTCAAGAACAGGTTTCTTTTGTCAGTAAGGTCTTCGCCTCTACCGAGGA
CTATTGGACTAAGACATTTCGTGAGAAAGGGTTAACTTATCATAAACCAACATTAGTTCTATATACTGGAGCAACTCAAA
CCGCTTGTGGCAGGGGGCAAGCCTCTTCTGGTCCTTTTTATTGCCCAGGCGATCAAAAAGTGTATTTAGATATTTCTTTT
TATAATGAACTATCAACCAAGTACGGCGCAAAAGGTGATTTTGCTATGGCCTATGTGATTGCTCATGAAGTTGGCCACCA
CATCCAAAATGAATTGGGAATTATGGATAATTACGCTAGCGCTAGACAAGGAAAATCAAAGGCTAAAGCCAATCAGCTCA
ACGTCAAGTTGGAATTACAATCTGATTACTATGCTGGTGCCTGGGCTAATTATGTTCAAGGGCAAGGCCTTTTGGAAAAA
GGAGATATTGAGGAAGCAATGGCAGCAGCTCACGCAGTTGGGGATGATACTCTGCAAGAAGAAACCTATGGCAGAACCGT
TCCTGATAGTTTTACACATGGCACTTCTAAGCAACGCCAACGTTGGTTTGACCGAGGTTACCAATATGGCGACTTTGAGC
ATGGTGATACCTTTAGCATCCCGTATAGTAAGCTTTAG

Upstream 100 bases:

>100_bases
CCTATTGCTTTTCCTATTTTTAGTTATAATCTCATCATAAAAATAGCAATTCTAATAGAATTATTTTATAATAAAATCAA
GAAATAGATGGGAGAAACTT

Downstream 100 bases:

>100_bases
GGAAATGGTGACGTATTGATAATAGTCACACTTAGAAAAAAACCAAACAAGTGCTGTGCTTGTTTGGTTTTTTTCTAATA
TCATAAACTCTTACCAGTCT

Product: neutral zinc metallopeptidase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKTDDLRESQQVEDRRGQSSGSFGGGGLGGGLLLQLLFSRGGWKTKLVILLLLLVMGGGGLSGVLGGKPSSTNNNAYQSS
QVTRTNGDKASQEQVSFVSKVFASTEDYWTKTFREKGLTYHKPTLVLYTGATQTACGRGQASSGPFYCPGDQKVYLDISF
YNELSTKYGAKGDFAMAYVIAHEVGHHIQNELGIMDNYASARQGKSKAKANQLNVKLELQSDYYAGAWANYVQGQGLLEK
GDIEEAMAAAHAVGDDTLQEETYGRTVPDSFTHGTSKQRQRWFDRGYQYGDFEHGDTFSIPYSKL

Sequences:

>Translated_305_residues
MKTDDLRESQQVEDRRGQSSGSFGGGGLGGGLLLQLLFSRGGWKTKLVILLLLLVMGGGGLSGVLGGKPSSTNNNAYQSS
QVTRTNGDKASQEQVSFVSKVFASTEDYWTKTFREKGLTYHKPTLVLYTGATQTACGRGQASSGPFYCPGDQKVYLDISF
YNELSTKYGAKGDFAMAYVIAHEVGHHIQNELGIMDNYASARQGKSKAKANQLNVKLELQSDYYAGAWANYVQGQGLLEK
GDIEEAMAAAHAVGDDTLQEETYGRTVPDSFTHGTSKQRQRWFDRGYQYGDFEHGDTFSIPYSKL
>Mature_305_residues
MKTDDLRESQQVEDRRGQSSGSFGGGGLGGGLLLQLLFSRGGWKTKLVILLLLLVMGGGGLSGVLGGKPSSTNNNAYQSS
QVTRTNGDKASQEQVSFVSKVFASTEDYWTKTFREKGLTYHKPTLVLYTGATQTACGRGQASSGPFYCPGDQKVYLDISF
YNELSTKYGAKGDFAMAYVIAHEVGHHIQNELGIMDNYASARQGKSKAKANQLNVKLELQSDYYAGAWANYVQGQGLLEK
GDIEEAMAAAHAVGDDTLQEETYGRTVPDSFTHGTSKQRQRWFDRGYQYGDFEHGDTFSIPYSKL

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=300, Percent_Identity=46.6666666666667, Blast_Score=262, Evalue=2e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 33334; Mature: 33334

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDDLRESQQVEDRRGQSSGSFGGGGLGGGLLLQLLFSRGGWKTKLVILLLLLVMGGGG
CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
LSGVLGGKPSSTNNNAYQSSQVTRTNGDKASQEQVSFVSKVFASTEDYWTKTFREKGLTY
CCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEE
HKPTLVLYTGATQTACGRGQASSGPFYCPGDQKVYLDISFYNELSTKYGAKGDFAMAYVI
ECCEEEEEECCCHHHCCCCCCCCCCEECCCCCEEEEEEEEHHHHHHHCCCCCCHHHHHHH
AHEVGHHIQNELGIMDNYASARQGKSKAKANQLNVKLELQSDYYAGAWANYVQGQGLLEK
HHHHHHHHHHHHCCHHCHHHHHCCHHHHHHCEEEEEEEECCCCCCCHHHHHHCCCCCCCC
GDIEEAMAAAHAVGDDTLQEETYGRTVPDSFTHGTSKQRQRWFDRGYQYGDFEHGDTFSI
CCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECC
PYSKL
CHHCC
>Mature Secondary Structure
MKTDDLRESQQVEDRRGQSSGSFGGGGLGGGLLLQLLFSRGGWKTKLVILLLLLVMGGGG
CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
LSGVLGGKPSSTNNNAYQSSQVTRTNGDKASQEQVSFVSKVFASTEDYWTKTFREKGLTY
CCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEE
HKPTLVLYTGATQTACGRGQASSGPFYCPGDQKVYLDISFYNELSTKYGAKGDFAMAYVI
ECCEEEEEECCCHHHCCCCCCCCCCEECCCCCEEEEEEEEHHHHHHHCCCCCCHHHHHHH
AHEVGHHIQNELGIMDNYASARQGKSKAKANQLNVKLELQSDYYAGAWANYVQGQGLLEK
HHHHHHHHHHHHCCHHCHHHHHCCHHHHHHCEEEEEEEECCCCCCCHHHHHHCCCCCCCC
GDIEEAMAAAHAVGDDTLQEETYGRTVPDSFTHGTSKQRQRWFDRGYQYGDFEHGDTFSI
CCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECC
PYSKL
CHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]