Click here to switch to the map view.

The map label for this gene is 71910370

Identifier: 71910370

GI number: 71910370

Start: 549398

End: 549988

Strand: Reverse

Name: 71910370

Synonym: M5005_Spy_0557

Alternate gene names: NA

Gene position: 549988-549398 (Counterclockwise)

Preceding gene: 71910371

Following gene: 71910368

Centisome position: 29.91

GC content: 40.27

Gene sequence:

>591_bases
TTGTCAGCTATCATCCGTCAATCTACCTCTAAACGTATCTCTGACAAGCGTGGGATCTACTTAGTGGAAAAACTTGTCTC
ATTAGCCAAGCAGTCTTATTTTACTGTTACGAAAACCTCTCCGATGATAGAAGAGGTTCGCTACTATGCCAAAGAATTAC
TTAGACTTTCTGAACGTCGTCAAGCTATTTTTGATAAGATGGTGGCGTCGGCTCAACCTTTACCAGAAGACAAGATTCTA
CGCTCTATTCCAAGTATCGTAGAAACAACTGCAACAAGTATTATTGGCGAACTCGGTGCTATTCGTCGTTTTCAATCTGC
TAATCAAATTAATGCTTTCATTGGGATTGACTTTAGACATTATGAGTCTGGCAACTATCTAGCTCAAGAGCACATTACCA
AACGTGGGAATCCTTATGCTCCAAAGATTCTTTTCAAGTGTATCCATGACATTGCTTTTGCTAGTCATACCAATCCTTGT
CATATCGCAGACTTCTATGAGAAACGAAAAAGGCAATCGCAAACAGCTTCAACCAAGCCACATACGATTGCCTCTAGACA
TTGCCTTGTCAGACAATGCTTTACCTCATAA

Upstream 100 bases:

>100_bases
CTGGAACACATCTTATTTGCACCAACTGGTGAGTAATACTGGAATGTGGTAACGGCTTTTTTCATGTAATAGCTTTGTAC
TGGAGCTAGCTGACAAAGCA

Downstream 100 bases:

>100_bases
CGCATAACAAACTTTACAATTACGCTTCGACCCAAAATCATTAAAGTCGTTGTTGCTCTATCATTGTAACACCTTGATCT
TAAAAATACTAGGCAAGGTT

Product: transposase

Products: NA

Alternate protein names: Degenerate Transposase; ISSep1-Like Transposase; ISSep1 Transposase

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSAIIRQSTSKRISDKRGIYLVEKLVSLAKQSYFTVTKTSPMIEEVRYYAKELLRLSERRQAIFDKMVASAQPLPEDKIL
RSIPSIVETTATSIIGELGAIRRFQSANQINAFIGIDFRHYESGNYLAQEHITKRGNPYAPKILFKCIHDIAFASHTNPC
HIADFYEKRKRQSQTASTKPHTIASRHCLVRQCFTS

Sequences:

>Translated_196_residues
MSAIIRQSTSKRISDKRGIYLVEKLVSLAKQSYFTVTKTSPMIEEVRYYAKELLRLSERRQAIFDKMVASAQPLPEDKIL
RSIPSIVETTATSIIGELGAIRRFQSANQINAFIGIDFRHYESGNYLAQEHITKRGNPYAPKILFKCIHDIAFASHTNPC
HIADFYEKRKRQSQTASTKPHTIASRHCLVRQCFTS
>Mature_195_residues
SAIIRQSTSKRISDKRGIYLVEKLVSLAKQSYFTVTKTSPMIEEVRYYAKELLRLSERRQAIFDKMVASAQPLPEDKILR
SIPSIVETTATSIIGELGAIRRFQSANQINAFIGIDFRHYESGNYLAQEHITKRGNPYAPKILFKCIHDIAFASHTNPCH
IADFYEKRKRQSQTASTKPHTIASRHCLVRQCFTS

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22395; Mature: 22264

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIIRQSTSKRISDKRGIYLVEKLVSLAKQSYFTVTKTSPMIEEVRYYAKELLRLSERR
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHH
QAIFDKMVASAQPLPEDKILRSIPSIVETTATSIIGELGAIRRFQSANQINAFIGIDFRH
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEE
YESGNYLAQEHITKRGNPYAPKILFKCIHDIAFASHTNPCHIADFYEKRKRQSQTASTKP
ECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
HTIASRHCLVRQCFTS
CHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAIIRQSTSKRISDKRGIYLVEKLVSLAKQSYFTVTKTSPMIEEVRYYAKELLRLSERR
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHH
QAIFDKMVASAQPLPEDKILRSIPSIVETTATSIIGELGAIRRFQSANQINAFIGIDFRH
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEE
YESGNYLAQEHITKRGNPYAPKILFKCIHDIAFASHTNPCHIADFYEKRKRQSQTASTKP
ECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
HTIASRHCLVRQCFTS
CHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA