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The map label for this gene is ycbL [C]

Identifier: 71910346

GI number: 71910346

Start: 521061

End: 521696

Strand: Reverse

Name: ycbL [C]

Synonym: M5005_Spy_0533

Alternate gene names: 71910346

Gene position: 521696-521061 (Counterclockwise)

Preceding gene: 71910359

Following gene: 71910335

Centisome position: 28.38

GC content: 37.26

Gene sequence:

>636_bases
ATGAAAATCTATAAAACAATAAACCACATTGCTGGTGAAAATACTTATTACCTCGTTAATGATCAAGCTGTTATCCTCAT
TGATCCAGGAAGTAACGGCCAAGAAATCATTGCTAAAATTAAATCCTTTGAAAAACCTTTAGTGGCTATCCTCTTAACGC
ATACTCACTATGATCATATTTTTAGTTTAGATTTGGTCAGAGATGCTTTTGATCATCCACCTGTTTATGTTTCAGAAAAA
GAAGCCGCTTGGCTATCTTCCCCAGATGATAATTTATCTGGCTTAGGCCGTCATGATGATATCATTACTGTTATAGCAAG
ACCGGCAGAGAACTTTTTTAAATTAAAGCAACCCTATCAACTAAATGGTTTTGAATTCACAGTTTTACCAACATCTGGTC
ATTCTTGGGGAGGAGTCTCATTTGTTTTCCACTCAGATGAATTAGTCGTTACTGGCGATGCTCTATTTCGTGAAACTATC
GGTCGTACTGACTTACCTACCAGTAACTTTGAGGACCTCATTACTGGTATTCGCCAAGAACTATTCACCTTACCTAATCA
TTACCGAGTTTATCCTGGGCATGGTCCTTCTACTACCATTTGTCACGAAAAAAATGCTAACCCCTTTTTTCATTGA

Upstream 100 bases:

>100_bases
AGAAATTGCTGTGAGATCTCATATTTTCTGAAACTAATTGCCATTTATTTTCCGCTACTCTTTTTTTAACAAAGTCTTGA
TTTTTTGGTACACTATCCTT

Downstream 100 bases:

>100_bases
CATAGCTATTTTAGATACTGTTTGAGGTTATCCTAAAACTGAAATCATAGTATTTTACTAAAAAAGAGCCACTAAATTTT
GAATGACACCCCAAAAGTTA

Product: hydroxyacylglutathione hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKIYKTINHIAGENTYYLVNDQAVILIDPGSNGQEIIAKIKSFEKPLVAILLTHTHYDHIFSLDLVRDAFDHPPVYVSEK
EAAWLSSPDDNLSGLGRHDDIITVIARPAENFFKLKQPYQLNGFEFTVLPTSGHSWGGVSFVFHSDELVVTGDALFRETI
GRTDLPTSNFEDLITGIRQELFTLPNHYRVYPGHGPSTTICHEKNANPFFH

Sequences:

>Translated_211_residues
MKIYKTINHIAGENTYYLVNDQAVILIDPGSNGQEIIAKIKSFEKPLVAILLTHTHYDHIFSLDLVRDAFDHPPVYVSEK
EAAWLSSPDDNLSGLGRHDDIITVIARPAENFFKLKQPYQLNGFEFTVLPTSGHSWGGVSFVFHSDELVVTGDALFRETI
GRTDLPTSNFEDLITGIRQELFTLPNHYRVYPGHGPSTTICHEKNANPFFH
>Mature_211_residues
MKIYKTINHIAGENTYYLVNDQAVILIDPGSNGQEIIAKIKSFEKPLVAILLTHTHYDHIFSLDLVRDAFDHPPVYVSEK
EAAWLSSPDDNLSGLGRHDDIITVIARPAENFFKLKQPYQLNGFEFTVLPTSGHSWGGVSFVFHSDELVVTGDALFRETI
GRTDLPTSNFEDLITGIRQELFTLPNHYRVYPGHGPSTTICHEKNANPFFH

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787158, Length=187, Percent_Identity=28.3422459893048, Blast_Score=82, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17538952, Length=189, Percent_Identity=28.042328042328, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23794; Mature: 23794

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYKTINHIAGENTYYLVNDQAVILIDPGSNGQEIIAKIKSFEKPLVAILLTHTHYDHI
CCHHHHHHHHCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCHH
FSLDLVRDAFDHPPVYVSEKEAAWLSSPDDNLSGLGRHDDIITVIARPAENFFKLKQPYQ
EEHHHHHHHHCCCCEEEECCCCEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCEE
LNGFEFTVLPTSGHSWGGVSFVFHSDELVVTGDALFRETIGRTDLPTSNFEDLITGIRQE
ECCEEEEEEECCCCCCCCEEEEEECCCEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LFTLPNHYRVYPGHGPSTTICHEKNANPFFH
HHCCCCCEEEECCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MKIYKTINHIAGENTYYLVNDQAVILIDPGSNGQEIIAKIKSFEKPLVAILLTHTHYDHI
CCHHHHHHHHCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCHH
FSLDLVRDAFDHPPVYVSEKEAAWLSSPDDNLSGLGRHDDIITVIARPAENFFKLKQPYQ
EEHHHHHHHHCCCCEEEECCCCEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCEE
LNGFEFTVLPTSGHSWGGVSFVFHSDELVVTGDALFRETIGRTDLPTSNFEDLITGIRQE
ECCEEEEEEECCCCCCCCEEEEEECCCEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LFTLPNHYRVYPGHGPSTTICHEKNANPFFH
HHCCCCCEEEECCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA