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The map label for this gene is yrrN [H]

Identifier: 71910302

GI number: 71910302

Start: 476869

End: 477237

Strand: Direct

Name: yrrN [H]

Synonym: M5005_Spy_0489

Alternate gene names: 71910302

Gene position: 476869-477237 (Clockwise)

Preceding gene: 71910300

Following gene: 71910303

Centisome position: 25.94

GC content: 36.31

Gene sequence:

>369_bases
ATGGAAAAAATAATTATTACAGCCACAGCTGAAAGCATTGAGCAAGTCAAAGCTTTATTAGCTGCTGGTGTTGATCGTAT
TTATGTTGGTGAAGCCAATTACGGGTTACGTCTTCCCCATAATTTTTCTTATGATGAATTGAGACAAATTGCCAAACTAG
TGCATGATGCAGGCAAAGAGTTGACAGTAGCTTGCAATGCTTTGATGCATCAAGATATGATGGATCAGATCAAACCCTTT
TTAGACTTAATGATAGAGATTGCTGTTGATTATCTTGTGGTTGGTGATGCAGGTGTGTTTTATGTCAATAAAAGGGATGG
CTATAACTTTAAACTGATTTATGATACCTCTGTTTTTTGTGACTTCTAG

Upstream 100 bases:

>100_bases
TGACTTATCATGCTATAACAGTAAGGGGACTAGCTTAACGTTTGGGCTTTTGCAAGAAATATGCTTAAGGTCTTAAAATT
TTTGGTATAATAAAGCTTAT

Downstream 100 bases:

>100_bases
CCGTCAGGTAAATTTCTGGGGGCAACATGGTGCTGTTGAAAGTGTTTTAGCAAGGGAAATCCCATCAGCAGAGTTATTCA
CCTTAGCTGAAAATTTGGAA

Product: U32 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MEKIIITATAESIEQVKALLAAGVDRIYVGEANYGLRLPHNFSYDELRQIAKLVHDAGKELTVACNALMHQDMMDQIKPF
LDLMIEIAVDYLVVGDAGVFYVNKRDGYNFKLIYDTSVFCDF

Sequences:

>Translated_122_residues
MEKIIITATAESIEQVKALLAAGVDRIYVGEANYGLRLPHNFSYDELRQIAKLVHDAGKELTVACNALMHQDMMDQIKPF
LDLMIEIAVDYLVVGDAGVFYVNKRDGYNFKLIYDTSVFCDF
>Mature_122_residues
MEKIIITATAESIEQVKALLAAGVDRIYVGEANYGLRLPHNFSYDELRQIAKLVHDAGKELTVACNALMHQDMMDQIKPF
LDLMIEIAVDYLVVGDAGVFYVNKRDGYNFKLIYDTSVFCDF

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 13784; Mature: 13784

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIIITATAESIEQVKALLAAGVDRIYVGEANYGLRLPHNFSYDELRQIAKLVHDAGKE
CCEEEEEECHHHHHHHHHHHHCCCCEEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCCH
LTVACNALMHQDMMDQIKPFLDLMIEIAVDYLVVGDAGVFYVNKRDGYNFKLIYDTSVFC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCEEEEEEECCEEE
DF
CC
>Mature Secondary Structure
MEKIIITATAESIEQVKALLAAGVDRIYVGEANYGLRLPHNFSYDELRQIAKLVHDAGKE
CCEEEEEECHHHHHHHHHHHHCCCCEEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCCH
LTVACNALMHQDMMDQIKPFLDLMIEIAVDYLVVGDAGVFYVNKRDGYNFKLIYDTSVFC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCEEEEEEECCEEE
DF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]