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The map label for this gene is 71906557

Identifier: 71906557

GI number: 71906557

Start: 993488

End: 994651

Strand: Reverse

Name: 71906557

Synonym: Daro_0918

Alternate gene names: NA

Gene position: 994651-993488 (Counterclockwise)

Preceding gene: 71906559

Following gene: 71906556

Centisome position: 22.1

GC content: 60.74

Gene sequence:

>1164_bases
ATGACCTCAACCTCCCTGCTCCAGCCCCGTTTTCAGCAGCTCAAGACGTTGCGTGCACTGGCCATCGGCCTGGCCATCGG
CTTTGCCTCTCCGTCCTTTGCCGACAACCTGCCGGAAGTGCAGCGCCTGATCAAGCAGGGACAGTATCCGCAGGCCATGG
AAAAGGTTGATGCCTACCTGAGCAGCCGCCCGAAGGATGCCCAGGGGCGCTTCCTCAAGGGCCTGATCTATACCGAAATG
AACAAGCCGGCGGAAGCGATCGGCATGTTTACTAAACTCTCGGAAGATTACCCGGAACTGCCTGAACCCTATAACAACCT
CGCCGTACTCTATGCTCAACAAAAGCAGTACGACAAGGCCCGCACGGCGCTCGAAATGGCAATAAGGACTCACCCGTCCT
ACGCCATCGCCTACGAAAATCTCGGCGATGTCTACGCCAAGCTGGCCAGCCAGGCCTACGACAAGGCGCTGCAACTGGAC
AATTCCAACTCGGCGACCCAGAACAAGCTGGCCCTGATCCGTGATCTGATTACCACCTCCGGCAAGGGCAACGTCAAGCC
GCAACTGCCGACCGCGGCAGCCGCACCTGCGCCGGTAGCTCCGGTGGCGCCGGCACCTGTCGCCCCGGTTGTCGCAAAAC
CGGCCACCCCGACACCTGCCACGGCAAACGCGACGATCGTTGCCTCCACGCCAGGCGCTGCTGCCGCGACGCCGCCGGCC
AAGGCAGTTCCGGCGCCCGTTGCAGCAGCCACCCCAGCCCCCGCTGCAACACCGATAGCAACACCGACACCTGCTCCGGC
TGCGCCGGTCAAGGCCGCCAACAGCGCCAGCGACGACATTACCAAAGTCATGACCGCCTGGGCCGATGCCTGGTCCCGGA
AGGATATGCGCGCTTACCTGAATACCTATTCGCATGATTTCGAGACCCCCAAGGGCATGAATCGCAAGGCCTGGGAACAG
GAACGCGAACAACGCATCGCCGGCAAGGGTGGCAAGATTTCTGTTTCCTTTGACACGCCGCAAATCACCGTCAATGGGGA
CAAGGCAACCGCCAAGTTCCGTCAGCATTACAAGGCGACCGGCCTGAGCAGTTCGACGACCAAAACGCTGGTCTTTGTTC
GTAGTGGCAACAAGTGGCAGATCAAGGAAGAAAACGCCCGCTGA

Upstream 100 bases:

>100_bases
GATCAATTCGAGGCGCCGCCGGCACGCTAAAACCTATGGATTCACCGGCGTTTTTGGTAGAATCAAAGGATTGTATAACG
CCGAAAAGTATAGCATAGCG

Downstream 100 bases:

>100_bases
TGTTGAAAGGCAGATTCATTCTGGCCGGTCTGGCCGCCCTTGTGGCCGCCGGCGCATTAGCCAAGCTGGCGGATAAACCG
ACCACTTCCCGCCTCGTCGA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family Protein; Signal Peptide Protein; Tpr Repeat-Containing Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Type I Secretion Outer Membrane Protein lC; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; TPR Domain-Containing Protein; Exported Protein

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MTSTSLLQPRFQQLKTLRALAIGLAIGFASPSFADNLPEVQRLIKQGQYPQAMEKVDAYLSSRPKDAQGRFLKGLIYTEM
NKPAEAIGMFTKLSEDYPELPEPYNNLAVLYAQQKQYDKARTALEMAIRTHPSYAIAYENLGDVYAKLASQAYDKALQLD
NSNSATQNKLALIRDLITTSGKGNVKPQLPTAAAAPAPVAPVAPAPVAPVVAKPATPTPATANATIVASTPGAAAATPPA
KAVPAPVAAATPAPAATPIATPTPAPAAPVKAANSASDDITKVMTAWADAWSRKDMRAYLNTYSHDFETPKGMNRKAWEQ
EREQRIAGKGGKISVSFDTPQITVNGDKATAKFRQHYKATGLSSSTTKTLVFVRSGNKWQIKEENAR

Sequences:

>Translated_387_residues
MTSTSLLQPRFQQLKTLRALAIGLAIGFASPSFADNLPEVQRLIKQGQYPQAMEKVDAYLSSRPKDAQGRFLKGLIYTEM
NKPAEAIGMFTKLSEDYPELPEPYNNLAVLYAQQKQYDKARTALEMAIRTHPSYAIAYENLGDVYAKLASQAYDKALQLD
NSNSATQNKLALIRDLITTSGKGNVKPQLPTAAAAPAPVAPVAPAPVAPVVAKPATPTPATANATIVASTPGAAAATPPA
KAVPAPVAAATPAPAATPIATPTPAPAAPVKAANSASDDITKVMTAWADAWSRKDMRAYLNTYSHDFETPKGMNRKAWEQ
EREQRIAGKGGKISVSFDTPQITVNGDKATAKFRQHYKATGLSSSTTKTLVFVRSGNKWQIKEENAR
>Mature_386_residues
TSTSLLQPRFQQLKTLRALAIGLAIGFASPSFADNLPEVQRLIKQGQYPQAMEKVDAYLSSRPKDAQGRFLKGLIYTEMN
KPAEAIGMFTKLSEDYPELPEPYNNLAVLYAQQKQYDKARTALEMAIRTHPSYAIAYENLGDVYAKLASQAYDKALQLDN
SNSATQNKLALIRDLITTSGKGNVKPQLPTAAAAPAPVAPVAPAPVAPVVAKPATPTPATANATIVASTPGAAAATPPAK
AVPAPVAAATPAPAATPIATPTPAPAAPVKAANSASDDITKVMTAWADAWSRKDMRAYLNTYSHDFETPKGMNRKAWEQE
REQRIAGKGGKISVSFDTPQITVNGDKATAKFRQHYKATGLSSSTTKTLVFVRSGNKWQIKEENAR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41405; Mature: 41274

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTSLLQPRFQQLKTLRALAIGLAIGFASPSFADNLPEVQRLIKQGQYPQAMEKVDAYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHH
SSRPKDAQGRFLKGLIYTEMNKPAEAIGMFTKLSEDYPELPEPYNNLAVLYAQQKQYDKA
HCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHH
RTALEMAIRTHPSYAIAYENLGDVYAKLASQAYDKALQLDNSNSATQNKLALIRDLITTS
HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
GKGNVKPQLPTAAAAPAPVAPVAPAPVAPVVAKPATPTPATANATIVASTPGAAAATPPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCC
KAVPAPVAAATPAPAATPIATPTPAPAAPVKAANSASDDITKVMTAWADAWSRKDMRAYL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NTYSHDFETPKGMNRKAWEQEREQRIAGKGGKISVSFDTPQITVNGDKATAKFRQHYKAT
HHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHC
GLSSSTTKTLVFVRSGNKWQIKEENAR
CCCCCCCEEEEEEECCCEEEEECCCCC
>Mature Secondary Structure 
TSTSLLQPRFQQLKTLRALAIGLAIGFASPSFADNLPEVQRLIKQGQYPQAMEKVDAYL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHH
SSRPKDAQGRFLKGLIYTEMNKPAEAIGMFTKLSEDYPELPEPYNNLAVLYAQQKQYDKA
HCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHH
RTALEMAIRTHPSYAIAYENLGDVYAKLASQAYDKALQLDNSNSATQNKLALIRDLITTS
HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
GKGNVKPQLPTAAAAPAPVAPVAPAPVAPVVAKPATPTPATANATIVASTPGAAAATPPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCC
KAVPAPVAAATPAPAATPIATPTPAPAAPVKAANSASDDITKVMTAWADAWSRKDMRAYL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NTYSHDFETPKGMNRKAWEQEREQRIAGKGGKISVSFDTPQITVNGDKATAKFRQHYKAT
HHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHC
GLSSSTTKTLVFVRSGNKWQIKEENAR
CCCCCCCEEEEEEECCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA