| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
Click here to switch to the map view.
The map label for this gene is 71893916
Identifier: 71893916
GI number: 71893916
Start: 733136
End: 733585
Strand: Reverse
Name: 71893916
Synonym: MHJ_0566
Alternate gene names: NA
Gene position: 733585-733136 (Counterclockwise)
Preceding gene: 71893918
Following gene: 71893915
Centisome position: 81.75
GC content: 29.56
Gene sequence:
>450_bases ATGAATCAAGATGACCGCGATTATATCAGGGAAAAATTAAATTCCCCTATTGATTTTTATTCAAATGATCGATTAGTTAT GTGAGATTTGGCTGAAAAAACAAAGGATACAGCAAATTTGATTCTAGGAAATGGAAGGCTAACAGATCCAAATAATAATT TAAATAAAGATATCGGTTTTACTAAAGATCGCTTTGTTGTTGGGGAAGGGCTAGCTAATGATGCTATTGATTGAACTAAC CCTAAAAATGAGTTTGATATTCAACCAAGTAAAGCTCAAAATAATCAATCATACGTCAAAATATATTTTCCCAGTTATCA TGTAAGGAGATTAAGAATGATAGGGAATGAAAAAAGGGGCATAAAGCGCGAATTTATAAAAAGAAAAAAAATGTTAAATA TTGAAAAGGTGCATTTTTTATATGGAAAAGCTGATAAATTCATTATCTAA
Upstream 100 bases:
>100_bases AACTCAAGCCTGAATTTTAGCCGTTGGGAGTTTGCTAGCCCAATCAGTATTAACTCAAATTGTTATTGATAATTTGCTGC CTAGTTGAATAAAAGATGAA
Downstream 100 bases:
>100_bases GGCAAAAAAACAGTTAAAAAAACTAAAATATATAGAAGTTAATATTAAAAGTCGTTGTTCAATTCGAAACATAGTTGAGC ATGAAATTCATTTATCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MNQDDRDYIREKLNSPIDFYSNDRLVMWDLAEKTKDTANLILGNGRLTDPNNNLNKDIGFTKDRFVVGEGLANDAIDWTN PKNEFDIQPSKAQNNQSYVKIYFPSYHVRRLRMIGNEKRGIKREFIKRKKMLNIEKVHFLYGKADKFII
Sequences:
>Translated_149_residues MNQDDRDYIREKLNSPIDFYSNDRLVM*DLAEKTKDTANLILGNGRLTDPNNNLNKDIGFTKDRFVVGEGLANDAID*TN PKNEFDIQPSKAQNNQSYVKIYFPSYHVRRLRMIGNEKRGIKREFIKRKKMLNIEKVHFLYGKADKFII >Mature_149_residues MNQDDRDYIREKLNSPIDFYSNDRLVM*DLAEKTKDTANLILGNGRLTDPNNNLNKDIGFTKDRFVVGEGLANDAID*TN PKNEFDIQPSKAQNNQSYVKIYFPSYHVRRLRMIGNEKRGIKREFIKRKKMLNIEKVHFLYGKADKFII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17180; Mature: 17180
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQDDRDYIREKLNSPIDFYSNDRLVMDLAEKTKDTANLILGNGRLTDPNNNLNKDIGFT CCCCHHHHHHHHHCCCCCCCCCCEEEEEHHHCCCCCEEEEECCCEEECCCCCCCCCCCCC KDRFVVGEGLANDAIDTNPKNEFDIQPSKAQNNQSYVKIYFPSYHVRRLRMIGNEKRGIK CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCHH REFIKRKKMLNIEKVHFLYGKADKFII HHHHHHHHHCCHHHEEEEECCCCCCCC >Mature Secondary Structure MNQDDRDYIREKLNSPIDFYSNDRLVMDLAEKTKDTANLILGNGRLTDPNNNLNKDIGFT CCCCHHHHHHHHHCCCCCCCCCCEEEEEHHHCCCCCEEEEECCCEEECCCCCCCCCCCCC KDRFVVGEGLANDAIDTNPKNEFDIQPSKAQNNQSYVKIYFPSYHVRRLRMIGNEKRGIK CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCHH REFIKRKKMLNIEKVHFLYGKADKFII HHHHHHHHHCCHHHEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA