| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
Click here to switch to the map view.
The map label for this gene is 71893912
Identifier: 71893912
GI number: 71893912
Start: 725485
End: 727164
Strand: Reverse
Name: 71893912
Synonym: MHJ_0561
Alternate gene names: NA
Gene position: 727164-725485 (Counterclockwise)
Preceding gene: 71893913
Following gene: 71893911
Centisome position: 81.03
GC content: 26.37
Gene sequence:
>1680_bases ATTCGAAACATAGTTGAGCATGAAGTTCAGTTATTGTTTAATTGTAATTATGAGTATTATTATGAAAATTTTTTATTATA TTACCTTAGTAATGGCTTCTATCCTAACCCAATTGAAAGAATTATTAGTTTAAATTATAAACAAGAAGATTATATTTATA ATTTAAAACTAGAAGATATCACAAAAAGTGCATTTTTCTCCAAAAGACTCAATAATTTCCATTTTTATAATGATATTAGG TGTTTAATTGGCGGTTGAGCAAACGTTGAATATTGTGAAAAAAATGGAAAAGAAAATTTTGATTTTATCGATGAACTTCG TCCTTCCTATGATTTATACGACGGTAAAGGTTTTGAAGAAGTTGTTGCTGTTGTCTTTGAAAACTTTGATGATATTGAAA AATGCGAATTTTCAATCTCTTATCCGGCTGTCTTTTCAAAAATGTTTAAATCAAAAAGCGAATTAAGAGAAATTGAAGCT TTAATTATTAAGGAAATACAGGAAAGTGTTCCTTATGCAAAACCAAAAAATTTAGCAAATTATCACGAAAAAATCTTTGA TTTTTTATCAAATAGATATGAATATAATTCAAAGTTTGTAGATATAAATAAAGCATATTTAGGACAAAATGTAGAAAATA TTTACAATTTGTTATTAAAAGAGAATTATAATTTTAGTGAAAAAACCCAAATTCAACCAATTCAAAATGTATTTACTTTT GAAACTTATGAAAATTTGCTTAAAAAATTTGAAAAATACGGGATTAAAAAGCTTAACTTAAATATTGAAAATCGTGATAA ATTTATTCTTAGTTGATTTGATAAATTTGGCCCAGAATATCGAAAATATTGCATCGAACTTTTTGGTAAAAAAGGCCAAA CTTATTATGATAGTGTGAATAATTGGACAAATAAAATTGAATTAATCTATTTGTTGCAAATTTTATTTGGCCCAAAATAT GAAATTGAAGGTCAATATTTTTACCCCGATAAACCTGATTATTTAATTCTACCAAGATGGGCGAAATTAAAACTTGAAAA TTTCGAAATTTTTTACTTTGGTGGGCAAGAATACGGACTTTTTGATGAAATAATTTCCCAATTTGACTCAAAAAAGCCAG TTTTTTGATTTAAACCATATTACTACCCCGCCTATGGATCAGGCGAAGGATGAATTTTGCCAATTGCATTAAAAAATTTC ATTTTATTGTATGTTGATAATCAAAAAATTTATTACTGATTTGGTCATTCAAATTTATATGATAATATTTATCAAGGTAA ATACGAAATTTTAAAATATTATTTTAAACAAAAATTGGTCAAACTTGAACAAGATATTTTTCTGCGTGATGGCATAGATC CCGAATTTTTTGTTTCTAGATCACCAAGGTATAACAATTTATCTAAAAATGTGATTGAATCATCGAGGGAAGAATTAATT TTATATCGGGATGCATTGAATAAATATCTAAAAGAAATAGACCATGAATTTGATCGTTTTACAGACTTTCTAGAAAATAC TAATTTATATAGCCAACAAGAAAAAGAATTAATTCTAGAAGAACACCCTCCCTTTTCTAGGGATTTGGATGGCAGAGATC AATATTATGAAGAAATTGCGAGAGTAGATTTTCGCGGTCATAAAAATAAAAAATATCTTGAGATAGAAGGGGAATCGTAG
Upstream 100 bases:
>100_bases CATTTTTTATATGGAGAAGCTGATAAATTCATTATCTAAGGCAAAAAAACAGTTAAAAAAACTAAAATATATAGAAATTA ATATTAAAAGTCGTTGTTCA
Downstream 100 bases:
>100_bases ATCTTTTTATTAATTAATAAATTTAAAGACAAAAGATTTAAGTTTATTTTTAAAATTCTTAACTTGTTTTTCATTTTTAT TATCTATTTAAAAATAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MRNIVEHEVQLLFNCNYEYYYENFLLYYLSNGFYPNPIERIISLNYKQEDYIYNLKLEDITKSAFFSKRLNNFHFYNDIR CLIGGWANVEYCEKNGKENFDFIDELRPSYDLYDGKGFEEVVAVVFENFDDIEKCEFSISYPAVFSKMFKSKSELREIEA LIIKEIQESVPYAKPKNLANYHEKIFDFLSNRYEYNSKFVDINKAYLGQNVENIYNLLLKENYNFSEKTQIQPIQNVFTF ETYENLLKKFEKYGIKKLNLNIENRDKFILSWFDKFGPEYRKYCIELFGKKGQTYYDSVNNWTNKIELIYLLQILFGPKY EIEGQYFYPDKPDYLILPRWAKLKLENFEIFYFGGQEYGLFDEIISQFDSKKPVFWFKPYYYPAYGSGEGWILPIALKNF ILLYVDNQKIYYWFGHSNLYDNIYQGKYEILKYYFKQKLVKLEQDIFLRDGIDPEFFVSRSPRYNNLSKNVIESSREELI LYRDALNKYLKEIDHEFDRFTDFLENTNLYSQQEKELILEEHPPFSRDLDGRDQYYEEIARVDFRGHKNKKYLEIEGES
Sequences:
>Translated_559_residues MRNIVEHEVQLLFNCNYEYYYENFLLYYLSNGFYPNPIERIISLNYKQEDYIYNLKLEDITKSAFFSKRLNNFHFYNDIR CLIGG*ANVEYCEKNGKENFDFIDELRPSYDLYDGKGFEEVVAVVFENFDDIEKCEFSISYPAVFSKMFKSKSELREIEA LIIKEIQESVPYAKPKNLANYHEKIFDFLSNRYEYNSKFVDINKAYLGQNVENIYNLLLKENYNFSEKTQIQPIQNVFTF ETYENLLKKFEKYGIKKLNLNIENRDKFILS*FDKFGPEYRKYCIELFGKKGQTYYDSVNNWTNKIELIYLLQILFGPKY EIEGQYFYPDKPDYLILPRWAKLKLENFEIFYFGGQEYGLFDEIISQFDSKKPVF*FKPYYYPAYGSGEG*ILPIALKNF ILLYVDNQKIYY*FGHSNLYDNIYQGKYEILKYYFKQKLVKLEQDIFLRDGIDPEFFVSRSPRYNNLSKNVIESSREELI LYRDALNKYLKEIDHEFDRFTDFLENTNLYSQQEKELILEEHPPFSRDLDGRDQYYEEIARVDFRGHKNKKYLEIEGES >Mature_559_residues MRNIVEHEVQLLFNCNYEYYYENFLLYYLSNGFYPNPIERIISLNYKQEDYIYNLKLEDITKSAFFSKRLNNFHFYNDIR CLIGG*ANVEYCEKNGKENFDFIDELRPSYDLYDGKGFEEVVAVVFENFDDIEKCEFSISYPAVFSKMFKSKSELREIEA LIIKEIQESVPYAKPKNLANYHEKIFDFLSNRYEYNSKFVDINKAYLGQNVENIYNLLLKENYNFSEKTQIQPIQNVFTF ETYENLLKKFEKYGIKKLNLNIENRDKFILS*FDKFGPEYRKYCIELFGKKGQTYYDSVNNWTNKIELIYLLQILFGPKY EIEGQYFYPDKPDYLILPRWAKLKLENFEIFYFGGQEYGLFDEIISQFDSKKPVF*FKPYYYPAYGSGEG*ILPIALKNF ILLYVDNQKIYY*FGHSNLYDNIYQGKYEILKYYFKQKLVKLEQDIFLRDGIDPEFFVSRSPRYNNLSKNVIESSREELI LYRDALNKYLKEIDHEFDRFTDFLENTNLYSQQEKELILEEHPPFSRDLDGRDQYYEEIARVDFRGHKNKKYLEIEGES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66759; Mature: 66759
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNIVEHEVQLLFNCNYEYYYENFLLYYLSNGFYPNPIERIISLNYKQEDYIYNLKLEDI CCCHHHHHHEEEEECCEEEEHHHEEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEEHHHH TKSAFFSKRLNNFHFYNDIRCLIGGANVEYCEKNGKENFDFIDELRPSYDLYDGKGFEEV HHHHHHHHHHCCCCEECCEEEEEECCCHHHHHCCCCCCCCHHHHCCCCCCCCCCCCHHHH VAVVFENFDDIEKCEFSISYPAVFSKMFKSKSELREIEALIIKEIQESVPYAKPKNLANY HHHHHHCCCCHHHCEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH HEKIFDFLSNRYEYNSKFVDINKAYLGQNVENIYNLLLKENYNFSEKTQIQPIQNVFTFE HHHHHHHHHCCEECCCEEEECCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH TYENLLKKFEKYGIKKLNLNIENRDKFILSFDKFGPEYRKYCIELFGKKGQTYYDSVNNW HHHHHHHHHHHCCCEEEEEEECCCCEEEEEEHHCCHHHHHHHHHHHCCCCCCHHHHHHHH TNKIELIYLLQILFGPKYEIEGQYFYPDKPDYLILPRWAKLKLENFEIFYFGGQEYGLFD HHHHHHHHHHHHHHCCCEEECCEEECCCCCCEEEECCHHEEEEEEEEEEEECCCCCCHHH EIISQFDSKKPVFFKPYYYPAYGSGEGILPIALKNFILLYVDNQKIYYFGHSNLYDNIYQ HHHHHHCCCCCEEECCEECCCCCCCCCEEHEECCCEEEEEEECCEEEEEECCCHHHHHHC GKYEILKYYFKQKLVKLEQDIFLRDGIDPEFFVSRSPRYNNLSKNVIESSREELILYRDA CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCHHHHHHCCHHHEEHHHHH LNKYLKEIDHEFDRFTDFLENTNLYSQQEKELILEEHPPFSRDLDGRDQYYEEIARVDFR HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC GHKNKKYLEIEGES CCCCCEEEEEECCC >Mature Secondary Structure MRNIVEHEVQLLFNCNYEYYYENFLLYYLSNGFYPNPIERIISLNYKQEDYIYNLKLEDI CCCHHHHHHEEEEECCEEEEHHHEEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEEHHHH TKSAFFSKRLNNFHFYNDIRCLIGGANVEYCEKNGKENFDFIDELRPSYDLYDGKGFEEV HHHHHHHHHHCCCCEECCEEEEEECCCHHHHHCCCCCCCCHHHHCCCCCCCCCCCCHHHH VAVVFENFDDIEKCEFSISYPAVFSKMFKSKSELREIEALIIKEIQESVPYAKPKNLANY HHHHHHCCCCHHHCEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH HEKIFDFLSNRYEYNSKFVDINKAYLGQNVENIYNLLLKENYNFSEKTQIQPIQNVFTFE HHHHHHHHHCCEECCCEEEECCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH TYENLLKKFEKYGIKKLNLNIENRDKFILSFDKFGPEYRKYCIELFGKKGQTYYDSVNNW HHHHHHHHHHHCCCEEEEEEECCCCEEEEEEHHCCHHHHHHHHHHHCCCCCCHHHHHHHH TNKIELIYLLQILFGPKYEIEGQYFYPDKPDYLILPRWAKLKLENFEIFYFGGQEYGLFD HHHHHHHHHHHHHHCCCEEECCEEECCCCCCEEEECCHHEEEEEEEEEEEECCCCCCHHH EIISQFDSKKPVFFKPYYYPAYGSGEGILPIALKNFILLYVDNQKIYYFGHSNLYDNIYQ HHHHHHCCCCCEEECCEECCCCCCCCCEEHEECCCEEEEEEECCEEEEEECCCHHHHHHC GKYEILKYYFKQKLVKLEQDIFLRDGIDPEFFVSRSPRYNNLSKNVIESSREELILYRDA CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCHHHHHHCCHHHEEHHHHH LNKYLKEIDHEFDRFTDFLENTNLYSQQEKELILEEHPPFSRDLDGRDQYYEEIARVDFR HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC GHKNKKYLEIEGES CCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA