Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is mod [H]
Identifier: 71893774
GI number: 71893774
Start: 514625
End: 516283
Strand: Reverse
Name: mod [H]
Synonym: MHJ_0423
Alternate gene names: 71893774
Gene position: 516283-514625 (Counterclockwise)
Preceding gene: 71893775
Following gene: 71893773
Centisome position: 57.53
GC content: 30.38
Gene sequence:
>1659_bases TTAGAAATATACAAACAAAAATTAGATGAAATTTCATCAAAAGAACTAAATTCTGACCAAAAACAATTAGCCTACAAAAT TCTTGAAAAATTCCCGGATAAGGAACTTGAATATGTCTATCAGTTTGTCGTTCAGCGAATTAAAACCGGTTTTCGCTTTG ATTCTGCCCCCGAAAGTGATACAAATACTGTTGCTATTTTAGAAAAAGATGAAAATCTTAGTTTTAAATCCAATGAAAAT AATCAAAATCAAAATACTTTAATAATTGGCGAAAATTATGATGCTCTTAAAAATCTTTTAGTTCTCGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGCGACCGCAGCCGGGTATGATATAATTTATATCGATCCACCTTATAATACTCAGGCTA GTTTTAATGAAGGCAACCAGATTGCAAATGATAAAGAAAATATCTTACCTTCAAAATTTATTTACCGAGATAAATACTCG CGAAATGGCTGACTAAATTTATTAAATGAGCGACTAAATTTAGCCAAAAAACTTTTAAAAGACGACGGGATAATTTTTGT CTCAATTGATGATAATCAACACGGCTACTTAAAAGTTTTAATGGATGAAATTTTTGGCGAGGAAAATTTTGTTGCTAATT TAGTTTGGCAAAAGAAAAACGAGGGATCAGCGGCAGACTCCAAATTTGTAAAAGTCCTAACAGAGTATGTATTAGCTTAT TCAAAAAACATTCAACATTTAACAACAAATATTTATGTCCAAAATATTAATGACGGTTCATATAAATTTTCTGATGAGTA TATTCAAGAAAGAGGAAAATATAAGTTGATCCAACTTGATCGTGCCTCATTAACGTGATCTGAAGGACTTGATTATCCGA TTGAATATAATGGCAAAATTTATTATGCTGGCGGGAGTCAAGAAAAGTGACAAGCCAGGCATCAGGGAAACCGCGCTGTT AAAGATTGGAGATGGCGTTGAGCTAGGAAAAAATTAGATTGAGGAATCAAAAATGGTTTTATTGTTTTCAAAAATGAAAA GGTTTTTTCAAAACAATACCAATTCGTTGATAACAATAACCAAAAAATTGAAAGAGTTTCGAAATTTTCTAATTTAATAT TATTAGCCCAAGGAACTGAAGGCACCCAGGAGCAAAAAAATATTTTTTCAACAAAGGTTTTTGATCATCCCAAACCAATT GAATTAATTAAGTATTTAATTAATATTCATCCCAATAAAAATGCAAAAATTCTTGATTTTTTTGCCGGAAGTGGAACAAC CGGTCATGCAGTTTGAGAGTTGAACCGTCAGGATGGCGGAAACAGAATTTTTACTTTAGTCACAAACAATCAAAATAATA TCGCAACTAACATAACTTATGAAAGACTTTTTCGGATAAATCACGGTTTTGGAACAAAAAAAGAGCAAAATTTTGATTGG ATCAAGAAAAATCAACCTTATAAAACTAATTTAGATGTTTTTCGAATTAATTATTTTAATACAGAAATTCTTAACAAGGA AAATGATGTTAATTTATTAGTTAAAAAACTAGAAAAAATGCTAGTTGATTTTGGAATTTCTAGCAAAAATAACATAAATC TAATTGAATATCTTAACTATCTCCTTGCGCTTTTACCCCAAAAAAAGAATAAAAAATAA
Upstream 100 bases:
>100_bases AATATATTAGCAAATTATATTATAATTTTTATATTTTTTATGACAAAAATTATCTTAATAAAGGAAAGTTTCAATGACAG ATTCAAAAATCCTGAATTTA
Downstream 100 bases:
>100_bases TGTATTTAATAGATGCCCAAAAAAACGTTGTTAATAAATTATTTAAAAAACCGCATAATTCTCTTAGTAAAGAAAAAAAT GAAATTTTTTTCATTAAAAC
Product: putative type III restriction-modification system: methylase
Products: NA
Alternate protein names: M.StyLTI; StyLTI methyltransferase [H]
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MEIYKQKLDEISSKELNSDQKQLAYKILEKFPDKELEYVYQFVVQRIKTGFRFDSAPESDTNTVAILEKDENLSFKSNEN NQNQNTLIIGENYDALKNLLVLERERERERERERATAAGYDIIYIDPPYNTQASFNEGNQIANDKENILPSKFIYRDKYS RNGWLNLLNERLNLAKKLLKDDGIIFVSIDDNQHGYLKVLMDEIFGEENFVANLVWQKKNEGSAADSKFVKVLTEYVLAY SKNIQHLTTNIYVQNINDGSYKFSDEYIQERGKYKLIQLDRASLTWSEGLDYPIEYNGKIYYAGGSQEKWQARHQGNRAV KDWRWRWARKKLDWGIKNGFIVFKNEKVFSKQYQFVDNNNQKIERVSKFSNLILLAQGTEGTQEQKNIFSTKVFDHPKPI ELIKYLINIHPNKNAKILDFFAGSGTTGHAVWELNRQDGGNRIFTLVTNNQNNIATNITYERLFRINHGFGTKKEQNFDW IKKNQPYKTNLDVFRINYFNTEILNKENDVNLLVKKLEKMLVDFGISSKNNINLIEYLNYLLALLPQKKNKK
Sequences:
>Translated_552_residues LEIYKQKLDEISSKELNSDQKQLAYKILEKFPDKELEYVYQFVVQRIKTGFRFDSAPESDTNTVAILEKDENLSFKSNEN NQNQNTLIIGENYDALKNLLVLERERERERERERATAAGYDIIYIDPPYNTQASFNEGNQIANDKENILPSKFIYRDKYS RNG*LNLLNERLNLAKKLLKDDGIIFVSIDDNQHGYLKVLMDEIFGEENFVANLVWQKKNEGSAADSKFVKVLTEYVLAY SKNIQHLTTNIYVQNINDGSYKFSDEYIQERGKYKLIQLDRASLT*SEGLDYPIEYNGKIYYAGGSQEK*QARHQGNRAV KDWRWR*ARKKLD*GIKNGFIVFKNEKVFSKQYQFVDNNNQKIERVSKFSNLILLAQGTEGTQEQKNIFSTKVFDHPKPI ELIKYLINIHPNKNAKILDFFAGSGTTGHAV*ELNRQDGGNRIFTLVTNNQNNIATNITYERLFRINHGFGTKKEQNFDW IKKNQPYKTNLDVFRINYFNTEILNKENDVNLLVKKLEKMLVDFGISSKNNINLIEYLNYLLALLPQKKNKK >Mature_552_residues LEIYKQKLDEISSKELNSDQKQLAYKILEKFPDKELEYVYQFVVQRIKTGFRFDSAPESDTNTVAILEKDENLSFKSNEN NQNQNTLIIGENYDALKNLLVLERERERERERERATAAGYDIIYIDPPYNTQASFNEGNQIANDKENILPSKFIYRDKYS RNG*LNLLNERLNLAKKLLKDDGIIFVSIDDNQHGYLKVLMDEIFGEENFVANLVWQKKNEGSAADSKFVKVLTEYVLAY SKNIQHLTTNIYVQNINDGSYKFSDEYIQERGKYKLIQLDRASLT*SEGLDYPIEYNGKIYYAGGSQEK*QARHQGNRAV KDWRWR*ARKKLD*GIKNGFIVFKNEKVFSKQYQFVDNNNQKIERVSKFSNLILLAQGTEGTQEQKNIFSTKVFDHPKPI ELIKYLINIHPNKNAKILDFFAGSGTTGHAV*ELNRQDGGNRIFTLVTNNQNNIATNITYERLFRINHGFGTKKEQNFDW IKKNQPYKTNLDVFRINYFNTEILNKENDVNLLVKKLEKMLVDFGISSKNNINLIEYLNYLLALLPQKKNKK
Specific function: Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4 [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 63561; Mature: 63561
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure LEIYKQKLDEISSKELNSDQKQLAYKILEKFPDKELEYVYQFVVQRIKTGFRFDSAPESD CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC TNTVAILEKDENLSFKSNENNQNQNTLIIGENYDALKNLLVLERERERERERERATAAGY CCEEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC DIIYIDPPYNTQASFNEGNQIANDKENILPSKFIYRDKYSRNGLNLLNERLNLAKKLLKD EEEEECCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCC DGIIFVSIDDNQHGYLKVLMDEIFGEENFVANLVWQKKNEGSAADSKFVKVLTEYVLAYS CCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH KNIQHLTTNIYVQNINDGSYKFSDEYIQERGKYKLIQLDRASLTSEGLDYPIEYNGKIYY CCCEEEEEEEEEEECCCCCEEECHHHHHCCCCEEEEEECCHHHCCCCCCCCEEECCEEEE AGGSQEKQARHQGNRAVKDWRWRARKKLDGIKNGFIVFKNEKVFSKQYQFVDNNNQKIER CCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHH VSKFSNLILLAQGTEGTQEQKNIFSTKVFDHPKPIELIKYLINIHPNKNAKILDFFAGSG HHHHCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCC TTGHAVELNRQDGGNRIFTLVTNNQNNIATNITYERLFRINHGFGTKKEQNFDWIKKNQP CCCCEEEEECCCCCCEEEEEEECCCCCEEECCCHHHHHEEECCCCCCCCCCCCHHHCCCC YKTNLDVFRINYFNTEILNKENDVNLLVKKLEKMLVDFGISSKNNINLIEYLNYLLALLP CCCCCEEEEEEEECHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC QKKNKK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8387444; 11677609 [H]