Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893705
Identifier: 71893705
GI number: 71893705
Start: 429120
End: 429650
Strand: Reverse
Name: 71893705
Synonym: MHJ_0352
Alternate gene names: NA
Gene position: 429650-429120 (Counterclockwise)
Preceding gene: 71893707
Following gene: 71893704
Centisome position: 47.88
GC content: 24.86
Gene sequence:
>531_bases ATGAAAAAATCACTAAAATATTTGTTAATCTTAAGCACATTAAGTCCTTTTTTAGTTCTAAGTTGTAATGATAAAATTGA TTCTAAAAAGAATATTACCAAAAAAACTGAAGAAAAACAGGAGGCAAATAGCTTAGACCAAGAAAAGAAAGAACAAGAAA ATAAAATTTTACCTGAACTTGAAAAAAATCAAGAAAAAGAAAAATCTAGTCTTGATTTTTTTCAAATTAATCAAAATTCA CTAAAAATTAATACTAATTCACTATCACAAACTAATCAAACTGATTTTAAAGAATTAGATCCAAGTCAGACTGATAAAAA CTCCTTAGAGCCAATACCTCCAGTTTATAATAAATATCAGCTTAAAAATTGGGAAAATGTTATAAGAAAAGAAAATCAAA CTACTTTTTTAGGTCAAGAAAGCGAAAATTTAAATATTTATTTACTAAAAAATACAGAACATATTTCAGTTAGCGATATT AGAGCCCAAAAAAATCCTTTTACGTATTTTAATTTATCTTGGGGGGGATAG
Upstream 100 bases:
>100_bases TGTAAATTTAATTTTAATTATTAATAAAAAAATATTATAATATAAAATTAAAATAATATTTAAAAAATTTAAATTTTTTA TTTTAAAGGGGTTCTAAAAT
Downstream 100 bases:
>100_bases AATCTAGATTATATAAACTCCCTTGATTTGGTTTTAGATCTGATTCACTTGAAGAGACAAAATACGCTGATATTTTCACA AGAAATATCCGTTTTGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKKSLKYLLILSTLSPFLVLSCNDKIDSKKNITKKTEEKQEANSLDQEKKEQENKILPELEKNQEKEKSSLDFFQINQNS LKINTNSLSQTNQTDFKELDPSQTDKNSLEPIPPVYNKYQLKNWENVIRKENQTTFLGQESENLNIYLLKNTEHISVSDI RAQKNPFTYFNLSWGG
Sequences:
>Translated_176_residues MKKSLKYLLILSTLSPFLVLSCNDKIDSKKNITKKTEEKQEANSLDQEKKEQENKILPELEKNQEKEKSSLDFFQINQNS LKINTNSLSQTNQTDFKELDPSQTDKNSLEPIPPVYNKYQLKNWENVIRKENQTTFLGQESENLNIYLLKNTEHISVSDI RAQKNPFTYFNLSWGG >Mature_176_residues MKKSLKYLLILSTLSPFLVLSCNDKIDSKKNITKKTEEKQEANSLDQEKKEQENKILPELEKNQEKEKSSLDFFQINQNS LKINTNSLSQTNQTDFKELDPSQTDKNSLEPIPPVYNKYQLKNWENVIRKENQTTFLGQESENLNIYLLKNTEHISVSDI RAQKNPFTYFNLSWGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20535; Mature: 20535
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLKYLLILSTLSPFLVLSCNDKIDSKKNITKKTEEKQEANSLDQEKKEQENKILPEL CCCCHHHHHHEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH EKNQEKEKSSLDFFQINQNSLKINTNSLSQTNQTDFKELDPSQTDKNSLEPIPPVYNKYQ HHHHHHHHHCCCEEEECCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHH LKNWENVIRKENQTTFLGQESENLNIYLLKNTEHISVSDIRAQKNPFTYFNLSWGG CCCHHHHHHCCCCEEEECCCCCCEEEEEEECCCEEEHHHHHCCCCCCEEEEEECCC >Mature Secondary Structure MKKSLKYLLILSTLSPFLVLSCNDKIDSKKNITKKTEEKQEANSLDQEKKEQENKILPEL CCCCHHHHHHEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH EKNQEKEKSSLDFFQINQNSLKINTNSLSQTNQTDFKELDPSQTDKNSLEPIPPVYNKYQ HHHHHHHHHCCCEEEECCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHH LKNWENVIRKENQTTFLGQESENLNIYLLKNTEHISVSDIRAQKNPFTYFNLSWGG CCCHHHHHHCCCCEEEECCCCCCEEEEEEECCCEEEHHHHHCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA