Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893698
Identifier: 71893698
GI number: 71893698
Start: 419702
End: 420691
Strand: Reverse
Name: 71893698
Synonym: MHJ_0345
Alternate gene names: NA
Gene position: 420691-419702 (Counterclockwise)
Preceding gene: 71893699
Following gene: 71893697
Centisome position: 46.88
GC content: 21.01
Gene sequence:
>990_bases ATAAAATTTGTAAATATTATGCATCCTTGTTTTGTAATTTCTAAATTTGATTTTAACAAAAATGATTTAAATAACTTGTT ATACTTTTATTATCCGATTATTGGATCGCAATGCTCTACATTATTTCGATACCTTTTAAGTATTAAAAATGTTGATGAGA CAGTGGATTATGAATTTTTAGAAAAAATTTTTGAAATTAATTTTGAAAATTTTAATAAAAATCGGGAAATTTTAGAATCA CTAAATTTGATTGAAACATTTTATGATTCTGAACAAAAAAAATATTTTATTAATTTAAAGGCTCCATTGAATTCAAATCA AATCGATAAAAATCCATATCTTAAATCATTAATTGTTCAAAAAATAACATTATCCACATATACAAATTTAATTCAAAAAT TTAAAAATACACAAAAAATTAGTAAAAATAAGCAAATTGATACATTAAATTTACGTAATCTTTCAAAAAAATTTTATGAA CTCTTTGAGTTGAATAGCGAAAAAATTAATAATTTACTTACTTTTCCAGAAGATTTTGATAATGAAAAAGCAAAAAAAGG CTTGGATTTTGAGGACTATCATCTATATCTAGCAAAAAAAATAATACGACCACGGGTGCGAAATGCATTAAAAGCATACC AAAATGAAAGGAATTTTTCAAATTATGCAATTAACTGTGTAATTGATTATTGTTATAAAACTAATAATCAAATAATTTTT AATTATATGAAAAAAATTCTTGATGATTTATGAGATAATAAAATAATTAATGGGAAAGATGTTGAAATTGAATTAAAAGA AATTTTTAAACAGAAACAGAAAAATAGTCAAAAATTACTTATTTTGAAAAACAAAAATAATTTAGTTTACATCGAAGATG AAAAACAACTTGAAAAAAATAGTAAATTTTCAAATTTAGAAACAAAAAATAATTTAGGGGAAATTGACTGAATTGTTGAT GAATTAAATTCAGGTGAAGGTTGACTCTAA
Upstream 100 bases:
>100_bases ACACGGGCAAAATTCAATTTTACGATGTCAAAATCTCCAATCGAAAATGGAAAAAACCGGGATTTTTCCTAAAATTTTTT TCTAAAATTTTTAAATAATA
Downstream 100 bases:
>100_bases AGAAAAAAATATTAAATTATCAAATTTGTATTAATTTAGTTTTTTATAAGGTAAATTTTTAATGCAATTATAGCGTATTT TTAACTAATAAAAAAACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKFVNIMHPCFVISKFDFNKNDLNNLLYFYYPIIGSQCSTLFRYLLSIKNVDETVDYEFLEKIFEINFENFNKNREILES LNLIETFYDSEQKKYFINLKAPLNSNQIDKNPYLKSLIVQKITLSTYTNLIQKFKNTQKISKNKQIDTLNLRNLSKKFYE LFELNSEKINNLLTFPEDFDNEKAKKGLDFEDYHLYLAKKIIRPRVRNALKAYQNERNFSNYAINCVIDYCYKTNNQIIF NYMKKILDDLWDNKIINGKDVEIELKEIFKQKQKNSQKLLILKNKNNLVYIEDEKQLEKNSKFSNLETKNNLGEIDWIVD ELNSGEGWL
Sequences:
>Translated_329_residues MKFVNIMHPCFVISKFDFNKNDLNNLLYFYYPIIGSQCSTLFRYLLSIKNVDETVDYEFLEKIFEINFENFNKNREILES LNLIETFYDSEQKKYFINLKAPLNSNQIDKNPYLKSLIVQKITLSTYTNLIQKFKNTQKISKNKQIDTLNLRNLSKKFYE LFELNSEKINNLLTFPEDFDNEKAKKGLDFEDYHLYLAKKIIRPRVRNALKAYQNERNFSNYAINCVIDYCYKTNNQIIF NYMKKILDDL*DNKIINGKDVEIELKEIFKQKQKNSQKLLILKNKNNLVYIEDEKQLEKNSKFSNLETKNNLGEID*IVD ELNSGEG*L >Mature_329_residues MKFVNIMHPCFVISKFDFNKNDLNNLLYFYYPIIGSQCSTLFRYLLSIKNVDETVDYEFLEKIFEINFENFNKNREILES LNLIETFYDSEQKKYFINLKAPLNSNQIDKNPYLKSLIVQKITLSTYTNLIQKFKNTQKISKNKQIDTLNLRNLSKKFYE LFELNSEKINNLLTFPEDFDNEKAKKGLDFEDYHLYLAKKIIRPRVRNALKAYQNERNFSNYAINCVIDYCYKTNNQIIF NYMKKILDDL*DNKIINGKDVEIELKEIFKQKQKNSQKLLILKNKNNLVYIEDEKQLEKNSKFSNLETKNNLGEID*IVD ELNSGEG*L
Specific function: Unknown
COG id: COG3611
COG function: function code L; Replication initiation/membrane attachment protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38782; Mature: 38782
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVNIMHPCFVISKFDFNKNDLNNLLYFYYPIIGSQCSTLFRYLLSIKNVDETVDYEFL CCCHHHHCHHHEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHH EKIFEINFENFNKNREILESLNLIETFYDSEQKKYFINLKAPLNSNQIDKNPYLKSLIVQ HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHH KITLSTYTNLIQKFKNTQKISKNKQIDTLNLRNLSKKFYELFELNSEKINNLLTFPEDFD HHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC NEKAKKGLDFEDYHLYLAKKIIRPRVRNALKAYQNERNFSNYAINCVIDYCYKTNNQIIF CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHEEEEEHHHCCCCHHH NYMKKILDDLDNKIINGKDVEIELKEIFKQKQKNSQKLLILKNKNNLVYIEDEKQLEKNS HHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCEEEEECHHHHHHCC KFSNLETKNNLGEIDIVDELNSGEGL CCCCCCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure MKFVNIMHPCFVISKFDFNKNDLNNLLYFYYPIIGSQCSTLFRYLLSIKNVDETVDYEFL CCCHHHHCHHHEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHH EKIFEINFENFNKNREILESLNLIETFYDSEQKKYFINLKAPLNSNQIDKNPYLKSLIVQ HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHH KITLSTYTNLIQKFKNTQKISKNKQIDTLNLRNLSKKFYELFELNSEKINNLLTFPEDFD HHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC NEKAKKGLDFEDYHLYLAKKIIRPRVRNALKAYQNERNFSNYAINCVIDYCYKTNNQIIF CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHEEEEEHHHCCCCHHH NYMKKILDDLDNKIINGKDVEIELKEIFKQKQKNSQKLLILKNKNNLVYIEDEKQLEKNS HHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCEEEEECHHHHHHCC KFSNLETKNNLGEIDIVDELNSGEGL CCCCCCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA