Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893689
Identifier: 71893689
GI number: 71893689
Start: 409435
End: 410103
Strand: Reverse
Name: 71893689
Synonym: MHJ_0335
Alternate gene names: NA
Gene position: 410103-409435 (Counterclockwise)
Preceding gene: 71893690
Following gene: 71893688
Centisome position: 45.7
GC content: 31.99
Gene sequence:
>669_bases ATGTTCTTTACAAAAAAAATAAAAAAAATTTTACTAAACTTAACAGCATTAACAAGTTTAACGCTTGCAGTCACAACACC GGCAATTGTTGCTAGTCAAAAAATAAATGCGAAGGGTTTTTTATTGTTTCCAGGAATTGCGCTTTTAGCAAACGAAAATA ATGTAGTACAACTTGCTCAAAGATATGATAAAGACTATTATTTCGGAATATCATTAATAGGCCACCAACATTTATCATAT TATGGCGGTTGATTTTATCAAGACAAAATTTCATGAACTGGAAAAGCAAGAACAAAATTTAGACCAAGAAATTCATATTA TTCTAACCCGGACAAATTAGAATTAAAGGTGACATCTTGAATTTCTGGAATGGGAAGTCCTTCGTTTTCAGTAGGAGGAG AAATAAAATACGATGGTAAATTTTCGGCTAAGGCAAGTGCAAATACAGGTGTTTCCATTGACTCAAATGGATATCTGGTT GACTCAATTACCGATTATAATCATAGATATGCAGGAATAGATTATGATTTTCATGGTTGAAAATACAAAGTAACGACCTT TGGTAGTTCAGCGTCTGCACATGCCAAATATAAATATAAAACTGCAAGTATATTGTCTGATTCTTCTTATCATAGAGTTT CATGATTGTCCGAAAGTTTAGAAGAATAG
Upstream 100 bases:
>100_bases TTTTAACAAAAATTATATTTTTGTATTTTTCTTGTTTTTGTTCTTTGTTATTTAATTTAGCATAATATAATTATGAGTAA AAATTTGCTAAGGATATTTT
Downstream 100 bases:
>100_bases GTATGATACCTAAAATTTTTACAAAAAAATGAGTTATTTTTTCTATTATTGGCGCTAGTTTGGGATCAATTGCTATAAGT GTGCCATTAATTTATTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MFFTKKIKKILLNLTALTSLTLAVTTPAIVASQKINAKGFLLFPGIALLANENNVVQLAQRYDKDYYFGISLIGHQHLSY YGGWFYQDKISWTGKARTKFRPRNSYYSNPDKLELKVTSWISGMGSPSFSVGGEIKYDGKFSAKASANTGVSIDSNGYLV DSITDYNHRYAGIDYDFHGWKYKVTTFGSSASAHAKYKYKTASILSDSSYHRVSWLSESLEE
Sequences:
>Translated_222_residues MFFTKKIKKILLNLTALTSLTLAVTTPAIVASQKINAKGFLLFPGIALLANENNVVQLAQRYDKDYYFGISLIGHQHLSY YGG*FYQDKIS*TGKARTKFRPRNSYYSNPDKLELKVTS*ISGMGSPSFSVGGEIKYDGKFSAKASANTGVSIDSNGYLV DSITDYNHRYAGIDYDFHG*KYKVTTFGSSASAHAKYKYKTASILSDSSYHRVS*LSESLEE >Mature_222_residues MFFTKKIKKILLNLTALTSLTLAVTTPAIVASQKINAKGFLLFPGIALLANENNVVQLAQRYDKDYYFGISLIGHQHLSY YGG*FYQDKIS*TGKARTKFRPRNSYYSNPDKLELKVTS*ISGMGSPSFSVGGEIKYDGKFSAKASANTGVSIDSNGYLV DSITDYNHRYAGIDYDFHG*KYKVTTFGSSASAHAKYKYKTASILSDSSYHRVS*LSESLEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23885; Mature: 23885
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFTKKIKKILLNLTALTSLTLAVTTPAIVASQKINAKGFLLFPGIALLANENNVVQLAQ CCHHHHHHHHHHHHHHHHEEEEEEECCCEEECCCCCCCEEEEECCEEEEECCCCEEHHHH RYDKDYYFGISLIGHQHLSYYGGFYQDKISTGKARTKFRPRNSYYSNPDKLELKVTSISG HCCCCEEEEEEEECCHHHHHHCCEEEHHCCCCCCCCEECCCCCCCCCCCEEEEEEEEECC MGSPSFSVGGEIKYDGKFSAKASANTGVSIDSNGYLVDSITDYNHRYAGIDYDFHGKYKV CCCCCCCCCCEEEECCCEECCCCCCCCEEECCCCEEEEEEECCCCEEECCCCCCCCCEEE TTFGSSASAHAKYKYKTASILSDSSYHRVSLSESLEE EEECCCCCCCEEEEEEEEEEECCCCCEEEEHHHHHCC >Mature Secondary Structure MFFTKKIKKILLNLTALTSLTLAVTTPAIVASQKINAKGFLLFPGIALLANENNVVQLAQ CCHHHHHHHHHHHHHHHHEEEEEEECCCEEECCCCCCCEEEEECCEEEEECCCCEEHHHH RYDKDYYFGISLIGHQHLSYYGGFYQDKISTGKARTKFRPRNSYYSNPDKLELKVTSISG HCCCCEEEEEEEECCHHHHHHCCEEEHHCCCCCCCCEECCCCCCCCCCCEEEEEEEEECC MGSPSFSVGGEIKYDGKFSAKASANTGVSIDSNGYLVDSITDYNHRYAGIDYDFHGKYKV CCCCCCCCCCEEEECCCEECCCCCCCCEEECCCCEEEEEEECCCCEEECCCCCCCCCEEE TTFGSSASAHAKYKYKTASILSDSSYHRVSLSESLEE EEECCCCCCCEEEEEEEEEEECCCCCEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA