Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893675
Identifier: 71893675
GI number: 71893675
Start: 389055
End: 389984
Strand: Reverse
Name: 71893675
Synonym: MHJ_0321
Alternate gene names: NA
Gene position: 389984-389055 (Counterclockwise)
Preceding gene: 71893676
Following gene: 71893674
Centisome position: 43.46
GC content: 21.18
Gene sequence:
>930_bases ATGAATTTTTGATTAACAGTTGAAAAATTTATAAACCTTCAAATACCGAAAAAATTTTTAAAAATTCCTATTTTAAGTAA TACTTTGTATTTTAAACTATTTTCATTTTTAGTTTTTAAATTTAATCCTGATAAAAAAACAATAAAAAATTACTTTTTAT TTGTAGTACTTTCTTTAATAAGTTATCCGACTCCTCTTTTTTTAATTATAATAATATTGTTAATTACCGATAATGCTGAT TTTCTAAGGAATTTAGATTTAAAATTTTTTAATAATTATTTTATTCGGCATTTGATCGAAGTAATTGGCTACTCGTTTTT AATTCTGCCTTATTCTTATTTTTCAGGTTTTCTTCAAAAAATTTTTCATTTATACTTGGTAAAACAAGTTAAAAAAAATC TTGGCAAGTTGGACGCAAATAATAAATTCCCATTTTTAAACAATTTTAATTATACTAAATATTATGAATTTCTATGTCAA CGAAAATTTTATATTGGTATTGAAAAAAAACATTGGTATAATCCAGAAAAAATAATTGAAAATATTTTTATCTATATCCA ATATTGATGGTGAGTAATTAATTGAAATTTGCCAAAATATTTTGCACATATAATTTTGGAAGTTTTTTTGTTTAACACTA CTGAATTTACAAATTCAAATATTCCTAAAAAAAACTGGAAAATCTTTTTATACATTTATTTTGCTTTTGTTTTTATACAT CTTATACTAACTTGATATCCGTTTTGAATAATATCTTATTTTATAATGGAACATATATCTGAAGTAGATGGCAATTTAAA TGATACTAATAACGAAACAATACAATTATTACTCTCTAGTTTTTCTACTATATTTTTTGGTTATATCACGATACCCTGGG TGGCTTATTATCCTAAATTATGAATAACTTTTTGACTATTTGAAGAATAA
Upstream 100 bases:
>100_bases ATCACTGCAAGTTTAGTTGCGCCGCAAGTTAGAATTGCCTTGATTTGGCTTGATGTTTTGCAGTCTTTTGTTTCCTTAAT TATGGAGTTTATACCTTAAA
Downstream 100 bases:
>100_bases ATTTTTGATTTTTTTGATAGTATTATTAAAGACAAAATGTTTGATTCTTAGACTTGTTTAACCAGTTTATTAATTTAATT CAAGGAAATTTGTTTTGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MNFWLTVEKFINLQIPKKFLKIPILSNTLYFKLFSFLVFKFNPDKKTIKNYFLFVVLSLISYPTPLFLIIIILLITDNAD FLRNLDLKFFNNYFIRHLIEVIGYSFLILPYSYFSGFLQKIFHLYLVKQVKKNLGKLDANNKFPFLNNFNYTKYYEFLCQ RKFYIGIEKKHWYNPEKIIENIFIYIQYWWWVINWNLPKYFAHIILEVFLFNTTEFTNSNIPKKNWKIFLYIYFAFVFIH LILTWYPFWIISYFIMEHISEVDGNLNDTNNETIQLLLSSFSTIFFGYITIPWVAYYPKLWITFWLFEE
Sequences:
>Translated_309_residues MNF*LTVEKFINLQIPKKFLKIPILSNTLYFKLFSFLVFKFNPDKKTIKNYFLFVVLSLISYPTPLFLIIIILLITDNAD FLRNLDLKFFNNYFIRHLIEVIGYSFLILPYSYFSGFLQKIFHLYLVKQVKKNLGKLDANNKFPFLNNFNYTKYYEFLCQ RKFYIGIEKKHWYNPEKIIENIFIYIQY*W*VIN*NLPKYFAHIILEVFLFNTTEFTNSNIPKKNWKIFLYIYFAFVFIH LILT*YPF*IISYFIMEHISEVDGNLNDTNNETIQLLLSSFSTIFFGYITIPWVAYYPKL*ITF*LFEE >Mature_309_residues MNF*LTVEKFINLQIPKKFLKIPILSNTLYFKLFSFLVFKFNPDKKTIKNYFLFVVLSLISYPTPLFLIIIILLITDNAD FLRNLDLKFFNNYFIRHLIEVIGYSFLILPYSYFSGFLQKIFHLYLVKQVKKNLGKLDANNKFPFLNNFNYTKYYEFLCQ RKFYIGIEKKHWYNPEKIIENIFIYIQY*W*VIN*NLPKYFAHIILEVFLFNTTEFTNSNIPKKNWKIFLYIYFAFVFIH LILT*YPF*IISYFIMEHISEVDGNLNDTNNETIQLLLSSFSTIFFGYITIPWVAYYPKL*ITF*LFEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36320; Mature: 36320
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFLTVEKFINLQIPKKFLKIPILSNTLYFKLFSFLVFKFNPDKKTIKNYFLFVVLSLIS CCCEEHHHHHCCCCCHHHHHCCHHCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH YPTPLFLIIIILLITDNADFLRNLDLKFFNNYFIRHLIEVIGYSFLILPYSYFSGFLQKI CCHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FHLYLVKQVKKNLGKLDANNKFPFLNNFNYTKYYEFLCQRKFYIGIEKKHWYNPEKIIEN HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECHHHCCCHHHHHHH IFIYIQYWVINNLPKYFAHIILEVFLFNTTEFTNSNIPKKNWKIFLYIYFAFVFIHLILT HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YPFIISYFIMEHISEVDGNLNDTNNETIQLLLSSFSTIFFGYITIPWVAYYPKLITFLFE HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC E C >Mature Secondary Structure MNFLTVEKFINLQIPKKFLKIPILSNTLYFKLFSFLVFKFNPDKKTIKNYFLFVVLSLIS CCCEEHHHHHCCCCCHHHHHCCHHCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH YPTPLFLIIIILLITDNADFLRNLDLKFFNNYFIRHLIEVIGYSFLILPYSYFSGFLQKI CCHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FHLYLVKQVKKNLGKLDANNKFPFLNNFNYTKYYEFLCQRKFYIGIEKKHWYNPEKIIEN HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECHHHCCCHHHHHHH IFIYIQYWVINNLPKYFAHIILEVFLFNTTEFTNSNIPKKNWKIFLYIYFAFVFIHLILT HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YPFIISYFIMEHISEVDGNLNDTNNETIQLLLSSFSTIFFGYITIPWVAYYPKLITFLFE HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA