Click here to switch to the map view.

The map label for this gene is 71893627

Identifier: 71893627

GI number: 71893627

Start: 324934

End: 325752

Strand: Reverse

Name: 71893627

Synonym: MHJ_0271

Alternate gene names: NA

Gene position: 325752-324934 (Counterclockwise)

Preceding gene: 71893629

Following gene: 71893620

Centisome position: 36.3

GC content: 27.72

Gene sequence:

>819_bases
ATTATGAGTGTTCTAACCATTTCAAAAAATTTTAAATTAACTCACATTGAAAAATTAATTATCCGATTTATTGAAACAAA
ACCACGAAAATTTGTTGAGCAAACTATCAATGAACTTGCATCAACCTTATTTATAAGTGTCGGAACAATTACACAATTAA
CAAAAAAGCTTGGATTTAACAATTTCAAAGAATTAAAAAAATTCGTAATTGAATGACTTAAGCTTGATGAGGATAATAAT
TTATATAACGAAAACGACCAAATTGAAAATATTAACCTGCTTTATGTACACAGTATCGAGAAAACACTAGCAATTCTTAA
TGTTTCGCAAATTAATCGAATTGTTGATACTGTTCTTAAAATGGATAAAATTATTACTTATGGCACAGCCTCTTCAATAA
CTGTTGCTACAGAATTTTCAAATAATCTTAGAAATTTACACCTTAATAGCCTATGCGCAAAAAATATTTCCGATATTGCC
TCATGGATTGGCAATCCTGGTAGTACTTGCCTCGTTATTTTTTCGGTTTCAATGGCTTCTCGCGATGCAGTTGCGCTTAC
TAAATTGGCAAAACAACACCAAATAAACACCATTTTTATAACTTCAAATACAAATTTGGAAAAGAATTCATTCTCAGAAG
TAGTTTATTTTGATACTTTAGAACAAAATAATAGTATTTTTCCAGTTGGTTCTAAAGTATCACAACTTTTTATTGGTGAT
CTAATTTCGTTAAAAATTCGAAAAAAATTAAATAGTTCTCGTTCAGAATTTTTTAATGAATTTAGACGTCTTTGGTATAA
AAAAATTAAAAATCATTAA

Upstream 100 bases:

>100_bases
TTAATTCCTATAAAAGTTAAGTATATTTTAATTTTTTAATATTTTAAAAATTTTTAAGATTTTTTTTTAAAAATTTTTAA
AAATAGTGTAAAATTGTTAA

Downstream 100 bases:

>100_bases
TTTTTTTTATAATTTTTTAGAAAAAAATCTTTAGCAATTTCTATATCATCATTTCTGAGATTATTAGTATGGTTTGAATA
AATATAACGAATTTGCTTAA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MMSVLTISKNFKLTHIEKLIIRFIETKPRKFVEQTINELASTLFISVGTITQLTKKLGFNNFKELKKFVIEWLKLDEDNN
LYNENDQIENINLLYVHSIEKTLAILNVSQINRIVDTVLKMDKIITYGTASSITVATEFSNNLRNLHLNSLCAKNISDIA
SWIGNPGSTCLVIFSVSMASRDAVALTKLAKQHQINTIFITSNTNLEKNSFSEVVYFDTLEQNNSIFPVGSKVSQLFIGD
LISLKIRKKLNSSRSEFFNEFRRLWYKKIKNH

Sequences:

>Translated_272_residues
MMSVLTISKNFKLTHIEKLIIRFIETKPRKFVEQTINELASTLFISVGTITQLTKKLGFNNFKELKKFVIE*LKLDEDNN
LYNENDQIENINLLYVHSIEKTLAILNVSQINRIVDTVLKMDKIITYGTASSITVATEFSNNLRNLHLNSLCAKNISDIA
SWIGNPGSTCLVIFSVSMASRDAVALTKLAKQHQINTIFITSNTNLEKNSFSEVVYFDTLEQNNSIFPVGSKVSQLFIGD
LISLKIRKKLNSSRSEFFNEFRRLWYKKIKNH
>Mature_272_residues
MMSVLTISKNFKLTHIEKLIIRFIETKPRKFVEQTINELASTLFISVGTITQLTKKLGFNNFKELKKFVIE*LKLDEDNN
LYNENDQIENINLLYVHSIEKTLAILNVSQINRIVDTVLKMDKIITYGTASSITVATEFSNNLRNLHLNSLCAKNISDIA
SWIGNPGSTCLVIFSVSMASRDAVALTKLAKQHQINTIFITSNTNLEKNSFSEVVYFDTLEQNNSIFPVGSKVSQLFIGD
LISLKIRKKLNSSRSEFFNEFRRLWYKKIKNH

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30988; Mature: 30988

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSVLTISKNFKLTHIEKLIIRFIETKPRKFVEQTINELASTLFISVGTITQLTKKLGFN
CCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NFKELKKFVIELKLDEDNNLYNENDQIENINLLYVHSIEKTLAILNVSQINRIVDTVLKM
CHHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHH
DKIITYGTASSITVATEFSNNLRNLHLNSLCAKNISDIASWIGNPGSTCLVIFSVSMASR
HHHHEECCCCCEEEEEHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCCC
DAVALTKLAKQHQINTIFITSNTNLEKNSFSEVVYFDTLEQNNSIFPVGSKVSQLFIGDL
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCEECCCHHHHHHHHHHH
ISLKIRKKLNSSRSEFFNEFRRLWYKKIKNH
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMSVLTISKNFKLTHIEKLIIRFIETKPRKFVEQTINELASTLFISVGTITQLTKKLGFN
CCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NFKELKKFVIELKLDEDNNLYNENDQIENINLLYVHSIEKTLAILNVSQINRIVDTVLKM
CHHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHH
DKIITYGTASSITVATEFSNNLRNLHLNSLCAKNISDIASWIGNPGSTCLVIFSVSMASR
HHHHEECCCCCEEEEEHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCCC
DAVALTKLAKQHQINTIFITSNTNLEKNSFSEVVYFDTLEQNNSIFPVGSKVSQLFIGDL
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCEECCCHHHHHHHHHHH
ISLKIRKKLNSSRSEFFNEFRRLWYKKIKNH
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA