Click here to switch to the map view.

The map label for this gene is smf [H]

Identifier: 71893597

GI number: 71893597

Start: 289865

End: 290644

Strand: Reverse

Name: smf [H]

Synonym: MHJ_0241

Alternate gene names: 71893597

Gene position: 290644-289865 (Counterclockwise)

Preceding gene: 71893601

Following gene: 71893596

Centisome position: 32.39

GC content: 27.82

Gene sequence:

>780_bases
ATGAAGAGCAGTCTAATTTACTATGCCATTAAATATAAAGGAGATTATAAATTAATCCAGAATGCTATCCAAACAAAAGA
GGAAATAACAAAAGAAGAATTTTTAAAACTTCAAGAAAAACTTGATTCAGGAAAAATAAAAGCAATTACAATATTAGATG
AAAACTATCCTGAAGCCTTTCAAGTACTAAAAAATCCGCCTTATGTTCTATTTTATCAAGGTAAAATTGAATTTCTTGAA
AATAAAAATCCAAAAAGCGCGCTTATTGGCGAAAAATATAATAGTAAAATTCAGGAATTTTTTAACAAATCATTAGATCA
AATTATCAAGCGTCATATTTTAGTTACAAACGGTTATAAAGGTGTTGAGCAAAAAATAATGGAATATTACCGATTATATG
AAGCACCTATTATCGCTGTTTCGGCAAATGGGATAAAAAATCCATGACCTTTTGAGAATTTTCAGGATTATAAAAATATT
TTAATTATCTCTGAATATCCAACAGGATGCAATGTTAATAAAAAAAGATTAATTGAAAGGAACCGTTTAATTGCAGCGCT
TGCTAATTTTTTAGTTGTCTATTCAATTCGGAAATCAGGTGGATCACAAAATTTAGTTAACTATTTTCTTGATTTTGGTA
AGGAAATTTATTGCTTTTTTGATAAAAATGATGAAGATCAACTCGATTATACAGGTTGTTCTGATCTAATTTATCAAGGC
GCAAATTGAATTACCGAAATAAAAGATGTCTATTATGAGAGTCAAACTAGAGGAGAATAA

Upstream 100 bases:

>100_bases
TTGATTTCAAAAAAAAGACATAAAAAAACTTTTTATGTTAAAAGTTTTTTTTATTAAATAAAAACTAAATTTTCTTAATT
TATAAATGAAAGGAAGGGAA

Downstream 100 bases:

>100_bases
TGTATATTTTAAGTTTATTTGAGGATGTCCAAGTGGGTGCAGAGCTATCAACATTAGCTACCACTTTACAAAAATGAATA
AAATATCTAACACAGATCGG

Product: DNA processing protein SMF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKSSLIYYAIKYKGDYKLIQNAIQTKEEITKEEFLKLQEKLDSGKIKAITILDENYPEAFQVLKNPPYVLFYQGKIEFLE
NKNPKSALIGEKYNSKIQEFFNKSLDQIIKRHILVTNGYKGVEQKIMEYYRLYEAPIIAVSANGIKNPWPFENFQDYKNI
LIISEYPTGCNVNKKRLIERNRLIAALANFLVVYSIRKSGGSQNLVNYFLDFGKEIYCFFDKNDEDQLDYTGCSDLIYQG
ANWITEIKDVYYESQTRGE

Sequences:

>Translated_259_residues
MKSSLIYYAIKYKGDYKLIQNAIQTKEEITKEEFLKLQEKLDSGKIKAITILDENYPEAFQVLKNPPYVLFYQGKIEFLE
NKNPKSALIGEKYNSKIQEFFNKSLDQIIKRHILVTNGYKGVEQKIMEYYRLYEAPIIAVSANGIKNP*PFENFQDYKNI
LIISEYPTGCNVNKKRLIERNRLIAALANFLVVYSIRKSGGSQNLVNYFLDFGKEIYCFFDKNDEDQLDYTGCSDLIYQG
AN*ITEIKDVYYESQTRGE
>Mature_259_residues
MKSSLIYYAIKYKGDYKLIQNAIQTKEEITKEEFLKLQEKLDSGKIKAITILDENYPEAFQVLKNPPYVLFYQGKIEFLE
NKNPKSALIGEKYNSKIQEFFNKSLDQIIKRHILVTNGYKGVEQKIMEYYRLYEAPIIAVSANGIKNP*PFENFQDYKNI
LIISEYPTGCNVNKKRLIERNRLIAALANFLVVYSIRKSGGSQNLVNYFLDFGKEIYCFFDKNDEDQLDYTGCSDLIYQG
AN*ITEIKDVYYESQTRGE

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 29902; Mature: 29902

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSLIYYAIKYKGDYKLIQNAIQTKEEITKEEFLKLQEKLDSGKIKAITILDENYPEAF
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHH
QVLKNPPYVLFYQGKIEFLENKNPKSALIGEKYNSKIQEFFNKSLDQIIKRHILVTNGYK
HHHCCCCEEEEECCEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCC
GVEQKIMEYYRLYEAPIIAVSANGIKNPPFENFQDYKNILIISEYPTGCNVNKKRLIERN
HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHCCEEEEECCCCCCCCCHHHHHHHH
RLIAALANFLVVYSIRKSGGSQNLVNYFLDFGKEIYCFFDKNDEDQLDYTGCSDLIYQGA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHCCC
NITEIKDVYYESQTRGE
CCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKSSLIYYAIKYKGDYKLIQNAIQTKEEITKEEFLKLQEKLDSGKIKAITILDENYPEAF
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHH
QVLKNPPYVLFYQGKIEFLENKNPKSALIGEKYNSKIQEFFNKSLDQIIKRHILVTNGYK
HHHCCCCEEEEECCEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCC
GVEQKIMEYYRLYEAPIIAVSANGIKNPPFENFQDYKNILIISEYPTGCNVNKKRLIERN
HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHCCEEEEECCCCCCCCCHHHHHHHH
RLIAALANFLVVYSIRKSGGSQNLVNYFLDFGKEIYCFFDKNDEDQLDYTGCSDLIYQGA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHCCC
NITEIKDVYYESQTRGE
CCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]