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The map label for this gene is secB

Identifier: 71892368

GI number: 71892368

Start: 750237

End: 750701

Strand: Reverse

Name: secB

Synonym: BPEN_627

Alternate gene names: 71892368

Gene position: 750701-750237 (Counterclockwise)

Preceding gene: 71892369

Following gene: 71892367

Centisome position: 94.83

GC content: 30.97

Gene sequence:

>465_bases
ATGTTTTTTGTGTTAGAAAGCAACAGTAATAATGTTTTATTTCGTATACAAAGAATTTATATCAAAGATATTTCATTTGA
AGCTCCGAACACTCCTGGAGTGTTTCAAATAAATTGGAATCCAAAAATTAAGGTAGATTTAAATAGTGATGCTAAGAATA
TTCACATTGATATGTACGAAGTGGTATTATGTGTTACTGTTACTGCAAAAATTGAGGACGATACAGCTTTTTTATGTCAA
GTAAAACAAGCTGGAATTTTTAATGTTTCAGGATTAAACAAGACACAAATGATACGTTGTCTTAAAGTGCATTGCCCGAC
GATTTTATTTCCCTATGCCAGCGAATGCGTTAGCAACCAAGTGTCGAGAGGCACTTTCCCTCAACTTAACTTAGATCCAA
TTAATTTCGATATTTTGTTTATTCAGTCCTTACAAAAGAAATATAATGATACACTTAAAATTTAA

Upstream 100 bases:

>100_bases
TTGATACTTTTAAATGATCAGGGTAAATTAGATCTAATCTTAATGAATACAAACAGTTAATAAATTATGATTATTTATTA
AATTTTGTAATGTACTAAGG

Downstream 100 bases:

>100_bases
TATTTTAAAAAATAGTTAGTTTAAATTATTGTGTCTATTAAATACCCTAAATATCCTAACATCACTATTATTGGAGCAGG
TTCCTATGGAACGGCCATAG

Product: molecular chaperone in protein export

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MFFVLESNSNNVLFRIQRIYIKDISFEAPNTPGVFQINWNPKIKVDLNSDAKNIHIDMYEVVLCVTVTAKIEDDTAFLCQ
VKQAGIFNVSGLNKTQMIRCLKVHCPTILFPYASECVSNQVSRGTFPQLNLDPINFDILFIQSLQKKYNDTLKI

Sequences:

>Translated_154_residues
MFFVLESNSNNVLFRIQRIYIKDISFEAPNTPGVFQINWNPKIKVDLNSDAKNIHIDMYEVVLCVTVTAKIEDDTAFLCQ
VKQAGIFNVSGLNKTQMIRCLKVHCPTILFPYASECVSNQVSRGTFPQLNLDPINFDILFIQSLQKKYNDTLKI
>Mature_154_residues
MFFVLESNSNNVLFRIQRIYIKDISFEAPNTPGVFQINWNPKIKVDLNSDAKNIHIDMYEVVLCVTVTAKIEDDTAFLCQ
VKQAGIFNVSGLNKTQMIRCLKVHCPTILFPYASECVSNQVSRGTFPQLNLDPINFDILFIQSLQKKYNDTLKI

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family

Homologues:

Organism=Escherichia coli, GI1790038, Length=145, Percent_Identity=56.551724137931, Blast_Score=190, Evalue=4e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECB_BLOPB (Q491X9)

Other databases:

- EMBL:   CP000016
- RefSeq:   YP_278102.1
- ProteinModelPortal:   Q491X9
- SMR:   Q491X9
- STRING:   Q491X9
- GeneID:   3563235
- GenomeReviews:   CP000016_GR
- KEGG:   bpn:BPEN_627
- eggNOG:   COG1952
- HOGENOM:   HBG294212
- OMA:   GFPPLMI
- BioCyc:   CBLO291272:BPEN_627-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00821
- InterPro:   IPR003708
- Gene3D:   G3DSA:3.10.420.10
- PRINTS:   PR01594
- TIGRFAMs:   TIGR00809

Pfam domain/function: PF02556 SecB; SSF54611 SecB

EC number: NA

Molecular weight: Translated: 17624; Mature: 17624

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFVLESNSNNVLFRIQRIYIKDISFEAPNTPGVFQINWNPKIKVDLNSDAKNIHIDMYE
CEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEEEEHHH
VVLCVTVTAKIEDDTAFLCQVKQAGIFNVSGLNKTQMIRCLKVHCPTILFPYASECVSNQ
EEEEEEEEEEECCCCEEEEEEECCCEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHCC
VSRGTFPQLNLDPINFDILFIQSLQKKYNDTLKI
CCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCC
>Mature Secondary Structure
MFFVLESNSNNVLFRIQRIYIKDISFEAPNTPGVFQINWNPKIKVDLNSDAKNIHIDMYE
CEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEEEEHHH
VVLCVTVTAKIEDDTAFLCQVKQAGIFNVSGLNKTQMIRCLKVHCPTILFPYASECVSNQ
EEEEEEEEEEECCCCEEEEEEECCCEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHCC
VSRGTFPQLNLDPINFDILFIQSLQKKYNDTLKI
CCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA