Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is yigL [H]
Identifier: 71892345
GI number: 71892345
Start: 716562
End: 717401
Strand: Reverse
Name: yigL [H]
Synonym: BPEN_596
Alternate gene names: 71892345
Gene position: 717401-716562 (Counterclockwise)
Preceding gene: 71892346
Following gene: 71892343
Centisome position: 90.62
GC content: 32.38
Gene sequence:
>840_bases ATGTTTCGCATCGTTGCGTCTGATTTAGATGGTACTTTGCTAACACCGGACCACCGATTAACGTCTTTTACTAAAAAGAT TCTAAAATTACTAACTACTCGTAATATTCATTTTGTTTTTGCTACTGGCCGACATCATACAAACGTCATGCAAATACGTG ATAATTTGAAAATTAATTCTTATATGATTACTTCTAATGGAGCTAGAATACATAATACCTACGGGAAGTTAATTGCTTCT TACGATTTAGCTACAGAAATTGTAGATGATTTATTACGAGTAGTACATTATGATTCTCAAATTATTACTAATATCTTTTA TAATGATAAGTGGCTGATTAACCGATCAATATCAAAACAAAATTGTTTTTATAACGGATATGAATCTGATTATCATATAT ATCAGAAAGATACATTGCCCTTGCATGGTGTCTGTAAAGTATACTTCACTAGTAATAATTATAAACGACTGTTGTCTTTA GAAAAGAAATTACATGCGCGTTGGAATCATCGAATCAATATTAGTTTTTCGCTTCCTACATGTCTTGAAGTGATGCCGGA AGGAGTTTCAAAGGGACATGCTCTAGAAAGGGTAGTTAAATTACTAGGCTGTCAACTAAAAGATTGTATTTCATTTGGTG ACGGGATGAACGATCAAGAAATGCTAAAAATGGCAGGAAAAGGTTGTATAATGAGCAATGCACAGCAAAGACTGAAAGAT ACCCTGCCATTCTTAGAAATTATTGGCAGCAATAAAGATGATGCAGTACCTCATTATTTACAATGTATGTATCATAATAC ATGGTCTGATTTGTCATTAAGAAATGGTGTTTTAAATTAA
Upstream 100 bases:
>100_bases ATATATAATATATCAATTTTTATTGATATCATGTCATAATATATTGATATAATAATGGTTATTTTTTATTATTTTTAATA AAAACAAAGAGAGGTAATAA
Downstream 100 bases:
>100_bases TATTTTTATTAAAAATATTATGATTTTTAATATTTTTTCATTATTTATTGAATAGTTTGACGAATTTGCTACATGATTTT TTGTGTTCGTATTTATAACT
Product: putative sugar phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MFRIVASDLDGTLLTPDHRLTSFTKKILKLLTTRNIHFVFATGRHHTNVMQIRDNLKINSYMITSNGARIHNTYGKLIAS YDLATEIVDDLLRVVHYDSQIITNIFYNDKWLINRSISKQNCFYNGYESDYHIYQKDTLPLHGVCKVYFTSNNYKRLLSL EKKLHARWNHRINISFSLPTCLEVMPEGVSKGHALERVVKLLGCQLKDCISFGDGMNDQEMLKMAGKGCIMSNAQQRLKD TLPFLEIIGSNKDDAVPHYLQCMYHNTWSDLSLRNGVLN
Sequences:
>Translated_279_residues MFRIVASDLDGTLLTPDHRLTSFTKKILKLLTTRNIHFVFATGRHHTNVMQIRDNLKINSYMITSNGARIHNTYGKLIAS YDLATEIVDDLLRVVHYDSQIITNIFYNDKWLINRSISKQNCFYNGYESDYHIYQKDTLPLHGVCKVYFTSNNYKRLLSL EKKLHARWNHRINISFSLPTCLEVMPEGVSKGHALERVVKLLGCQLKDCISFGDGMNDQEMLKMAGKGCIMSNAQQRLKD TLPFLEIIGSNKDDAVPHYLQCMYHNTWSDLSLRNGVLN >Mature_279_residues MFRIVASDLDGTLLTPDHRLTSFTKKILKLLTTRNIHFVFATGRHHTNVMQIRDNLKINSYMITSNGARIHNTYGKLIAS YDLATEIVDDLLRVVHYDSQIITNIFYNDKWLINRSISKQNCFYNGYESDYHIYQKDTLPLHGVCKVYFTSNNYKRLLSL EKKLHARWNHRINISFSLPTCLEVMPEGVSKGHALERVVKLLGCQLKDCISFGDGMNDQEMLKMAGKGCIMSNAQQRLKD TLPFLEIIGSNKDDAVPHYLQCMYHNTWSDLSLRNGVLN
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI48994981, Length=264, Percent_Identity=57.9545454545455, Blast_Score=322, Evalue=2e-89, Organism=Escherichia coli, GI87081741, Length=262, Percent_Identity=38.5496183206107, Blast_Score=183, Evalue=1e-47, Organism=Escherichia coli, GI1786982, Length=269, Percent_Identity=23.0483271375465, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI2367265, Length=281, Percent_Identity=25.2669039145907, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR013200 - InterPro: IPR006379 - InterPro: IPR000150 [H]
Pfam domain/function: PF08282 Hydrolase_3 [H]
EC number: NA
Molecular weight: Translated: 32153; Mature: 32153
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS01228 COF_1 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRIVASDLDGTLLTPDHRLTSFTKKILKLLTTRNIHFVFATGRHHTNVMQIRDNLKINS CEEEEEECCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCEEEE YMITSNGARIHNTYGKLIASYDLATEIVDDLLRVVHYDSQIITNIFYNDKWLINRSISKQ EEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCC NCFYNGYESDYHIYQKDTLPLHGVCKVYFTSNNYKRLLSLEKKLHARWNHRINISFSLPT CCEECCCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCH CLEVMPEGVSKGHALERVVKLLGCQLKDCISFGDGMNDQEMLKMAGKGCIMSNAQQRLKD HHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHH TLPFLEIIGSNKDDAVPHYLQCMYHNTWSDLSLRNGVLN HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHCCCCCC >Mature Secondary Structure MFRIVASDLDGTLLTPDHRLTSFTKKILKLLTTRNIHFVFATGRHHTNVMQIRDNLKINS CEEEEEECCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCEEEE YMITSNGARIHNTYGKLIASYDLATEIVDDLLRVVHYDSQIITNIFYNDKWLINRSISKQ EEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCC NCFYNGYESDYHIYQKDTLPLHGVCKVYFTSNNYKRLLSLEKKLHARWNHRINISFSLPT CCEECCCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCH CLEVMPEGVSKGHALERVVKLLGCQLKDCISFGDGMNDQEMLKMAGKGCIMSNAQQRLKD HHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHH TLPFLEIIGSNKDDAVPHYLQCMYHNTWSDLSLRNGVLN HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]