Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is gutQ [H]
Identifier: 71892233
GI number: 71892233
Start: 565638
End: 566615
Strand: Reverse
Name: gutQ [H]
Synonym: BPEN_474
Alternate gene names: 71892233
Gene position: 566615-565638 (Counterclockwise)
Preceding gene: 71892234
Following gene: 71892231
Centisome position: 71.57
GC content: 37.73
Gene sequence:
>978_bases ATGGTAATAATTAATGATGCATTGTTATTGGAATATGCTAAAGAAACTTTAGAGATCGAAATTAACGAAGCTCAAAGAAT GTTAGACAGGTTGGATGAAAGCATTGTGTTTGCTTGTCGTATGTTGTTAGATTGCACGGGAAAGGTTGCTGTTTCTGGAA TAGGTAAATCCGGTCATATTGGAAAAAAAATTGCTGCTTCTTTAGCTAGTACGGGTACTCCGGCTTTTTTTGTTCATCCT GCAGAAGCTTTGCACGGTGATTTAGGTATGATTGGAACACAAGATGTAGTAATGTTTATTTCTTATTCAGGTCGTGCTTG TGAAATAATCACTTTGATGCCGTTGTTAGCAGATAGCGGTATTCCGGTGATTGCATTTACTGGAGATATTAGTTCTCCTT TAGCTAAAGGAGCTACATGTGTTCTTAATATAAAAATACAAAGAGAAGCTTGCCCTATGGAGCTTTCTCCTACTTCAAGC ACAGTTAATACTTTAATGATGGGTGATGCGTTAACAATGGCGCTTATGAGACATAGGGGTTTTAGTTTAGAACAATTTGC TCGATCTCATCCAGGAGGTAGATTAGGAGCACAATTGTTAAATTGCGTACATCATTTGATGCGTACTGGAGAGAATATTT CGAAAGTTTTTTGGAAAGTTACAGTAATGGATGCTATGTTTGAATTAAGTCGTACTGGTCTTGGATTAACTGCTGTATGT GATAATCACAATCGTGTTGCAGGAGTATTTACTGATGGAGATTTAAGGCGTTGGATAGTGCAAGGTAAATCACTCAATGA TCCTGTTGATATTGCTATGACTAAGCCTGGATATTGTATGCTGAAAGAATGGCGCGCAAGTGTAGCATTAAAAGCTTTGC ATCAGAGGAAAATTACCGCAGCGCCAGTAGTGGACAAATTAGGAATATTAGTTGGATCAATTAACATGCATGATTTGCAT CAAGCTGGGATAGAGTAA
Upstream 100 bases:
>100_bases CATATTCCAATGTTATAAGAAGGTATAAGAAGGATGTAAATTATATTAAATATGAGTTGTTTATGATGTTATAGATTTTA CATTTATCATTTTGATAATT
Downstream 100 bases:
>100_bases TTATTTAATTTTATTTAAACTACAGATAAATTTAAATAATATTAAATTAAGCAAAAACATTCCCTTAATTTTGTCATTTG GCTCCTCTGACTGGGCTCGA
Product: D-arabinose 5-phosphate isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MVIINDALLLEYAKETLEIEINEAQRMLDRLDESIVFACRMLLDCTGKVAVSGIGKSGHIGKKIAASLASTGTPAFFVHP AEALHGDLGMIGTQDVVMFISYSGRACEIITLMPLLADSGIPVIAFTGDISSPLAKGATCVLNIKIQREACPMELSPTSS TVNTLMMGDALTMALMRHRGFSLEQFARSHPGGRLGAQLLNCVHHLMRTGENISKVFWKVTVMDAMFELSRTGLGLTAVC DNHNRVAGVFTDGDLRRWIVQGKSLNDPVDIAMTKPGYCMLKEWRASVALKALHQRKITAAPVVDKLGILVGSINMHDLH QAGIE
Sequences:
>Translated_325_residues MVIINDALLLEYAKETLEIEINEAQRMLDRLDESIVFACRMLLDCTGKVAVSGIGKSGHIGKKIAASLASTGTPAFFVHP AEALHGDLGMIGTQDVVMFISYSGRACEIITLMPLLADSGIPVIAFTGDISSPLAKGATCVLNIKIQREACPMELSPTSS TVNTLMMGDALTMALMRHRGFSLEQFARSHPGGRLGAQLLNCVHHLMRTGENISKVFWKVTVMDAMFELSRTGLGLTAVC DNHNRVAGVFTDGDLRRWIVQGKSLNDPVDIAMTKPGYCMLKEWRASVALKALHQRKITAAPVVDKLGILVGSINMHDLH QAGIE >Mature_325_residues MVIINDALLLEYAKETLEIEINEAQRMLDRLDESIVFACRMLLDCTGKVAVSGIGKSGHIGKKIAASLASTGTPAFFVHP AEALHGDLGMIGTQDVVMFISYSGRACEIITLMPLLADSGIPVIAFTGDISSPLAKGATCVLNIKIQREACPMELSPTSS TVNTLMMGDALTMALMRHRGFSLEQFARSHPGGRLGAQLLNCVHHLMRTGENISKVFWKVTVMDAMFELSRTGLGLTAVC DNHNRVAGVFTDGDLRRWIVQGKSLNDPVDIAMTKPGYCMLKEWRASVALKALHQRKITAAPVVDKLGILVGSINMHDLH QAGIE
Specific function: Not Known. [C]
COG id: COG0794
COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI87082151, Length=316, Percent_Identity=61.3924050632911, Blast_Score=387, Evalue=1e-109, Organism=Escherichia coli, GI1789588, Length=315, Percent_Identity=44.7619047619048, Blast_Score=262, Evalue=2e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR004800 - InterPro: IPR001347 [H]
Pfam domain/function: PF00571 CBS; PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 35185; Mature: 35185
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIINDALLLEYAKETLEIEINEAQRMLDRLDESIVFACRMLLDCTGKVAVSGIGKSGHI CEEECHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC GKKIAASLASTGTPAFFVHPAEALHGDLGMIGTQDVVMFISYSGRACEIITLMPLLADSG HHHHHHHHHCCCCCEEEECCHHHHCCCCCCCCCCCEEEEEECCCCEEEHEEHHHHHHCCC IPVIAFTGDISSPLAKGATCVLNIKIQREACPMELSPTSSTVNTLMMGDALTMALMRHRG CEEEEEECCCCCHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC FSLEQFARSHPGGRLGAQLLNCVHHLMRTGENISKVFWKVTVMDAMFELSRTGLGLTAVC CCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE DNHNRVAGVFTDGDLRRWIVQGKSLNDPVDIAMTKPGYCMLKEWRASVALKALHQRKITA CCCCEEEEEEECCHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCH APVVDKLGILVGSINMHDLHQAGIE HHHHHHHHHHEECCCHHHHHHCCCC >Mature Secondary Structure MVIINDALLLEYAKETLEIEINEAQRMLDRLDESIVFACRMLLDCTGKVAVSGIGKSGHI CEEECHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC GKKIAASLASTGTPAFFVHPAEALHGDLGMIGTQDVVMFISYSGRACEIITLMPLLADSG HHHHHHHHHCCCCCEEEECCHHHHCCCCCCCCCCCEEEEEECCCCEEEHEEHHHHHHCCC IPVIAFTGDISSPLAKGATCVLNIKIQREACPMELSPTSSTVNTLMMGDALTMALMRHRG CEEEEEECCCCCHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC FSLEQFARSHPGGRLGAQLLNCVHHLMRTGENISKVFWKVTVMDAMFELSRTGLGLTAVC CCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE DNHNRVAGVFTDGDLRRWIVQGKSLNDPVDIAMTKPGYCMLKEWRASVALKALHQRKITA CCCCEEEEEEECCHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCH APVVDKLGILVGSINMHDLHQAGIE HHHHHHHHHHEECCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 2134185 [H]