Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is yqeI [C]
Identifier: 71892168
GI number: 71892168
Start: 475612
End: 476250
Strand: Direct
Name: yqeI [C]
Synonym: BPEN_401
Alternate gene names: 71892168
Gene position: 475612-476250 (Clockwise)
Preceding gene: 71892166
Following gene: 71892171
Centisome position: 60.08
GC content: 31.61
Gene sequence:
>639_bases ATGAAATATGTCATTCAATCGACTATAATATTTGACACTACAGAATATACTCTGACATTATTAACTGATTCCAACACATC AGTAAAATTATCTAATTCTGCCGGACGAGTATTAGAAGAGCTTATTAAACGACACAATATTGATATTTGTGCACCAGTCA CTCGAGAGCACTTGTTTTCAATCGTTTGGAGAGCTTATGGACTGGAACCATCTAACGGCAACTTAAATCAACAAATTAGT TTAATACGAAAAACTTTAACGTCTTTTGGATTAGATTCCTCGTCCATTATAACTATTCCTAAACGAGGGCTAAAGCTAAA CAATCAATTGATTGTAGAAAAAATACACGAAGATCAACCATGCGTATCTTCCCTTCTACATAAAACCACAGATCAAAACA ATAATTTACTATCATCTTCTATCTTACTAAATATCAAAGCTCATATAAAATATATGATTACTCTGACGATAATGGCCGTA ATATTACTCAGCATTGGTTTTGTGTTTTTATACACTAAAAAAGATCATATTAAACTATATTGTTGCAAAGAAATAAACTC ATGTAATATTTGCGCTTTCCATTCAGAATTAGGATTTGAATGTAATGACTGCATTATGCAGTGCACCGAAATTACATAG
Upstream 100 bases:
>100_bases CTATATATATTTTAATTAAAAAAATATATTATCTGAACCTTATGTAAAAAGCTAACGTAAATGTTAATTTACCCATGTAC AGTTCATATAGAGTAATTAA
Downstream 100 bases:
>100_bases CACCATCAAATAAATAATAATGTAATTCATATTATCTTGCCTTTTAACTCTAAAATTTTAATTGTTATACAACATGCACG TAATAACAGTGTGTGCTTTC
Product: transcriptional regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MKYVIQSTIIFDTTEYTLTLLTDSNTSVKLSNSAGRVLEELIKRHNIDICAPVTREHLFSIVWRAYGLEPSNGNLNQQIS LIRKTLTSFGLDSSSIITIPKRGLKLNNQLIVEKIHEDQPCVSSLLHKTTDQNNNLLSSSILLNIKAHIKYMITLTIMAV ILLSIGFVFLYTKKDHIKLYCCKEINSCNICAFHSELGFECNDCIMQCTEIT
Sequences:
>Translated_212_residues MKYVIQSTIIFDTTEYTLTLLTDSNTSVKLSNSAGRVLEELIKRHNIDICAPVTREHLFSIVWRAYGLEPSNGNLNQQIS LIRKTLTSFGLDSSSIITIPKRGLKLNNQLIVEKIHEDQPCVSSLLHKTTDQNNNLLSSSILLNIKAHIKYMITLTIMAV ILLSIGFVFLYTKKDHIKLYCCKEINSCNICAFHSELGFECNDCIMQCTEIT >Mature_212_residues MKYVIQSTIIFDTTEYTLTLLTDSNTSVKLSNSAGRVLEELIKRHNIDICAPVTREHLFSIVWRAYGLEPSNGNLNQQIS LIRKTLTSFGLDSSSIITIPKRGLKLNNQLIVEKIHEDQPCVSSLLHKTTDQNNNLLSSSILLNIKAHIKYMITLTIMAV ILLSIGFVFLYTKKDHIKLYCCKEINSCNICAFHSELGFECNDCIMQCTEIT
Specific function: Unknown
COG id: COG3710
COG function: function code K; DNA-binding winged-HTH domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23973; Mature: 23973
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYVIQSTIIFDTTEYTLTLLTDSNTSVKLSNSAGRVLEELIKRHNIDICAPVTREHLFS CCEEEEEEEEEECCCEEEEEEECCCCEEEECCCHHHHHHHHHHHCCCCEECCHHHHHHHH IVWRAYGLEPSNGNLNQQISLIRKTLTSFGLDSSSIITIPKRGLKLNNQLIVEKIHEDQP HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHCCCCH CVSSLLHKTTDQNNNLLSSSILLNIKAHIKYMITLTIMAVILLSIGFVFLYTKKDHIKLY HHHHHHHHHCCCCCCEEEHHEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEE CCKEINSCNICAFHSELGFECNDCIMQCTEIT EECCCCCCCEEEECHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MKYVIQSTIIFDTTEYTLTLLTDSNTSVKLSNSAGRVLEELIKRHNIDICAPVTREHLFS CCEEEEEEEEEECCCEEEEEEECCCCEEEECCCHHHHHHHHHHHCCCCEECCHHHHHHHH IVWRAYGLEPSNGNLNQQISLIRKTLTSFGLDSSSIITIPKRGLKLNNQLIVEKIHEDQP HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHCCCCH CVSSLLHKTTDQNNNLLSSSILLNIKAHIKYMITLTIMAVILLSIGFVFLYTKKDHIKLY HHHHHHHHHCCCCCCEEEHHEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEE CCKEINSCNICAFHSELGFECNDCIMQCTEIT EECCCCCCCEEEECHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA