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The map label for this gene is ybhL [H]

Identifier: 71892121

GI number: 71892121

Start: 417934

End: 418644

Strand: Direct

Name: ybhL [H]

Synonym: BPEN_353

Alternate gene names: 71892121

Gene position: 417934-418644 (Clockwise)

Preceding gene: 71892120

Following gene: 71892127

Centisome position: 52.79

GC content: 33.47

Gene sequence:

>711_bases
ATGGATCAATTTCCCCGTTTTCAAAATACAGCGTCAGAACAGGTCAATAACGCAATACAGCCATATATCTTGCAAGTATT
TGGGTGGATGTCTTGCGGGTTATTGTTGACAGCCTTTGTTGCTTGGTACGCTTCTCGAACTCCGGCAATACTTCAATTAT
TATTTTCCAATCAAATAATATTTTTTAGCCTGATTATTGGTCAACTAGCATTAGTATTTGTTCTTTCTGGTATGGTAACA
CGATTAAGTGGTTCTTTAGCAACTACCTTATTTATGTTATATTCAATGTTAACAGGTTTAACCTTATCCAGTGTATTTAT
ACTGTATACTACGTCATCCATATCTAGCGCGTTTGTCGTGACGTCAGGTATGTTCGGAGCAATGACATTATATGGGTATA
CTACTAAACGAGATTTAAGCAGTTTTGGTAATTTATTATTTATGGCGCTAATTGGTATAGTACTAGCCTCAATGGTTAAT
TTATGGTTAAAAAATACAGCTTTAATGTGGCTCATTACATATATTGGCGTTATTATATTCGTCGGGTTAACTGCGTATGA
TACTCAAAAACTCAAATCTATAGGAGCATCTTTATCTATAGACAATCAAGATCAATTTCGTAAATACTCGATTATAGGAG
CATTAACTTTATATTTAGATTTCATTAACTTATTTTTAATGATAGTTCGTATCTTTGGAAATCGCCGTTAA

Upstream 100 bases:

>100_bases
TTTTAAAATGATGTTATGAAACATTTTGTTGATCACATGATTTGCTTGCGATATAATGCACATAAATTTTTTATTTCAAT
CATTTTTGAAGGTGATAAGT

Downstream 100 bases:

>100_bases
TAATAATAGCCGCATATAACAACAATAGCCCGGTCTATTGTTTCTATAGAAACAATAGACCGGGCTATTGTTGTTAACTA
CCCCAAAAATTTTTAAGATA

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MDQFPRFQNTASEQVNNAIQPYILQVFGWMSCGLLLTAFVAWYASRTPAILQLLFSNQIIFFSLIIGQLALVFVLSGMVT
RLSGSLATTLFMLYSMLTGLTLSSVFILYTTSSISSAFVVTSGMFGAMTLYGYTTKRDLSSFGNLLFMALIGIVLASMVN
LWLKNTALMWLITYIGVIIFVGLTAYDTQKLKSIGASLSIDNQDQFRKYSIIGALTLYLDFINLFLMIVRIFGNRR

Sequences:

>Translated_236_residues
MDQFPRFQNTASEQVNNAIQPYILQVFGWMSCGLLLTAFVAWYASRTPAILQLLFSNQIIFFSLIIGQLALVFVLSGMVT
RLSGSLATTLFMLYSMLTGLTLSSVFILYTTSSISSAFVVTSGMFGAMTLYGYTTKRDLSSFGNLLFMALIGIVLASMVN
LWLKNTALMWLITYIGVIIFVGLTAYDTQKLKSIGASLSIDNQDQFRKYSIIGALTLYLDFINLFLMIVRIFGNRR
>Mature_236_residues
MDQFPRFQNTASEQVNNAIQPYILQVFGWMSCGLLLTAFVAWYASRTPAILQLLFSNQIIFFSLIIGQLALVFVLSGMVT
RLSGSLATTLFMLYSMLTGLTLSSVFILYTTSSISSAFVVTSGMFGAMTLYGYTTKRDLSSFGNLLFMALIGIVLASMVN
LWLKNTALMWLITYIGVIIFVGLTAYDTQKLKSIGASLSIDNQDQFRKYSIIGALTLYLDFINLFLMIVRIFGNRR

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=236, Percent_Identity=66.9491525423729, Blast_Score=322, Evalue=1e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 26328; Mature: 26328

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQFPRFQNTASEQVNNAIQPYILQVFGWMSCGLLLTAFVAWYASRTPAILQLLFSNQII
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHH
FFSLIIGQLALVFVLSGMVTRLSGSLATTLFMLYSMLTGLTLSSVFILYTTSSISSAFVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHH
TSGMFGAMTLYGYTTKRDLSSFGNLLFMALIGIVLASMVNLWLKNTALMWLITYIGVIIF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLTAYDTQKLKSIGASLSIDNQDQFRKYSIIGALTLYLDFINLFLMIVRIFGNRR
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDQFPRFQNTASEQVNNAIQPYILQVFGWMSCGLLLTAFVAWYASRTPAILQLLFSNQII
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHH
FFSLIIGQLALVFVLSGMVTRLSGSLATTLFMLYSMLTGLTLSSVFILYTTSSISSAFVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHH
TSGMFGAMTLYGYTTKRDLSSFGNLLFMALIGIVLASMVNLWLKNTALMWLITYIGVIIF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLTAYDTQKLKSIGASLSIDNQDQFRKYSIIGALTLYLDFINLFLMIVRIFGNRR
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]