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The map label for this gene is sucC [H]

Identifier: 71892111

GI number: 71892111

Start: 407081

End: 408256

Strand: Direct

Name: sucC [H]

Synonym: BPEN_343

Alternate gene names: 71892111

Gene position: 407081-408256 (Clockwise)

Preceding gene: 71892110

Following gene: 71892112

Centisome position: 51.42

GC content: 31.55

Gene sequence:

>1176_bases
ATGAACTTATATGAATATCAAGCAAAAAAATTAATGGAAAAATACAATTTACCTGTTTTGAAAGGTTTTGTATGTGCTAC
TATAAATGATATAGAGCATTGTATTGTATCAAATAGCATAGGTTATGGCCCATGGGTAGTAAAATGTCAAGTGCGAGCAG
GAGGGCGCGGGAAATCAGGAGGAGTATGTCTTGTACATTCCACGAAAAATATATTATCTTTTGCTAATAAATGGCTTGGT
AATAGATTGATAACATATCAAACTACCGATACCGGGGAATTAGTGACTTCTATTTTAATAGAACCAGCTGTAAAAATTAT
TCAAGAATTTTATTTAAGCATATCAATTGATAGAGATGAATCCCAAATAATATGTATGGCTTCTACGCAAGGTGGTATGA
ACATTGAAATTACAGAACAAAAAACACCTAATTTTATTCACAAAATTGTCATAAATCCTTCAGTAGGAATATATCCGTAT
CAAGGACGGATATTAGCATGTAAATTAGGCTTATCTGGAGCCAAAATAAATCAATTTTCCAGAATTATTGTTAGCATAAC
ACGTATGTTGCTGGAACATGACCTAACGTTAATTGAAATTAATCCATTAGCTATTACTGATGATGATTATTTTTATTGTT
TAGATGCCAAAATGATTGTAGATCGTAATGCTATATTTAGACAATCAGAATTGTTAAATATATGCGCTATAAATAAACCA
ATCGATATGCTGAATTTTATCAATTACATTCCCTTGGAGGGAAATATTGGCTGTATGGTCAATGGTGCTGGGTTAGCAAT
GGCTACTATGGATGTAATTAAATCATTAGGAGGGATTCCTGCTAATTTTTTAGACATCGGGGGAGGTGCTAATAAAGAAT
GCATAATATCAGCTTTTAATATGATTTTAAAAAATGCTAAAGTGCAAGCGATACTTGTAAATATTTTTGGGGGAATTGTA
TGCTGTGATTTAGTCGCTGAGTGTATCATAACTGCATTGGCCAGATATACCACAAAACATATTCCTATTGTGGCTCGGTT
AGAAGGAAATAATTCTACATTAGGTTCTAATCGATTAATTAATAGCAAACTTAATATTATTGTTACCGATAATTTAATTT
ATGCAATTCAACAAAGTGTAACTGCGGTGAACTTAAAAAATGTCAATTTTAGTTAA

Upstream 100 bases:

>100_bases
AATATTTTTTATATTCTTATATTTTTAATAAATTAATACATTATATTAACTAAATTATTATCTTAATCTTAAGCAATCAC
AATACGTACGATCACATATT

Downstream 100 bases:

>100_bases
CAAAGATACAAAAATAATTTGTCAAGGATTTACTGGTAAACACGCCAGTTTTCATTCTCAACAAGCATTAAATTATGGTA
CTAAAATAGTAGGCGGAGTT

Product: succinyl-CoA synthetase, beta chain

Products: NA

Alternate protein names: Succinyl-CoA synthetase subunit beta; SCS-beta [H]

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MNLYEYQAKKLMEKYNLPVLKGFVCATINDIEHCIVSNSIGYGPWVVKCQVRAGGRGKSGGVCLVHSTKNILSFANKWLG
NRLITYQTTDTGELVTSILIEPAVKIIQEFYLSISIDRDESQIICMASTQGGMNIEITEQKTPNFIHKIVINPSVGIYPY
QGRILACKLGLSGAKINQFSRIIVSITRMLLEHDLTLIEINPLAITDDDYFYCLDAKMIVDRNAIFRQSELLNICAINKP
IDMLNFINYIPLEGNIGCMVNGAGLAMATMDVIKSLGGIPANFLDIGGGANKECIISAFNMILKNAKVQAILVNIFGGIV
CCDLVAECIITALARYTTKHIPIVARLEGNNSTLGSNRLINSKLNIIVTDNLIYAIQQSVTAVNLKNVNFS

Sequences:

>Translated_391_residues
MNLYEYQAKKLMEKYNLPVLKGFVCATINDIEHCIVSNSIGYGPWVVKCQVRAGGRGKSGGVCLVHSTKNILSFANKWLG
NRLITYQTTDTGELVTSILIEPAVKIIQEFYLSISIDRDESQIICMASTQGGMNIEITEQKTPNFIHKIVINPSVGIYPY
QGRILACKLGLSGAKINQFSRIIVSITRMLLEHDLTLIEINPLAITDDDYFYCLDAKMIVDRNAIFRQSELLNICAINKP
IDMLNFINYIPLEGNIGCMVNGAGLAMATMDVIKSLGGIPANFLDIGGGANKECIISAFNMILKNAKVQAILVNIFGGIV
CCDLVAECIITALARYTTKHIPIVARLEGNNSTLGSNRLINSKLNIIVTDNLIYAIQQSVTAVNLKNVNFS
>Mature_391_residues
MNLYEYQAKKLMEKYNLPVLKGFVCATINDIEHCIVSNSIGYGPWVVKCQVRAGGRGKSGGVCLVHSTKNILSFANKWLG
NRLITYQTTDTGELVTSILIEPAVKIIQEFYLSISIDRDESQIICMASTQGGMNIEITEQKTPNFIHKIVINPSVGIYPY
QGRILACKLGLSGAKINQFSRIIVSITRMLLEHDLTLIEINPLAITDDDYFYCLDAKMIVDRNAIFRQSELLNICAINKP
IDMLNFINYIPLEGNIGCMVNGAGLAMATMDVIKSLGGIPANFLDIGGGANKECIISAFNMILKNAKVQAILVNIFGGIV
CCDLVAECIITALARYTTKHIPIVARLEGNNSTLGSNRLINSKLNIIVTDNLIYAIQQSVTAVNLKNVNFS

Specific function: Tricarboxylic acid cycle. [C]

COG id: COG0045

COG function: function code C; Succinyl-CoA synthetase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

Organism=Homo sapiens, GI11321583, Length=393, Percent_Identity=36.1323155216285, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI157779135, Length=378, Percent_Identity=38.3597883597884, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI294862256, Length=361, Percent_Identity=38.5041551246537, Blast_Score=218, Evalue=7e-57,
Organism=Escherichia coli, GI1786948, Length=391, Percent_Identity=50.8951406649616, Blast_Score=394, Evalue=1e-111,
Organism=Caenorhabditis elegans, GI17567829, Length=398, Percent_Identity=40.4522613065327, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17539378, Length=397, Percent_Identity=36.7758186397985, Blast_Score=245, Evalue=3e-65,
Organism=Saccharomyces cerevisiae, GI6321683, Length=395, Percent_Identity=37.9746835443038, Blast_Score=247, Evalue=3e-66,
Organism=Drosophila melanogaster, GI21356231, Length=397, Percent_Identity=36.5239294710327, Blast_Score=238, Evalue=5e-63,
Organism=Drosophila melanogaster, GI161078106, Length=392, Percent_Identity=34.9489795918367, Blast_Score=221, Evalue=6e-58,
Organism=Drosophila melanogaster, GI24645208, Length=392, Percent_Identity=34.9489795918367, Blast_Score=221, Evalue=6e-58,
Organism=Drosophila melanogaster, GI281361397, Length=396, Percent_Identity=34.8484848484849, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI281361395, Length=396, Percent_Identity=34.8484848484849, Blast_Score=218, Evalue=7e-57,

Paralogues:

None

Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2361 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 3,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013650
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR005811
- InterPro:   IPR017866
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF00549 Ligase_CoA [H]

EC number: =6.2.1.5 [H]

Molecular weight: Translated: 42950; Mature: 42950

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS01217 SUCCINYL_COA_LIG_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLYEYQAKKLMEKYNLPVLKGFVCATINDIEHCIVSNSIGYGPWVVKCQVRAGGRGKSG
CCCHHHHHHHHHHHHCCCHHHHHHEEHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCC
GVCLVHSTKNILSFANKWLGNRLITYQTTDTGELVTSILIEPAVKIIQEFYLSISIDRDE
CEEEEECCHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
SQIICMASTQGGMNIEITEQKTPNFIHKIVINPSVGIYPYQGRILACKLGLSGAKINQFS
CEEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCEEEEEEECCCCCHHHHHH
RIIVSITRMLLEHDLTLIEINPLAITDDDYFYCLDAKMIVDRNAIFRQSELLNICAINKP
HHHHHHHHHHHHCCCEEEEEECEEEECCCEEEEEECEEEECCCHHHHHHHHHEEEECCCC
IDMLNFINYIPLEGNIGCMVNGAGLAMATMDVIKSLGGIPANFLDIGGGANKECIISAFN
HHHHHHHHEECCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHH
MILKNAKVQAILVNIFGGIVCCDLVAECIITALARYTTKHIPIVARLEGNNSTLGSNRLI
HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEE
NSKLNIIVTDNLIYAIQQSVTAVNLKNVNFS
CCCEEEEEECCHHHHHHHCCEEEEEECCCCC
>Mature Secondary Structure
MNLYEYQAKKLMEKYNLPVLKGFVCATINDIEHCIVSNSIGYGPWVVKCQVRAGGRGKSG
CCCHHHHHHHHHHHHCCCHHHHHHEEHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCC
GVCLVHSTKNILSFANKWLGNRLITYQTTDTGELVTSILIEPAVKIIQEFYLSISIDRDE
CEEEEECCHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
SQIICMASTQGGMNIEITEQKTPNFIHKIVINPSVGIYPYQGRILACKLGLSGAKINQFS
CEEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCEEEEEEECCCCCHHHHHH
RIIVSITRMLLEHDLTLIEINPLAITDDDYFYCLDAKMIVDRNAIFRQSELLNICAINKP
HHHHHHHHHHHHCCCEEEEEECEEEECCCEEEEEECEEEECCCHHHHHHHHHEEEECCCC
IDMLNFINYIPLEGNIGCMVNGAGLAMATMDVIKSLGGIPANFLDIGGGANKECIISAFN
HHHHHHHHEECCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHH
MILKNAKVQAILVNIFGGIVCCDLVAECIITALARYTTKHIPIVARLEGNNSTLGSNRLI
HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEE
NSKLNIIVTDNLIYAIQQSVTAVNLKNVNFS
CCCEEEEEECCHHHHHHHCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA