Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is yggX [C]
Identifier: 71892029
GI number: 71892029
Start: 289623
End: 289877
Strand: Reverse
Name: yggX [C]
Synonym: BPEN_255
Alternate gene names: 71892029
Gene position: 289877-289623 (Counterclockwise)
Preceding gene: 71892030
Following gene: 71892026
Centisome position: 36.62
GC content: 25.49
Gene sequence:
>255_bases ATGTCCAAAATAATTTATTGTGTTTTTTTAAAAAAATATGCTGAAGGACTAGACGCTCCATGTTATCCAGGAGCATTAGG CAAATATATTTATGAACATATTTCTAATATCGCATGGATGCAGTGGCAAGATAAACAAACTATTTTAATCAATGAAAATA AACTCAATATGATGAATATTGCAGATCGTACAATACTTGAAAAAGAAATGAAAATTTTTCTATTCGGAAAAAATTTTTCA ATAAAAAATAATTAA
Upstream 100 bases:
>100_bases CAATTTCTATAATACTGCAGAAATTGTAATCATAACGCAGTAAAGATATTGAATTTCCAATTCTCATACAAATGATTGTT GCAATGTGAGACTTCTAATA
Downstream 100 bases:
>100_bases TTACTAGAGTTTTTCTCTTTCAATTGTAATGTAATTACACGTAAATTTTTTCGAACTTCGTGTTTAAAGTAGAGCGATGA TTTGTTATGACAATAACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSKIIYCVFLKKYAEGLDAPCYPGALGKYIYEHISNIAWMQWQDKQTILINENKLNMMNIADRTILEKEMKIFLFGKNFS IKNN
Sequences:
>Translated_84_residues MSKIIYCVFLKKYAEGLDAPCYPGALGKYIYEHISNIAWMQWQDKQTILINENKLNMMNIADRTILEKEMKIFLFGKNFS IKNN >Mature_83_residues SKIIYCVFLKKYAEGLDAPCYPGALGKYIYEHISNIAWMQWQDKQTILINENKLNMMNIADRTILEKEMKIFLFGKNFSI KNN
Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes
COG id: COG2924
COG function: function code CO; Fe-S cluster protector protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fe(2+)-trafficking protein family
Homologues:
Organism=Escherichia coli, GI1789332, Length=83, Percent_Identity=59.0361445783133, Blast_Score=98, Evalue=8e-23,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): FETP_BLOPB (Q493F6)
Other databases:
- EMBL: CP000016 - RefSeq: YP_277759.1 - ProteinModelPortal: Q493F6 - SMR: Q493F6 - STRING: Q493F6 - GeneID: 3562804 - GenomeReviews: CP000016_GR - KEGG: bpn:BPEN_255 - eggNOG: COG2924 - HOGENOM: HBG289800 - OMA: SKQTMLI - ProtClustDB: PRK05408 - BioCyc: CBLO291272:BPEN_255-MONOMER - HAMAP: MF_00686 - InterPro: IPR007457 - PIRSF: PIRSF029827 - ProDom: PD029191
Pfam domain/function: PF04362 Iron_traffic; SSF111148 Fe_traffick_prot_YggX
EC number: NA
Molecular weight: Translated: 9898; Mature: 9767
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIIYCVFLKKYAEGLDAPCYPGALGKYIYEHISNIAWMQWQDKQTILINENKLNMMNI CCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCEEHH ADRTILEKEMKIFLFGKNFSIKNN HHHHHHHCCEEEEEECCCEECCCC >Mature Secondary Structure SKIIYCVFLKKYAEGLDAPCYPGALGKYIYEHISNIAWMQWQDKQTILINENKLNMMNI CCEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCEEHH ADRTILEKEMKIFLFGKNFSIKNN HHHHHHHCCEEEEEECCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA