Click here to switch to the map view.

The map label for this gene is yajR [H]

Identifier: 71892021

GI number: 71892021

Start: 279173

End: 280333

Strand: Reverse

Name: yajR [H]

Synonym: BPEN_247

Alternate gene names: 71892021

Gene position: 280333-279173 (Counterclockwise)

Preceding gene: 71892022

Following gene: 71892019

Centisome position: 35.41

GC content: 28.25

Gene sequence:

>1161_bases
ATGACTAAAAAAGAATTGTACATTATATTGGGATTGAGCATGATATTTGCATTACGTATGGCGGGAGTATTTATGATTCT
GCCCGTTTTAACTGTTCATGCTGTTTCCTTACAAGGAGCAAATGGAAGTTCGCTAGGTGTAGCTATTGGAATATATGGCT
TAATGCAAATAATCTTCCAATTACCTTTTGGATTAATGTCTGACAAAATTGGACGTAAATCTGTTATTATAGGAGGATTA
GTGTTATTTATTTTGGGTAGTGAAATAGCAGCAACTACTAATAATATTTGGGGGCTTATTATTGGAAGAGCACTACAAGG
ATCAGGAGCTATTGGCAGCTCACTTATAGCATTGTTATTAGACTCAGTACAAGAACAACATCATATAAAAGCAATGGCGT
CAGTTGGCATGAGTGTTGGGATAGCTTTTGCTGCTTCCATGGTTTTTGGGCCAATTATTACTAATAGGTTTGGGTTGAAC
GGATTATTTCATTGTATTACTATATTAATAGTATTAGCTATTATTTTAATTTACATTATAAAACCACCTATTTCTTCTCA
TCCCGTGAAAAATAATGAAAATTTATTTATTATGTTTAATAAAATTAAACATATACTAATTCAGTCACAATTAATGAAAC
TAAATATCAGCATATTTTTTACACATACTATTTTAATGTTAAACTTTATTGTTTTACCCAAAATAATGATAAATTTAGGA
TTTCCTCTTAGTATACATTGGAAAATTTATAGCATTATTATGATAATATCTGCGATCGCAGTATTGACATGTATTTTCTA
TTTTGAAGGTAAAAATTGTACAAAAAAGATATTAATTGCTTGTATGAATATTTTATTTTTATCTGAACTAATTATGTCAA
TGAATACGTTATATAGTAAAATGTTTTTATTTGGAATGCAGTTATTTTTTATAGCATTTAGTTTAATAGAGACAATATTA
CCTGCTTTGATAAACAAAGCAGCACAAAAAAAATATAAAGTAACTACCATCAGTATTTATTCTATTGGTCAATTTTTAGG
AATAGGATTTGGTGGGATTTTAGGTGGATTTTTATTAGAAATGAAAGGAGTATGGTTGGTATTGTTTTTTTCATTAACTA
TATCCTTATTATGTGTTATAGTAATTAACACACTACATTAA

Upstream 100 bases:

>100_bases
TTTATAAAATTTTTATTTTGAATATTTCATATAATATATTGATATTTTTAAAATATATAAATTTAAGATATTTCGATATC
CATCTATTGTTAATACTATA

Downstream 100 bases:

>100_bases
TTATCTATAATACGGTAAAATTTTACAGCTAATAAATAGTACAATGAAATACATAAATCCATTGCTTCATTAACATGCAG
AATATTTCAATAAATACTGA

Product: MFS family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MTKKELYIILGLSMIFALRMAGVFMILPVLTVHAVSLQGANGSSLGVAIGIYGLMQIIFQLPFGLMSDKIGRKSVIIGGL
VLFILGSEIAATTNNIWGLIIGRALQGSGAIGSSLIALLLDSVQEQHHIKAMASVGMSVGIAFAASMVFGPIITNRFGLN
GLFHCITILIVLAIILIYIIKPPISSHPVKNNENLFIMFNKIKHILIQSQLMKLNISIFFTHTILMLNFIVLPKIMINLG
FPLSIHWKIYSIIMIISAIAVLTCIFYFEGKNCTKKILIACMNILFLSELIMSMNTLYSKMFLFGMQLFFIAFSLIETIL
PALINKAAQKKYKVTTISIYSIGQFLGIGFGGILGGFLLEMKGVWLVLFFSLTISLLCVIVINTLH

Sequences:

>Translated_386_residues
MTKKELYIILGLSMIFALRMAGVFMILPVLTVHAVSLQGANGSSLGVAIGIYGLMQIIFQLPFGLMSDKIGRKSVIIGGL
VLFILGSEIAATTNNIWGLIIGRALQGSGAIGSSLIALLLDSVQEQHHIKAMASVGMSVGIAFAASMVFGPIITNRFGLN
GLFHCITILIVLAIILIYIIKPPISSHPVKNNENLFIMFNKIKHILIQSQLMKLNISIFFTHTILMLNFIVLPKIMINLG
FPLSIHWKIYSIIMIISAIAVLTCIFYFEGKNCTKKILIACMNILFLSELIMSMNTLYSKMFLFGMQLFFIAFSLIETIL
PALINKAAQKKYKVTTISIYSIGQFLGIGFGGILGGFLLEMKGVWLVLFFSLTISLLCVIVINTLH
>Mature_385_residues
TKKELYIILGLSMIFALRMAGVFMILPVLTVHAVSLQGANGSSLGVAIGIYGLMQIIFQLPFGLMSDKIGRKSVIIGGLV
LFILGSEIAATTNNIWGLIIGRALQGSGAIGSSLIALLLDSVQEQHHIKAMASVGMSVGIAFAASMVFGPIITNRFGLNG
LFHCITILIVLAIILIYIIKPPISSHPVKNNENLFIMFNKIKHILIQSQLMKLNISIFFTHTILMLNFIVLPKIMINLGF
PLSIHWKIYSIIMIISAIAVLTCIFYFEGKNCTKKILIACMNILFLSELIMSMNTLYSKMFLFGMQLFFIAFSLIETILP
ALINKAAQKKYKVTTISIYSIGQFLGIGFGGILGGFLLEMKGVWLVLFFSLTISLLCVIVINTLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=370, Percent_Identity=44.3243243243243, Blast_Score=312, Evalue=3e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42403; Mature: 42272

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKELYIILGLSMIFALRMAGVFMILPVLTVHAVSLQGANGSSLGVAIGIYGLMQIIFQ
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LPFGLMSDKIGRKSVIIGGLVLFILGSEIAATTNNIWGLIIGRALQGSGAIGSSLIALLL
CCHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH
DSVQEQHHIKAMASVGMSVGIAFAASMVFGPIITNRFGLNGLFHCITILIVLAIILIYII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KPPISSHPVKNNENLFIMFNKIKHILIQSQLMKLNISIFFTHTILMLNFIVLPKIMINLG
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FPLSIHWKIYSIIMIISAIAVLTCIFYFEGKNCTKKILIACMNILFLSELIMSMNTLYSK
CCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFLFGMQLFFIAFSLIETILPALINKAAQKKYKVTTISIYSIGQFLGIGFGGILGGFLLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHCCHHHHHHHHHHH
MKGVWLVLFFSLTISLLCVIVINTLH
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKKELYIILGLSMIFALRMAGVFMILPVLTVHAVSLQGANGSSLGVAIGIYGLMQIIFQ
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LPFGLMSDKIGRKSVIIGGLVLFILGSEIAATTNNIWGLIIGRALQGSGAIGSSLIALLL
CCHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH
DSVQEQHHIKAMASVGMSVGIAFAASMVFGPIITNRFGLNGLFHCITILIVLAIILIYII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KPPISSHPVKNNENLFIMFNKIKHILIQSQLMKLNISIFFTHTILMLNFIVLPKIMINLG
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FPLSIHWKIYSIIMIISAIAVLTCIFYFEGKNCTKKILIACMNILFLSELIMSMNTLYSK
CCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFLFGMQLFFIAFSLIETILPALINKAAQKKYKVTTISIYSIGQFLGIGFGGILGGFLLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHCCHHHHHHHHHHH
MKGVWLVLFFSLTISLLCVIVINTLH
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]