Definition Pseudomonas fluorescens Pf-5 chromosome, complete genome.
Accession NC_004129
Length 7,074,893

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The map label for this gene is mfd

Identifier: 70729336

GI number:

Start: 2182453

End: 2185902

Strand: Reverse

Name: mfd

Synonym: PFL_1954

Alternate gene names: NA

Gene position: NA

Preceding gene: 70729338

Following gene: 70729335

Centisome position: NA

GC content: NA

Gene sequence:

>3450_bases
GTGCCCGTCCTGCGTCTACCGCTACTCCCTGCCGCCGCCGGCAAACAGCATTGGGGCAACTTGCCCGGTGCCGCCCTGAG
CCTGGCCATCGCCGAAGCCGCCAGCGCTGCCAAGCGCTTCACCCTCCTGCTGACTGCCGACAGCCAAAGCGCTGACCGGC
TGGAACAGGAGCTGAGCTTCTTCGCCCCGGATCTGCCGGTGCTGCATTTTCCTGACTGGGAAACCCTGCCCTACGACCTG
TTCTCGCCGCACCAGGACATCATTTCCCAGCGCATCGCCAGCCTCTATCGGCTGCCGGAGCTGGAGCATGGCGTGCTGGT
GGTGCCGATCACCACTGCCCTGCACCGCCTGGCGCCCACCCAGTTCCTGCTGGGCAGCAGCCTGGTGCTGGACGTCGGCC
AGAAGCTCGATGTGGAACAGATGCGCACCCGCCTGGAAGCCAGTGGTTACCGCTACGTGGACACCGTCTACGAACACGGC
GAATTCACCGTGCGCGGCGCACTGATCGATCTGTTTCCCATGGGCAGCAAGCTGCCCTATCGCATCGACCTGTTCGACGA
CGAAATCGAGACCCTGCGCACCTTCGATCCGGAGAACCAGCGCTCCATCGACAAGGTCGACTCGGTGCGCCTGCTGCCGG
CCAAGGAGTTCCCGCTGCAGAAAGAAGCGGTGACCCGCTTCAAGGCGCGCTTTCGCGAACGCTTCGATGTGGACTTCCGC
CGCTGCCCGATCTTCCAGGACCTGAGCAGCGGGATTACCCCGGCCGGTATCGAGTACTACCTGCCGCTGTTCTTCGAAGA
GACCTCGACCCTGTTCGACTACCTGCCCCAGGACACCCAGGTGTTTTCCCTGCCGGGCATCGAACAGGCCGCGGAAAACT
TCTGGAACGATGTACGCAACCGCTATGAAGAGCGCCGCGTCGACCCTTCGCGCCCGCTCCTGCCCCCGGCCGAACTGTTC
CTGCCAGTGGAAGACTGCTTCGCCCGGCTGAAGAACTGGCCGCGAGTGGTGGCCAGCCAGCAGGACATCGAAACCGGTGT
CGGCCGCGAACGCTTCCCGGCCCACGAGCTGCCGAACCTGGCCATCGAAGCCAAGGCCAACCAGCCGCTGGCAGCACTTT
CGGGCTTTCTCGACGAGTTCCCCGGGCGAGTGCTGTTCACCGCCGAATCCGCCGGCCGCCGGGAAGTGCTGCTGGAGCTG
CTGGAGCGCCTCAAGCTGCGGCCCAAGACCGTCGACAGCTGGCCGGACTTCGTCGCCAGCAAGGAACGCCTGGCAATCAC
CATCGCCCCGTTGGACGAAGGCCTGGTGCTGGACGATCCGGCCCTGGCCCTGGTGGCCGAAAGCCCATTGTTCGGCCAGC
GAGTAATGCAGCGTCGGCGCCGGGAAAAGCGCGCCGATGCCAACAACGACGCGGTGATCAAGAACCTCACCGAGCTGCGT
GAAGGTGCGCCGGTGGTGCATATCGACCATGGTGTCGGTCGCTACCTGGGCCTGGCGACCCTGGAAATCGACAACCAGGC
CGCCGAGTTCCTGACCCTGGAATACGCCGAGGGGGCCAAGCTTTATGTGCCCGTGGCCAACCTGCACCTGATCGCCCGCT
ACACCGGCAGCGACGACGCCCTCGCGCCCCTGCATCGCCTGGGCTCGGAAGCCTGGCAGAAGGCCAAGCGCAAGGCCGCC
GAACAGGTGCGCGATGTGGCTGCCGAACTGCTGGACATCTATGCCCGCCGCGCCGCCCGCGAAGGCTATGCCTTTGCTGA
CCCGAAGGCCGACTACGCCACCTTCAGTGCCGGCTTCCCCTTCGAGGAAACCCCGGACCAGCAGAGCACCATCGAAGCGG
TGCGCGAGGACATGCTGTCGGGCAAGCCCATGGACCGCCTGGTATGCGGCGACGTGGGCTTCGGCAAGACCGAAGTGGCC
ATGCGCGCGGCCTTCATCGCGGTCCACGGCGGCAAGCAAGTGGCGATCCTGGTGCCCACCACCCTGCTCGCCCAGCAGCA
CTACAACAGCTTCCGCGACCGCTTCGCCGACTGGCCGGTGACCGTGGAAGTGATGAGCCGCTTCAAGTCCACCAAGGAAG
TGAATGCTGCGGTAGCCGACCTCGCCGAAGGCAAGATCGACATCGTCATCGGCACCCACAAGCTGTTGCAGGACGATGTG
AAGATCAAGAACCTGGGGCTGGTGATCATCGACGAAGAACACCGTTTCGGTGTCCGCCAGAAAGAGCAGCTCAAGGCACT
GCGCAGCGAAGTCGACATCCTGACCCTGACCGCCACGCCGATCCCGCGGACCCTGAACATGGCCGTCTCGGGCATGCGCG
ATCTGTCGATCATCGCTACCCCGCCGGCGCGACGCCTGTCGGTGCGCACCTTTGTCATGGAGCAGAACAAGAGCACGGTC
AAAGAGGCCCTGTTGCGAGAACTGCTGCGTGGCGGCCAGGTGTACTACCTGCACAACGACGTGAAGACCATCGAGAAATG
CGCCGCCGACCTGGCCGAACTGGTACCCGAGGCGCGGATCGGCATCGGCCACGGGCAGATGCGCGAACGCGAACTCGAAC
AAGTGATGAGCGACTTCTATCACAAGCGCTTCAACGTGCTGATCGCCTCGACCATCATCGAGACCGGCATCGACGTGCCC
AGCGCCAACACCATCATCATCGAGCGCGCCGACAAGTTCGGCCTGGCCCAGTTGCACCAGTTGCGCGGTCGGGTCGGGCG
CAGCCACCACCAGGCCTACGCATACCTCTTGACGCCACCGCGCCAGCAGATCACCCCGGACGCGGAAAAACGCCTGGAGG
CCATCGCCAACACCCAGGACCTGGGAGCCGGCTTCGTCCTGGCCACCAACGACCTGGAGATCCGTGGCGCTGGCGAACTG
CTGGGCGACGGCCAGAGCGGGCAGATCCAGGCCGTGGGCTTCACCCTCTACATGGAAATGCTCGAGCGCGCGGTGAAGGC
CATCCGCAAGGGCGAACAACCGAACCTCGACCAGCCACTGGGTGGCGGCCCGGAAATCAACCTGCGCTTGCCGGCACTGA
TTCCCGAGGACTACCTGCCGGACGTGCACGCGCGCCTGATCCTCTACAAGCGCATCGCTTCCGCCACCGACGAGGACGGC
CTGAAGGACCTGCAAGTGGAGATGATCGACCGCTTCGGCCTGCTGCCGGAGCCGACCAAGAACCTGATCCGCCTGACCCT
GCTCAAACTCCAGGCCGAGCAACTGGGGATCAAGAAGGTCGACGGCGGCCCACAAGGCGGCCGCATCGAGTTCGCCGCAG
ATACACCAGTGGACCCACTGGCCTTGATCAAACTGATCCAGGGCCAGCCCAAACGCTACAAATTCGAAGGCGCAACCCTG
TTCAAGTTCATGGTGCCGATGGAGCGCCCGGAAGAGCGCTTTAATACATTGGAGGCACTGTTTGAGCGCCTCACCCCGAA
ATCTGCTTGA

Upstream 100 bases:

>100_bases
TTGCCCCAACCAGCGTATTAGACGCATCAGCCACTGACAGTGGCTGCCCGGGGCCGTTACAATTACCGACTTTGTCGCAA
CGCTTGGAGCTTGACCGTCC

Downstream 100 bases:

>100_bases
AGGACGCCCCATGCGCCTGTTCCGCTCCCTGACCCTGCTCGTGGCCCTGGTCGCGCCAACGGCCTTTGCCGATGACCTGT
ACCAGGTGGAAATGATCCTC

Product: transcription-repair coupling factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1149_residues
MPVLRLPLLPAAAGKQHWGNLPGAALSLAIAEAASAAKRFTLLLTADSQSADRLEQELSFFAPDLPVLHFPDWETLPYDL
FSPHQDIISQRIASLYRLPELEHGVLVVPITTALHRLAPTQFLLGSSLVLDVGQKLDVEQMRTRLEASGYRYVDTVYEHG
EFTVRGALIDLFPMGSKLPYRIDLFDDEIETLRTFDPENQRSIDKVDSVRLLPAKEFPLQKEAVTRFKARFRERFDVDFR
RCPIFQDLSSGITPAGIEYYLPLFFEETSTLFDYLPQDTQVFSLPGIEQAAENFWNDVRNRYEERRVDPSRPLLPPAELF
LPVEDCFARLKNWPRVVASQQDIETGVGRERFPAHELPNLAIEAKANQPLAALSGFLDEFPGRVLFTAESAGRREVLLEL
LERLKLRPKTVDSWPDFVASKERLAITIAPLDEGLVLDDPALALVAESPLFGQRVMQRRRREKRADANNDAVIKNLTELR
EGAPVVHIDHGVGRYLGLATLEIDNQAAEFLTLEYAEGAKLYVPVANLHLIARYTGSDDALAPLHRLGSEAWQKAKRKAA
EQVRDVAAELLDIYARRAAREGYAFADPKADYATFSAGFPFEETPDQQSTIEAVREDMLSGKPMDRLVCGDVGFGKTEVA
MRAAFIAVHGGKQVAILVPTTLLAQQHYNSFRDRFADWPVTVEVMSRFKSTKEVNAAVADLAEGKIDIVIGTHKLLQDDV
KIKNLGLVIIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVSGMRDLSIIATPPARRLSVRTFVMEQNKSTV
KEALLRELLRGGQVYYLHNDVKTIEKCAADLAELVPEARIGIGHGQMRERELEQVMSDFYHKRFNVLIASTIIETGIDVP
SANTIIIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPRQQITPDAEKRLEAIANTQDLGAGFVLATNDLEIRGAGEL
LGDGQSGQIQAVGFTLYMEMLERAVKAIRKGEQPNLDQPLGGGPEINLRLPALIPEDYLPDVHARLILYKRIASATDEDG
LKDLQVEMIDRFGLLPEPTKNLIRLTLLKLQAEQLGIKKVDGGPQGGRIEFAADTPVDPLALIKLIQGQPKRYKFEGATL
FKFMVPMERPEERFNTLEALFERLTPKSA

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA