Definition | Corynebacterium jeikeium K411, complete genome. |
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Accession | NC_007164 |
Length | 2,462,499 |
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The map label for this gene is pgl [H]
Identifier: 68536073
GI number: 68536073
Start: 1178227
End: 1179060
Strand: Direct
Name: pgl [H]
Synonym: jk0996
Alternate gene names: 68536073
Gene position: 1178227-1179060 (Clockwise)
Preceding gene: 68536072
Following gene: 68536119
Centisome position: 47.85
GC content: 66.79
Gene sequence:
>834_bases ATGAAGCCCACGCAGAATAACCGCCGCACCGCTGTTGTCAGCGACAAGACAGGGGTGGAGCTGCGTCCCCGCGACAACAA GCAGGACCTGGCAACCGCCGCAGCCCGCGAGTTCATCAACACCGTGGCGGAACTGCAGCGCACCGGGGACACCGTGACGG GCGACGGCATCGTCCGCGTGGTGCTAACCGGCGGCGGGGCGGGCATCGCCACCCTGGCGGAGATCGCCGCCCTGGATCAC GCGGCGCAGCAGACGGCGGAGGACTTCCCCGTCACCGCGATCGACTGGTCCCAGGTATATGTTTTCTTCGGTGACGAGCG CTTCCTGGCTGCGGGCGACGCGGAGCGTAACGACAAGCAGGCCTTCGATGCCCTGCTGCGCCACGTGAACATCCCCTCAC TGAACGTGTTCCGTGTTCCGGCCCTGGCCGCCGGTGAAGAGGCCGACGGCCCGGCGCTGGATGCCGCCGCCGAGTTCTAC GGCAAGACGGTGGATCAGGTGGCTCCCGAGGGCTTCGACATCCACCTGCTGGGAATGGGGCCGGAGGGGCACATCAACTC GCTGTTCCCGCATACGGACGCGCTACTGCACGCCGAGGGTTCGGTGGTTGCGGTGCGCGAGTGCCCGAAGCCCCCGGCAG AGCGCATCAGCCTGACCATGCAGGCGGTCAACCGCTCCCGGCAGGTGTGGCTGCTAGTCAGCGGTGAGGAAAAGAAAGAA GCTGCGGGCCAGGTGTTTAACGGCGGCAATGGCGCCGAATGGCCCGCAGCTTTGGCCTCCGGTACGAAGGCGACGCTGCT GTGGGTTGACGAGGCCGCCAACCCACTGCTTTAA
Upstream 100 bases:
>100_bases GTGTGCAAACCCCCGAGCCGCGAGAGGACAAGCTGGACCGCTGGACCTCCCGCGATGCCCGCGAAACCTATAACGCCTTC GATGGTCAGGAGTCTCTACG
Downstream 100 bases:
>100_bases GTTGTTTAAACGGTCGTCTGGCCTTCTAGGCCAGGCCGTAGTGCAGAACCAGGTTCAGGCCGACTAGGGCCAGCAGCCAG ATCACTGCGGTGCCCACGGT
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKPTQNNRRTAVVSDKTGVELRPRDNKQDLATAAAREFINTVAELQRTGDTVTGDGIVRVVLTGGGAGIATLAEIAALDH AAQQTAEDFPVTAIDWSQVYVFFGDERFLAAGDAERNDKQAFDALLRHVNIPSLNVFRVPALAAGEEADGPALDAAAEFY GKTVDQVAPEGFDIHLLGMGPEGHINSLFPHTDALLHAEGSVVAVRECPKPPAERISLTMQAVNRSRQVWLLVSGEEKKE AAGQVFNGGNGAEWPAALASGTKATLLWVDEAANPLL
Sequences:
>Translated_277_residues MKPTQNNRRTAVVSDKTGVELRPRDNKQDLATAAAREFINTVAELQRTGDTVTGDGIVRVVLTGGGAGIATLAEIAALDH AAQQTAEDFPVTAIDWSQVYVFFGDERFLAAGDAERNDKQAFDALLRHVNIPSLNVFRVPALAAGEEADGPALDAAAEFY GKTVDQVAPEGFDIHLLGMGPEGHINSLFPHTDALLHAEGSVVAVRECPKPPAERISLTMQAVNRSRQVWLLVSGEEKKE AAGQVFNGGNGAEWPAALASGTKATLLWVDEAANPLL >Mature_277_residues MKPTQNNRRTAVVSDKTGVELRPRDNKQDLATAAAREFINTVAELQRTGDTVTGDGIVRVVLTGGGAGIATLAEIAALDH AAQQTAEDFPVTAIDWSQVYVFFGDERFLAAGDAERNDKQAFDALLRHVNIPSLNVFRVPALAAGEEADGPALDAAAEFY GKTVDQVAPEGFDIHLLGMGPEGHINSLFPHTDALLHAEGSVVAVRECPKPPAERISLTMQAVNRSRQVWLLVSGEEKKE AAGQVFNGGNGAEWPAALASGTKATLLWVDEAANPLL
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=257, Percent_Identity=29.1828793774319, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI6912586, Length=177, Percent_Identity=32.7683615819209, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI115533060, Length=191, Percent_Identity=28.2722513089005, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI115533058, Length=191, Percent_Identity=28.2722513089005, Blast_Score=75, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6321687, Length=251, Percent_Identity=29.4820717131474, Blast_Score=78, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6321957, Length=208, Percent_Identity=27.8846153846154, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI24641119, Length=172, Percent_Identity=31.9767441860465, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 29471; Mature: 29471
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTQNNRRTAVVSDKTGVELRPRDNKQDLATAAAREFINTVAELQRTGDTVTGDGIVRV CCCCCCCCEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEE VLTGGGAGIATLAEIAALDHAAQQTAEDFPVTAIDWSQVYVFFGDERFLAAGDAERNDKQ EEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEECCCEEEECCCCCCCHHH AFDALLRHVNIPSLNVFRVPALAAGEEADGPALDAAAEFYGKTVDQVAPEGFDIHLLGMG HHHHHHHHCCCCCCEEEECCCEECCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEEEEEEC PEGHINSLFPHTDALLHAEGSVVAVRECPKPPAERISLTMQAVNRSRQVWLLVSGEEKKE CCCCCCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHH AAGQVFNGGNGAEWPAALASGTKATLLWVDEAANPLL HHCCEECCCCCCCCCHHHHCCCEEEEEEEECCCCCCC >Mature Secondary Structure MKPTQNNRRTAVVSDKTGVELRPRDNKQDLATAAAREFINTVAELQRTGDTVTGDGIVRV CCCCCCCCEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEE VLTGGGAGIATLAEIAALDHAAQQTAEDFPVTAIDWSQVYVFFGDERFLAAGDAERNDKQ EEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEECCCEEEECCCCCCCHHH AFDALLRHVNIPSLNVFRVPALAAGEEADGPALDAAAEFYGKTVDQVAPEGFDIHLLGMG HHHHHHHHCCCCCCEEEECCCEECCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEEEEEEC PEGHINSLFPHTDALLHAEGSVVAVRECPKPPAERISLTMQAVNRSRQVWLLVSGEEKKE CCCCCCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHH AAGQVFNGGNGAEWPAALASGTKATLLWVDEAANPLL HHCCEECCCCCCCCCHHHHCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]