Definition | Corynebacterium jeikeium K411, complete genome. |
---|---|
Accession | NC_007164 |
Length | 2,462,499 |
Click here to switch to the map view.
The map label for this gene is tkt [H]
Identifier: 68536069
GI number: 68536069
Start: 1172229
End: 1174319
Strand: Direct
Name: tkt [H]
Synonym: jk0992
Alternate gene names: 68536069
Gene position: 1172229-1174319 (Clockwise)
Preceding gene: 68536067
Following gene: 68536070
Centisome position: 47.6
GC content: 65.61
Gene sequence:
>2091_bases GTGACTCTCTCCCCAGAACAGCAGGCACTCACCGTGCGCAACTACCCAGCGGACTGGACGGAGACCGACACGCGCGCGGT CGACCTTGCCCGTGTGCTGGCCGCAGACGCAGTGGAAAACTGCGGCTCGGGCCACCCCGGCACGGCGATGAGCCTGGCGC CGCTGGCCTACACGCTGTACCAGCGCGTACTTCGCCACGATCCGCAGGACGTGCACTGGGTCGGTAGGGATCGCTTCGTA TTGTCTGCGGGCCACTCGTCTCTGACCCAGTACATCCAGCTGTACCTGGGTGGCTTCGGCTTGGAGCTGGAGGATCTTCA GGCCCTGCGCACCTGGGGGTCCAAGACCCCGGGCCACCCCGAGGTGCACCACACCGATGGCGTGGAGATCACCACCGGCC CGCTGGGCCAGGGACTGGCATCCGCGGTGGGTATGGCGATGGCCTCCCGCCGCGAGCGCGCATTGTTCGACCCTGAGGCT CCGGCCGGAGAGTCCCCATTCGACCACTTCATCTACGTCATCGCTTCCGACGGCGACGTCCAGGAGGGCGTGACTTCCGA GGCTTCCTCCCTGGCGGGTACCCAACAGCTGGGTAACCTCATTGTCTTCTGGGACGATAACGGCATCTCCATCGAGGACC AGACCGAGATTGCCTTTAACGAGGACGTCTCTGCTCGCTACGCCGCCTACGGCTGGCAGACCCTGGAGGTCACCGGTGAG GATGTCGAGGGAATCCTGGACGCGGTCGAGCGCGCCAAGGCAGAGACCTCCCGCCCAACCTTCATTCGCCTCCGTAGCGT CATTGCCTACCCAGCCCCGACGAAGATGGATACCGGTGCCTCCCACGGTGCGGCCCTCGGCGCGGAAGAGATCAAGGGCA TTAAGCAGGCCCTGGACTTCCCCGATGAGCCGTTCCCGGTGGAGGACAACGTAATCACCCACACCCGCGGTCTGATCGAT CGTGCCGCGGAGGCGCACAAGCAGTGGCAGGTTCTTTTTGACGCTTGGGCGGAGAACAACCCGGAGAACAAGGCTCTGTT CGACCGTCTGTACTCCCGCGAACTTCCGGAGGGCTTCGACGCCGAGGTTCCCAGCTGGGAGGCCGGGGAGTCCCTGGCCA CCCGCAAGGCTTCGGAGGCTACCCTGCAGGCTCTGGGGAAGACTTTGCCGGAGCTGTGGGGTGGTTCCGCTGACTTGGCT GGCTCCACCAACACCATCATTAAGGGCTCCCCGAGTTTCGGCCCGGAGGCCATCAGCACTCGCAATTTCACTGCGGAGCC GGGTGGCCGCAACCTGCACTTCGGTATCCGCGAGCACGGCATGGTCGCCATCCTGAACGGCATCGCCCTGCACGGCCCGA CTCGCCCTTACGGTGCGACGTTCCTGCAGTTCTCCGACTACGCACGCGGCGCGGTGCGCCTGGGCGCCCTGATGAAGTCG GATGTTTACCACGTGTGGACGCACGACTCCATTGGCCTGGGCGAGGACGGCCCCACCCACCAGCCAGTCGAGCACCTGGC ATCCCTGCGTGCAATCCCCCACCTGGCGGTTATCCGCCCGGCGGACGCTAACGAGACCGCTGCGGGCTGGGTGGCTGCCC TGCAGGCTGAGGAGTCCCCGAAGGCTCTGATCTTGACCCGCCAGAACGTCCCCGTGCTGGAGGGAACTCAACAGAAGGCT GCAGAGGGCGTGGCCCGCGGCGCGTACGTGTTGGTCGAGGAGTCGACGGACACTCCGGAGGTCATCCTGCTGGCCACCGG CTCCGAGGTGCAGCTGGCCGTGGAGGCCGCCAAGGAACTGGAGAGCCAGGGCGTGGGCACCCGCGTGGTCTCCATGCCGG TCATGGAGTGGTTCCTTGAGCAGGATGCCGAGTACCAAGAGCAGGTTCTGCCGAGCAACGTGACGGCTCGCGTGTCCGTG GAGGCCGGAATCGCCATGCCGTGGCACCGCTTTGTTGGCCTGAACGGCCGGACTATCTCTCTGGAGCACTACGGCGCTTC GGCCGACTACCAGACGCTCTACCGCGAGTTCGGCATCACTTCCGAGGCAGTCGTCGCTGCCGCGCACGACTCCATCGCGG CGAACAAGTAA
Upstream 100 bases:
>100_bases CCAAAAATCCGGGCGGCAATGGCGCCCACTAGCCACAGCAACGGGATACGCCCATTAGTATGTATTGGGTACTCAGCTTG ACGAAGAAAGGCAACTGACA
Downstream 100 bases:
>100_bases ACCCCACAACCCCACCCCAAGGACTGATTCCTTCTATGAGCACTCCCGCGAACATTAACGCACTCGCCAATGCCGGCACT TCCGTATGGCTGGACGACCT
Product: transketolase
Products: NA
Alternate protein names: TK [H]
Number of amino acids: Translated: 696; Mature: 695
Protein sequence:
>696_residues MTLSPEQQALTVRNYPADWTETDTRAVDLARVLAADAVENCGSGHPGTAMSLAPLAYTLYQRVLRHDPQDVHWVGRDRFV LSAGHSSLTQYIQLYLGGFGLELEDLQALRTWGSKTPGHPEVHHTDGVEITTGPLGQGLASAVGMAMASRRERALFDPEA PAGESPFDHFIYVIASDGDVQEGVTSEASSLAGTQQLGNLIVFWDDNGISIEDQTEIAFNEDVSARYAAYGWQTLEVTGE DVEGILDAVERAKAETSRPTFIRLRSVIAYPAPTKMDTGASHGAALGAEEIKGIKQALDFPDEPFPVEDNVITHTRGLID RAAEAHKQWQVLFDAWAENNPENKALFDRLYSRELPEGFDAEVPSWEAGESLATRKASEATLQALGKTLPELWGGSADLA GSTNTIIKGSPSFGPEAISTRNFTAEPGGRNLHFGIREHGMVAILNGIALHGPTRPYGATFLQFSDYARGAVRLGALMKS DVYHVWTHDSIGLGEDGPTHQPVEHLASLRAIPHLAVIRPADANETAAGWVAALQAEESPKALILTRQNVPVLEGTQQKA AEGVARGAYVLVEESTDTPEVILLATGSEVQLAVEAAKELESQGVGTRVVSMPVMEWFLEQDAEYQEQVLPSNVTARVSV EAGIAMPWHRFVGLNGRTISLEHYGASADYQTLYREFGITSEAVVAAAHDSIAANK
Sequences:
>Translated_696_residues MTLSPEQQALTVRNYPADWTETDTRAVDLARVLAADAVENCGSGHPGTAMSLAPLAYTLYQRVLRHDPQDVHWVGRDRFV LSAGHSSLTQYIQLYLGGFGLELEDLQALRTWGSKTPGHPEVHHTDGVEITTGPLGQGLASAVGMAMASRRERALFDPEA PAGESPFDHFIYVIASDGDVQEGVTSEASSLAGTQQLGNLIVFWDDNGISIEDQTEIAFNEDVSARYAAYGWQTLEVTGE DVEGILDAVERAKAETSRPTFIRLRSVIAYPAPTKMDTGASHGAALGAEEIKGIKQALDFPDEPFPVEDNVITHTRGLID RAAEAHKQWQVLFDAWAENNPENKALFDRLYSRELPEGFDAEVPSWEAGESLATRKASEATLQALGKTLPELWGGSADLA GSTNTIIKGSPSFGPEAISTRNFTAEPGGRNLHFGIREHGMVAILNGIALHGPTRPYGATFLQFSDYARGAVRLGALMKS DVYHVWTHDSIGLGEDGPTHQPVEHLASLRAIPHLAVIRPADANETAAGWVAALQAEESPKALILTRQNVPVLEGTQQKA AEGVARGAYVLVEESTDTPEVILLATGSEVQLAVEAAKELESQGVGTRVVSMPVMEWFLEQDAEYQEQVLPSNVTARVSV EAGIAMPWHRFVGLNGRTISLEHYGASADYQTLYREFGITSEAVVAAAHDSIAANK >Mature_695_residues TLSPEQQALTVRNYPADWTETDTRAVDLARVLAADAVENCGSGHPGTAMSLAPLAYTLYQRVLRHDPQDVHWVGRDRFVL SAGHSSLTQYIQLYLGGFGLELEDLQALRTWGSKTPGHPEVHHTDGVEITTGPLGQGLASAVGMAMASRRERALFDPEAP AGESPFDHFIYVIASDGDVQEGVTSEASSLAGTQQLGNLIVFWDDNGISIEDQTEIAFNEDVSARYAAYGWQTLEVTGED VEGILDAVERAKAETSRPTFIRLRSVIAYPAPTKMDTGASHGAALGAEEIKGIKQALDFPDEPFPVEDNVITHTRGLIDR AAEAHKQWQVLFDAWAENNPENKALFDRLYSRELPEGFDAEVPSWEAGESLATRKASEATLQALGKTLPELWGGSADLAG STNTIIKGSPSFGPEAISTRNFTAEPGGRNLHFGIREHGMVAILNGIALHGPTRPYGATFLQFSDYARGAVRLGALMKSD VYHVWTHDSIGLGEDGPTHQPVEHLASLRAIPHLAVIRPADANETAAGWVAALQAEESPKALILTRQNVPVLEGTQQKAA EGVARGAYVLVEESTDTPEVILLATGSEVQLAVEAAKELESQGVGTRVVSMPVMEWFLEQDAEYQEQVLPSNVTARVSVE AGIAMPWHRFVGLNGRTISLEHYGASADYQTLYREFGITSEAVVAAAHDSIAANK
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=586, Percent_Identity=25.938566552901, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI4507521, Length=586, Percent_Identity=25.938566552901, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI133778974, Length=585, Percent_Identity=24.7863247863248, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI225637459, Length=587, Percent_Identity=24.190800681431, Blast_Score=116, Evalue=7e-26, Organism=Homo sapiens, GI225637463, Length=490, Percent_Identity=25.7142857142857, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI225637461, Length=490, Percent_Identity=25.7142857142857, Blast_Score=115, Evalue=2e-25, Organism=Escherichia coli, GI48994911, Length=667, Percent_Identity=45.2773613193403, Blast_Score=555, Evalue=1e-159, Organism=Escherichia coli, GI1788808, Length=674, Percent_Identity=45.6973293768546, Blast_Score=545, Evalue=1e-156, Organism=Caenorhabditis elegans, GI17539652, Length=589, Percent_Identity=25.4668930390492, Blast_Score=152, Evalue=5e-37, Organism=Saccharomyces cerevisiae, GI6325331, Length=684, Percent_Identity=42.6900584795322, Blast_Score=513, Evalue=1e-146, Organism=Saccharomyces cerevisiae, GI6319593, Length=687, Percent_Identity=41.0480349344978, Blast_Score=499, Evalue=1e-142, Organism=Drosophila melanogaster, GI45551847, Length=599, Percent_Identity=27.3789649415693, Blast_Score=156, Evalue=4e-38, Organism=Drosophila melanogaster, GI45550715, Length=599, Percent_Identity=27.3789649415693, Blast_Score=156, Evalue=4e-38, Organism=Drosophila melanogaster, GI24645119, Length=547, Percent_Identity=27.4223034734918, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24666278, Length=586, Percent_Identity=24.7440273037543, Blast_Score=130, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 75155; Mature: 75024
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSPEQQALTVRNYPADWTETDTRAVDLARVLAADAVENCGSGHPGTAMSLAPLAYTLY CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH QRVLRHDPQDVHWVGRDRFVLSAGHSSLTQYIQLYLGGFGLELEDLQALRTWGSKTPGHP HHHHHCCCCCEEEECCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCC EVHHTDGVEITTGPLGQGLASAVGMAMASRRERALFDPEAPAGESPFDHFIYVIASDGDV CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCC QEGVTSEASSLAGTQQLGNLIVFWDDNGISIEDQTEIAFNEDVSARYAAYGWQTLEVTGE HHCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHCCCEEEEECCC DVEGILDAVERAKAETSRPTFIRLRSVIAYPAPTKMDTGASHGAALGAEEIKGIKQALDF HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC PDEPFPVEDNVITHTRGLIDRAAEAHKQWQVLFDAWAENNPENKALFDRLYSRELPEGFD CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC AEVPSWEAGESLATRKASEATLQALGKTLPELWGGSADLAGSTNTIIKGSPSFGPEAIST CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC RNFTAEPGGRNLHFGIREHGMVAILNGIALHGPTRPYGATFLQFSDYARGAVRLGALMKS CCCCCCCCCCEEEECCCCCCEEEEECCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHC DVYHVWTHDSIGLGEDGPTHQPVEHLASLRAIPHLAVIRPADANETAAGWVAALQAEESP CEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHEEECCCCC KALILTRQNVPVLEGTQQKAAEGVARGAYVLVEESTDTPEVILLATGSEVQLAVEAAKEL CEEEEEECCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCEEHHHHHHHHH ESQGVGTRVVSMPVMEWFLEQDAEYQEQVLPSNVTARVSVEAGIAMPWHRFVGLNGRTIS HHCCCCEEHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCCCEEE LEHYGASADYQTLYREFGITSEAVVAAAHDSIAANK EECCCCCCHHHHHHHHHCCCHHHHEEECCCHHCCCC >Mature Secondary Structure TLSPEQQALTVRNYPADWTETDTRAVDLARVLAADAVENCGSGHPGTAMSLAPLAYTLY CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH QRVLRHDPQDVHWVGRDRFVLSAGHSSLTQYIQLYLGGFGLELEDLQALRTWGSKTPGHP HHHHHCCCCCEEEECCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCC EVHHTDGVEITTGPLGQGLASAVGMAMASRRERALFDPEAPAGESPFDHFIYVIASDGDV CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCC QEGVTSEASSLAGTQQLGNLIVFWDDNGISIEDQTEIAFNEDVSARYAAYGWQTLEVTGE HHCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHCCCEEEEECCC DVEGILDAVERAKAETSRPTFIRLRSVIAYPAPTKMDTGASHGAALGAEEIKGIKQALDF HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC PDEPFPVEDNVITHTRGLIDRAAEAHKQWQVLFDAWAENNPENKALFDRLYSRELPEGFD CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC AEVPSWEAGESLATRKASEATLQALGKTLPELWGGSADLAGSTNTIIKGSPSFGPEAIST CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC RNFTAEPGGRNLHFGIREHGMVAILNGIALHGPTRPYGATFLQFSDYARGAVRLGALMKS CCCCCCCCCCEEEECCCCCCEEEEECCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHC DVYHVWTHDSIGLGEDGPTHQPVEHLASLRAIPHLAVIRPADANETAAGWVAALQAEESP CEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHEEECCCCC KALILTRQNVPVLEGTQQKAAEGVARGAYVLVEESTDTPEVILLATGSEVQLAVEAAKEL CEEEEEECCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCEEHHHHHHHHH ESQGVGTRVVSMPVMEWFLEQDAEYQEQVLPSNVTARVSVEAGIAMPWHRFVGLNGRTIS HHCCCCEEHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCCCEEE LEHYGASADYQTLYREFGITSEAVVAAAHDSIAANK EECCCCCCHHHHHHHHHCCCHHHHEEECCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]