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The map label for this gene is ydjX [C]

Identifier: 68536038

GI number: 68536038

Start: 1137328

End: 1138035

Strand: Direct

Name: ydjX [C]

Synonym: jk0961

Alternate gene names: 68536038

Gene position: 1137328-1138035 (Clockwise)

Preceding gene: 68536036

Following gene: 68536039

Centisome position: 46.19

GC content: 60.31

Gene sequence:

>708_bases
ATGAAAATCCCACGCTTTGTAGGCCACGCCTTTAGCGCGTGGTGGGGGCTAAAGCTACGGTACCGCTTCTTAAGCGTCCT
CGTTCCGATCCTGCTGGTCGCTTTCGTTTACTTCGTCCCGAAGCCCGCCGTCGACGATATTCGTACCTGGGTAGATTCCA
CGGGTGCGTGGGCGCCGCTGACTTTCGTGGTGCTGTTGGTCGCTTTTACCCAGTTGCCGCTCCCCCGCACCATCTGGACC
ATCGCTGCGGGCGTGATGTTTGGATCCCTGTGGGGCTCGGTGCTGGCGCTGGTGGGTGTGGGCGCTTCTGCCGCATTGTC
CCTGATCTTAGTGCATGCCGTCGGCGGGACGTGGGTGGAAAAGAAGACCCGCAACGACCAACGCATCCAGCTATTGCAGG
AAAGGATCGCCGAGCGCGGCTGGATCGCCGTCCTGGGTATGCGCATGGTTCCGGCCATTCCCTTTTCACTGCTGAACTAT
GCCTGTGGGCTGAGTCGCATCCCGTTTGTCCCCTATGTTCTGGCAACGATCTTCGGTTCCGCGCCGAACACCATCGCCAC
GGCCATGGCCTCCGACGCGCTAGCGACGGGTGGCCAGCCGTGGATTCTGCTCCTCAGCGTTGTAGTCGTATGCGCCGGCT
TTGCACTCGCCGCCAACGAGATTCGACTCTGGCGGAAGCTGCGTAAAGCCGATGAAGTAGGTTTATAA

Upstream 100 bases:

>100_bases
CGCAACCCAAGTCCGGGTGGCGGAATGGCAGACGCGCTAGCTTGAGGTGCTAGTGTCCTATTAACGGACGTGGGGGTTCA
AGTCCCCCTCCGGACACAAC

Downstream 100 bases:

>100_bases
CCATGTTTGCCGTGTATGCCGCCTACCGGGGCCGTTCGCAACGCCGTGGAGAATACGTCCGCGACGTCGCGGCGGCGCTG
GAGCGTTCCTCGATGGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKIPRFVGHAFSAWWGLKLRYRFLSVLVPILLVAFVYFVPKPAVDDIRTWVDSTGAWAPLTFVVLLVAFTQLPLPRTIWT
IAAGVMFGSLWGSVLALVGVGASAALSLILVHAVGGTWVEKKTRNDQRIQLLQERIAERGWIAVLGMRMVPAIPFSLLNY
ACGLSRIPFVPYVLATIFGSAPNTIATAMASDALATGGQPWILLLSVVVVCAGFALAANEIRLWRKLRKADEVGL

Sequences:

>Translated_235_residues
MKIPRFVGHAFSAWWGLKLRYRFLSVLVPILLVAFVYFVPKPAVDDIRTWVDSTGAWAPLTFVVLLVAFTQLPLPRTIWT
IAAGVMFGSLWGSVLALVGVGASAALSLILVHAVGGTWVEKKTRNDQRIQLLQERIAERGWIAVLGMRMVPAIPFSLLNY
ACGLSRIPFVPYVLATIFGSAPNTIATAMASDALATGGQPWILLLSVVVVCAGFALAANEIRLWRKLRKADEVGL
>Mature_235_residues
MKIPRFVGHAFSAWWGLKLRYRFLSVLVPILLVAFVYFVPKPAVDDIRTWVDSTGAWAPLTFVVLLVAFTQLPLPRTIWT
IAAGVMFGSLWGSVLALVGVGASAALSLILVHAVGGTWVEKKTRNDQRIQLLQERIAERGWIAVLGMRMVPAIPFSLLNY
ACGLSRIPFVPYVLATIFGSAPNTIATAMASDALATGGQPWILLLSVVVVCAGFALAANEIRLWRKLRKADEVGL

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=187, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1788049, Length=196, Percent_Identity=31.1224489795918, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25628; Mature: 25628

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPRFVGHAFSAWWGLKLRYRFLSVLVPILLVAFVYFVPKPAVDDIRTWVDSTGAWAPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
TFVVLLVAFTQLPLPRTIWTIAAGVMFGSLWGSVLALVGVGASAALSLILVHAVGGTWVE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHH
KKTRNDQRIQLLQERIAERGWIAVLGMRMVPAIPFSLLNYACGLSRIPFVPYVLATIFGS
HHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
APNTIATAMASDALATGGQPWILLLSVVVVCAGFALAANEIRLWRKLRKADEVGL
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIPRFVGHAFSAWWGLKLRYRFLSVLVPILLVAFVYFVPKPAVDDIRTWVDSTGAWAPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
TFVVLLVAFTQLPLPRTIWTIAAGVMFGSLWGSVLALVGVGASAALSLILVHAVGGTWVE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHH
KKTRNDQRIQLLQERIAERGWIAVLGMRMVPAIPFSLLNYACGLSRIPFVPYVLATIFGS
HHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
APNTIATAMASDALATGGQPWILLLSVVVVCAGFALAANEIRLWRKLRKADEVGL
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]