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The map label for this gene is sopA [C]

Identifier: 68535951

GI number: 68535951

Start: 1044466

End: 1045359

Strand: Direct

Name: sopA [C]

Synonym: jk0874

Alternate gene names: 68535951

Gene position: 1044466-1045359 (Clockwise)

Preceding gene: 68535950

Following gene: 68535952

Centisome position: 42.41

GC content: 60.63

Gene sequence:

>894_bases
ATGTCACGTTCACAGTCACACGCGGATGCGTTGTTTGATAAGCCCGATCAGCGCATCGGCCTGACCGGACGACCGATCAA
GGAACTGCCGGACCCCGAACCGTTGGATCGCCACGGTCCGGCCTCCATCATCGCGATGTGCAACCAGAAGGGCGGGGTGG
GTAAGACCACTTCGACGATCAACATCGGTGCTTCGCTGGCCGCGTTCGGCCGAAAGGTACTGCTGGTGGATCTGGATCCA
CAGGGCGCCCTGTCTGCAGGCCTGGGCATTAGCCACGACGAGTTGGACGTTACGGTCTACAACCTGTTGGTCGATTCTTC
TGCCTCTATTCTGGACGCCATCCACTCCAGCCCCGTCGACGGTCTGGATGTTGTTCCGGCGAATATCGACCTGTCGGCTG
CGGAGATCCAGTTGGTGAACGAGGTCGGCCGTGAGCAAGCCCTGGCTCGCGCGCTGCGGCCCGTGATGCGCGACTACGAC
TTCATCATCGTCGACTGCCAGCCTTCCCTCGGCCTGCTGACGGTCAACGCGCTGAGCTGTGCGGATTCGGTGATCATTCC
GGTGGAATCCGAGTACTTCTCCCTGCGTGGCCTGGCACTACTGATGGACACGGTGGATAAGGTCCGCGACCGCCTGAATT
TCAAGCTCGAAGTGCTGGGCATTCTAGTGACGATGTTTGACCGCCGAACCCTCCATGCCCGCGAGGTGATGGAGCGGCTG
GTGGAAGCGTTCGGGGATAAGGTTTTCGATTCCGTCATCACCCGCACCGTGCGCTTCCCAGAGACTTCGGTGGCCGGCGA
GCCGATCAACACCTGGGCGCCGAGCTCTTCTGGCGCGGTGCAATACTCGAATCTGGCGAAGGAAGTCATTGAGCGCGTCG
CTCAGCAAATCTAG

Upstream 100 bases:

>100_bases
GGCCTCATCTCACCCCCGTACCTAGTGCGCCTGATAATCTCTAGGGTGTAATTAAAGGCTATTTATCACAATCAAGGGAA
AGGGCTTGACGGGATCGCCG

Downstream 100 bases:

>100_bases
CCAGCCCGTGCAGGAGCCAGGGCAGCCAGAGCAGCCCGAGCAGCCGGAAATCACCGGCTTCCGGGTGGCACTGGCTAACT
TCGATGGCCCCTTCGACCTG

Product: putative partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSRSQSHADALFDKPDQRIGLTGRPIKELPDPEPLDRHGPASIIAMCNQKGGVGKTTSTINIGASLAAFGRKVLLVDLDP
QGALSAGLGISHDELDVTVYNLLVDSSASILDAIHSSPVDGLDVVPANIDLSAAEIQLVNEVGREQALARALRPVMRDYD
FIIVDCQPSLGLLTVNALSCADSVIIPVESEYFSLRGLALLMDTVDKVRDRLNFKLEVLGILVTMFDRRTLHAREVMERL
VEAFGDKVFDSVITRTVRFPETSVAGEPINTWAPSSSGAVQYSNLAKEVIERVAQQI

Sequences:

>Translated_297_residues
MSRSQSHADALFDKPDQRIGLTGRPIKELPDPEPLDRHGPASIIAMCNQKGGVGKTTSTINIGASLAAFGRKVLLVDLDP
QGALSAGLGISHDELDVTVYNLLVDSSASILDAIHSSPVDGLDVVPANIDLSAAEIQLVNEVGREQALARALRPVMRDYD
FIIVDCQPSLGLLTVNALSCADSVIIPVESEYFSLRGLALLMDTVDKVRDRLNFKLEVLGILVTMFDRRTLHAREVMERL
VEAFGDKVFDSVITRTVRFPETSVAGEPINTWAPSSSGAVQYSNLAKEVIERVAQQI
>Mature_296_residues
SRSQSHADALFDKPDQRIGLTGRPIKELPDPEPLDRHGPASIIAMCNQKGGVGKTTSTINIGASLAAFGRKVLLVDLDPQ
GALSAGLGISHDELDVTVYNLLVDSSASILDAIHSSPVDGLDVVPANIDLSAAEIQLVNEVGREQALARALRPVMRDYDF
IIVDCQPSLGLLTVNALSCADSVIIPVESEYFSLRGLALLMDTVDKVRDRLNFKLEVLGILVTMFDRRTLHAREVMERLV
EAFGDKVFDSVITRTVRFPETSVAGEPINTWAPSSSGAVQYSNLAKEVIERVAQQI

Specific function: May play a role in septum formation [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 32158; Mature: 32027

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSQSHADALFDKPDQRIGLTGRPIKELPDPEPLDRHGPASIIAMCNQKGGVGKTTSTI
CCCCCHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHEECCCCCCCCCCCEE
NIGASLAAFGRKVLLVDLDPQGALSAGLGISHDELDVTVYNLLVDSSASILDAIHSSPVD
ECCHHHHHCCCEEEEEEECCCCCHHHCCCCCCCHHHEEEEEHHHCCCHHHHHHHHCCCCC
GLDVVPANIDLSAAEIQLVNEVGREQALARALRPVMRDYDFIIVDCQPSLGLLTVNALSC
CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEHHHC
ADSVIIPVESEYFSLRGLALLMDTVDKVRDRLNFKLEVLGILVTMFDRRTLHAREVMERL
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
VEAFGDKVFDSVITRTVRFPETSVAGEPINTWAPSSSGAVQYSNLAKEVIERVAQQI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRSQSHADALFDKPDQRIGLTGRPIKELPDPEPLDRHGPASIIAMCNQKGGVGKTTSTI
CCCCHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHEECCCCCCCCCCCEE
NIGASLAAFGRKVLLVDLDPQGALSAGLGISHDELDVTVYNLLVDSSASILDAIHSSPVD
ECCHHHHHCCCEEEEEEECCCCCHHHCCCCCCCHHHEEEEEHHHCCCHHHHHHHHCCCCC
GLDVVPANIDLSAAEIQLVNEVGREQALARALRPVMRDYDFIIVDCQPSLGLLTVNALSC
CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEHHHC
ADSVIIPVESEYFSLRGLALLMDTVDKVRDRLNFKLEVLGILVTMFDRRTLHAREVMERL
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
VEAFGDKVFDSVITRTVRFPETSVAGEPINTWAPSSSGAVQYSNLAKEVIERVAQQI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]