Click here to switch to the map view.

The map label for this gene is nagD [H]

Identifier: 68535939

GI number: 68535939

Start: 1031401

End: 1032408

Strand: Direct

Name: nagD [H]

Synonym: jk0862

Alternate gene names: 68535939

Gene position: 1031401-1032408 (Clockwise)

Preceding gene: 68535938

Following gene: 68535940

Centisome position: 41.88

GC content: 62.5

Gene sequence:

>1008_bases
ATGGCACACCCGTTGCTGGATAACTACGACGCTTTGCTGGCCGACCTCGACGGCACTGTATTCTCGGGCCACACCCCAAT
TCCAGGTGCGGCAGAAGGCTTGGCAGGTCGCAAGGTCATGTACGTAACCAACAACGCCTCGCGCTCTCCGCAACAGGTCG
CCGAGCACCTGAATTCAATGGGCTTCCCGGCAGAGGCCGATAACGTGGTTACCTCAGCTATGGCCGCCTGCGACCTCGGC
AAGCGATATATCTCCGAGGCCGGCATCGAAAGCCCTGTGGCCTACGTGATCGGCCACGACTCCTTCAAGCAGCTGGTGGC
CGACGCTGGCTTTAGAGTAACGGAGACCGCCGACGACCAGCCTCACGTTGTCTTCCACGGACACAGCCCCGACAACAACT
GGACACGGCTTTCAGAAGGTGCCCTGGCTATCCAACGCGGAGCCCGGTACTTCGCCTCTAACTTGGATACCACCTTGCCC
TCCGAGCGCGGGTTCTTGGTCGGCAATGGCTCGATGGTGGCGGCCGTGACCTCTGCCACGGGAGTCACCCCTGAATCGGC
TGGCAAGCCCGGCCCCGCTATGTTCGAAGTCGCCGCCCGCCGCGTCGGTTCTACAAAGCCCCTGGCCGTCGGCGATCGCC
TGGATACCGACATCGCAGGTGGTAACGCCGCGGGGATCGACACGCTCTGTACCGTCACTGGTGTGTCTACCCACACCGAA
ATTATTGACGCCCCCTCGTCCCACCGACCCACGTTTATTGCAGGTAACCTACGCGACCACCTGCCGGGGTGGTCTGCGAG
CGTGGACGAGGGAACTAACCGCATCCGCGTGACCGCCGGCGAGCTGGGAGACGTGGAAGTCATGGCCGCCGAAGCGTTGG
CCGTGGCTGCGCCGCTGGCGTGGAAGCTGATCGACGACCCGGAGATCCCGCAGATCACTAGGGCTGAGAACATCGACTTT
GTAGGCGCAGACGCGCAAGCCATGGAGGCTTTGGGAGGTTGGAAGTAA

Upstream 100 bases:

>100_bases
AGGCGAAATGGATACCGAGGAAGTCCTGGACGTCCCGGATCGCCTGGCTGAACTGGGCGCGGACTCTAACGGTGCAGAGC
AGATCGAGGATAAGTAGCCC

Downstream 100 bases:

>100_bases
GTGGGCGAGGGGCAACCGAAACCTTCGATGCTGTCGGGGGACAGTAGGCGTCAACAAGAAGAGCTGGCACAGGCCGTCGA
CGAGCTACTCGCGCGCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MAHPLLDNYDALLADLDGTVFSGHTPIPGAAEGLAGRKVMYVTNNASRSPQQVAEHLNSMGFPAEADNVVTSAMAACDLG
KRYISEAGIESPVAYVIGHDSFKQLVADAGFRVTETADDQPHVVFHGHSPDNNWTRLSEGALAIQRGARYFASNLDTTLP
SERGFLVGNGSMVAAVTSATGVTPESAGKPGPAMFEVAARRVGSTKPLAVGDRLDTDIAGGNAAGIDTLCTVTGVSTHTE
IIDAPSSHRPTFIAGNLRDHLPGWSASVDEGTNRIRVTAGELGDVEVMAAEALAVAAPLAWKLIDDPEIPQITRAENIDF
VGADAQAMEALGGWK

Sequences:

>Translated_335_residues
MAHPLLDNYDALLADLDGTVFSGHTPIPGAAEGLAGRKVMYVTNNASRSPQQVAEHLNSMGFPAEADNVVTSAMAACDLG
KRYISEAGIESPVAYVIGHDSFKQLVADAGFRVTETADDQPHVVFHGHSPDNNWTRLSEGALAIQRGARYFASNLDTTLP
SERGFLVGNGSMVAAVTSATGVTPESAGKPGPAMFEVAARRVGSTKPLAVGDRLDTDIAGGNAAGIDTLCTVTGVSTHTE
IIDAPSSHRPTFIAGNLRDHLPGWSASVDEGTNRIRVTAGELGDVEVMAAEALAVAAPLAWKLIDDPEIPQITRAENIDF
VGADAQAMEALGGWK
>Mature_334_residues
AHPLLDNYDALLADLDGTVFSGHTPIPGAAEGLAGRKVMYVTNNASRSPQQVAEHLNSMGFPAEADNVVTSAMAACDLGK
RYISEAGIESPVAYVIGHDSFKQLVADAGFRVTETADDQPHVVFHGHSPDNNWTRLSEGALAIQRGARYFASNLDTTLPS
ERGFLVGNGSMVAAVTSATGVTPESAGKPGPAMFEVAARRVGSTKPLAVGDRLDTDIAGGNAAGIDTLCTVTGVSTHTEI
IDAPSSHRPTFIAGNLRDHLPGWSASVDEGTNRIRVTAGELGDVEVMAAEALAVAAPLAWKLIDDPEIPQITRAENIDFV
GADAQAMEALGGWK

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. NagD family [H]

Homologues:

Organism=Homo sapiens, GI108796653, Length=300, Percent_Identity=30, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI10092677, Length=252, Percent_Identity=28.5714285714286, Blast_Score=90, Evalue=3e-18,
Organism=Escherichia coli, GI1786890, Length=249, Percent_Identity=31.3253012048193, Blast_Score=110, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI193210059, Length=283, Percent_Identity=29.6819787985866, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI86563050, Length=252, Percent_Identity=29.7619047619048, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71984613, Length=273, Percent_Identity=25.2747252747253, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562458, Length=290, Percent_Identity=22.0689655172414, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17560956, Length=290, Percent_Identity=22.0689655172414, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17558880, Length=290, Percent_Identity=22.0689655172414, Blast_Score=74, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6319965, Length=247, Percent_Identity=25.5060728744939, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24641437, Length=260, Percent_Identity=27.3076923076923, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24656330, Length=276, Percent_Identity=25.3623188405797, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24666141, Length=257, Percent_Identity=22.568093385214, Blast_Score=68, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR006354
- InterPro:   IPR023215 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 34995; Mature: 34864

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHPLLDNYDALLADLDGTVFSGHTPIPGAAEGLAGRKVMYVTNNASRSPQQVAEHLNSM
CCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHC
GFPAEADNVVTSAMAACDLGKRYISEAGIESPVAYVIGHDSFKQLVADAGFRVTETADDQ
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHCCCEEEECCCCC
PHVVFHGHSPDNNWTRLSEGALAIQRGARYFASNLDTTLPSERGFLVGNGSMVAAVTSAT
CEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCC
GVTPESAGKPGPAMFEVAARRVGSTKPLAVGDRLDTDIAGGNAAGIDTLCTVTGVSTHTE
CCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHEEEECCCCCCHH
IIDAPSSHRPTFIAGNLRDHLPGWSASVDEGTNRIRVTAGELGDVEVMAAEALAVAAPLA
EECCCCCCCCEEEECCHHHHCCCCCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHCCE
WKLIDDPEIPQITRAENIDFVGADAQAMEALGGWK
EEECCCCCCCCCCCCCCCCEECCCHHHHHHHCCCC
>Mature Secondary Structure 
AHPLLDNYDALLADLDGTVFSGHTPIPGAAEGLAGRKVMYVTNNASRSPQQVAEHLNSM
CCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHC
GFPAEADNVVTSAMAACDLGKRYISEAGIESPVAYVIGHDSFKQLVADAGFRVTETADDQ
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHCCCEEEECCCCC
PHVVFHGHSPDNNWTRLSEGALAIQRGARYFASNLDTTLPSERGFLVGNGSMVAAVTSAT
CEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCC
GVTPESAGKPGPAMFEVAARRVGSTKPLAVGDRLDTDIAGGNAAGIDTLCTVTGVSTHTE
CCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHEEEECCCCCCHH
IIDAPSSHRPTFIAGNLRDHLPGWSASVDEGTNRIRVTAGELGDVEVMAAEALAVAAPLA
EECCCCCCCCEEEECCHHHHCCCCCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHCCE
WKLIDDPEIPQITRAENIDFVGADAQAMEALGGWK
EEECCCCCCCCCCCCCCCCEECCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA