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The map label for this gene is hslR [H]

Identifier: 68535851

GI number: 68535851

Start: 928065

End: 928460

Strand: Direct

Name: hslR [H]

Synonym: jk0776

Alternate gene names: 68535851

Gene position: 928065-928460 (Clockwise)

Preceding gene: 68535850

Following gene: 68535856

Centisome position: 37.69

GC content: 69.19

Gene sequence:

>396_bases
TTGGCCAGCCCCGCAACTTCTAGCCCATCCAACACTCCCAGTAAAGTCCGCATCGATGCCTGGGTGTGGGCCGTTCGCCT
ATGCAAGACTCGCGCCCAGGCCGCGGAGGCCTGCCGCGCCGGGCACGTGAAGATCAACGACGTTTCGGTTAAGCCCGCCC
AGCCGGTCGTGGTGGGCGATACGGTGCGCGTGTGGATCCACCACCGCGAGCACATCGTGGAGGTCACGCAGCTGCTTTCC
AAGCGCGTGGGCGCGGAGCTTGCCCGCAAGGCCTACATCGACCATTCGCCGCCCCCGCCGGTGATCCCCGCCATGCCGCG
CCGGGATCGGGGAGCCGGCCGCCCGACGAAGCGGGAGCGCCGCCAGCTGGAGCGCTTCAAGCGCGGCCAGCTCTAG

Upstream 100 bases:

>100_bases
CGCCATTATCGTGCCGATCCTGGCGGTGGCGTTCATTGCCTACAGCGGCTTTAAGATCAAGGGCATCGTCGAGCACAAAG
ATCAGTGGTGACGCACCCCG

Downstream 100 bases:

>100_bases
CCAGTTTTCTGCCCCAGCTGCTGCCACCTGTTGCCCAGCCTGCCGGGGCGCGACTGCGCATTGTCGCCAATGTGTACCGT
CTTGCGGATGTGCTCGCGCC

Product: putative ribosome-associated heat shock protein

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MASPATSSPSNTPSKVRIDAWVWAVRLCKTRAQAAEACRAGHVKINDVSVKPAQPVVVGDTVRVWIHHREHIVEVTQLLS
KRVGAELARKAYIDHSPPPPVIPAMPRRDRGAGRPTKRERRQLERFKRGQL

Sequences:

>Translated_131_residues
MASPATSSPSNTPSKVRIDAWVWAVRLCKTRAQAAEACRAGHVKINDVSVKPAQPVVVGDTVRVWIHHREHIVEVTQLLS
KRVGAELARKAYIDHSPPPPVIPAMPRRDRGAGRPTKRERRQLERFKRGQL
>Mature_130_residues
ASPATSSPSNTPSKVRIDAWVWAVRLCKTRAQAAEACRAGHVKINDVSVKPAQPVVVGDTVRVWIHHREHIVEVTQLLSK
RVGAELARKAYIDHSPPPPVIPAMPRRDRGAGRPTKRERRQLERFKRGQL

Specific function: May play a important role in binding of nucleic acid. More specific for RNA [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 14663; Mature: 14532

Theoretical pI: Translated: 11.79; Mature: 11.79

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPATSSPSNTPSKVRIDAWVWAVRLCKTRAQAAEACRAGHVKINDVSVKPAQPVVVGD
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECC
TVRVWIHHREHIVEVTQLLSKRVGAELARKAYIDHSPPPPVIPAMPRRDRGAGRPTKRER
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
RQLERFKRGQL
HHHHHHHCCCC
>Mature Secondary Structure 
ASPATSSPSNTPSKVRIDAWVWAVRLCKTRAQAAEACRAGHVKINDVSVKPAQPVVVGD
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECC
TVRVWIHHREHIVEVTQLLSKRVGAELARKAYIDHSPPPPVIPAMPRRDRGAGRPTKRER
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
RQLERFKRGQL
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]