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The map label for this gene is recO [H]

Identifier: 68535681

GI number: 68535681

Start: 735421

End: 736170

Strand: Direct

Name: recO [H]

Synonym: jk0609

Alternate gene names: 68535681

Gene position: 735421-736170 (Clockwise)

Preceding gene: 68535680

Following gene: 68535682

Centisome position: 29.86

GC content: 67.2

Gene sequence:

>750_bases
ATGAGTAGAAGGTCTCGTCCCAGCTTCCGGGACGAGGCCTTTGTGCTTCGCACCTACAAACTGGGCGAGGCCGACCTGAT
CCTCGTCCTGCTCACCAGGGACAATGGCCTGATCCGCGCCGTAGCCAAGGGCATCCGCAAAACCCGCTCCCGCTTCGGCG
CCCGGCTGGATCGCTTTTCCCGCGTTGACGTGCAGATTTATCCTGGCCGTTCACTGGCCAACGTCACCGACGCCGCCACC
GTCGCCACCTACGCCTCGCCGATCGTCGCGGATGTCGATCGCTTCTACGCGGGGGCGGCGATGCTGGAGATGGCCCAGGT
CTTTGCCGCCGAGCCCTCGTCGGCGCACTCGATCTTTTTTCTTCTGGACGCCGCGCTCCAGCAACTAACCACCTCAGCCC
TCCCTCCGGTCAGCGTGGCCGACGAGTTCGTGCTGCACGGCCTGGAAGTCGCCGGCTGGGAGCCGAGCCTGGTCGACTGC
GCGCAGTGCGGCAAGCGCGGCCCCCACCGGGCGTTCCACCCGGGAGCCGGGGGCGCGGTGTGCGTGACGTGCAGGCCCCC
GGGCGCGTTCACGCCGCCATCGGCGGCGGTACACGCCCTGTGGCTGCTGAAGAAGGGGCGTCACGAACAAGCAGCCCAAG
TATTCCGCGACCAGCAGGGGCAAGACATCGCGGCACAATCGCATCGCCTGCTGTTGGCACACGTGCGGCAGCAGCTGGAG
GTAGGCTGCCCGGCTTACGCAGCGCTATAG

Upstream 100 bases:

>100_bases
CCAGCACCGCTGCCGCGTGGGCTCGCATCAAGCAGCGGGGTATGTCCGCCTAGCTTGTCTAAGCCCGATCACTGTGGTGC
AAGCGCTATACTTGCTGCCT

Downstream 100 bases:

>100_bases
GGTTAGTGGTGCGCGTGTGGCAATATAGTACGGGTGAGTAGCACTGATTATCCGCACGTGGACCGTTCCGAGATTCCGCC
GGAGCTCCGCCCGAAGCACA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSRRSRPSFRDEAFVLRTYKLGEADLILVLLTRDNGLIRAVAKGIRKTRSRFGARLDRFSRVDVQIYPGRSLANVTDAAT
VATYASPIVADVDRFYAGAAMLEMAQVFAAEPSSAHSIFFLLDAALQQLTTSALPPVSVADEFVLHGLEVAGWEPSLVDC
AQCGKRGPHRAFHPGAGGAVCVTCRPPGAFTPPSAAVHALWLLKKGRHEQAAQVFRDQQGQDIAAQSHRLLLAHVRQQLE
VGCPAYAAL

Sequences:

>Translated_249_residues
MSRRSRPSFRDEAFVLRTYKLGEADLILVLLTRDNGLIRAVAKGIRKTRSRFGARLDRFSRVDVQIYPGRSLANVTDAAT
VATYASPIVADVDRFYAGAAMLEMAQVFAAEPSSAHSIFFLLDAALQQLTTSALPPVSVADEFVLHGLEVAGWEPSLVDC
AQCGKRGPHRAFHPGAGGAVCVTCRPPGAFTPPSAAVHALWLLKKGRHEQAAQVFRDQQGQDIAAQSHRLLLAHVRQQLE
VGCPAYAAL
>Mature_248_residues
SRRSRPSFRDEAFVLRTYKLGEADLILVLLTRDNGLIRAVAKGIRKTRSRFGARLDRFSRVDVQIYPGRSLANVTDAATV
ATYASPIVADVDRFYAGAAMLEMAQVFAAEPSSAHSIFFLLDAALQQLTTSALPPVSVADEFVLHGLEVAGWEPSLVDCA
QCGKRGPHRAFHPGAGGAVCVTCRPPGAFTPPSAAVHALWLLKKGRHEQAAQVFRDQQGQDIAAQSHRLLLAHVRQQLEV
GCPAYAAL

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 26971; Mature: 26840

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRSRPSFRDEAFVLRTYKLGEADLILVLLTRDNGLIRAVAKGIRKTRSRFGARLDRFS
CCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
RVDVQIYPGRSLANVTDAATVATYASPIVADVDRFYAGAAMLEMAQVFAAEPSSAHSIFF
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLDAALQQLTTSALPPVSVADEFVLHGLEVAGWEPSLVDCAQCGKRGPHRAFHPGAGGAV
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEE
CVTCRPPGAFTPPSAAVHALWLLKKGRHEQAAQVFRDQQGQDIAAQSHRLLLAHVRQQLE
EEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VGCPAYAAL
CCCCHHHCC
>Mature Secondary Structure 
SRRSRPSFRDEAFVLRTYKLGEADLILVLLTRDNGLIRAVAKGIRKTRSRFGARLDRFS
CCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
RVDVQIYPGRSLANVTDAATVATYASPIVADVDRFYAGAAMLEMAQVFAAEPSSAHSIFF
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLDAALQQLTTSALPPVSVADEFVLHGLEVAGWEPSLVDCAQCGKRGPHRAFHPGAGGAV
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEE
CVTCRPPGAFTPPSAAVHALWLLKKGRHEQAAQVFRDQQGQDIAAQSHRLLLAHVRQQLE
EEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VGCPAYAAL
CCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA