| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is oprO [H]
Identifier: 66767144
GI number: 66767144
Start: 970579
End: 971772
Strand: Reverse
Name: oprO [H]
Synonym: XC_0811
Alternate gene names: 66767144
Gene position: 971772-970579 (Counterclockwise)
Preceding gene: 66767148
Following gene: 66767143
Centisome position: 18.87
GC content: 65.16
Gene sequence:
>1194_bases GTGATCAACGACACCTTGCGCTTGCGCGCCATTACCGCCTGTGCGGCCATCTGTCTGGCGCCGGCGGCACACGCGGCCGA TGACGAAGGCCCGGTGACCGCCGAAGTGGGCGGGCGCGTGCATTGGGACTTCACCGTCTTCGACAACGATGAACGCGGCA CACCCGAGCGTAACGACACCCAATTCCGCCGTGTCTGGCTGGACGTGGCCGGCAAGTTCTACGGGTTCAACTACAAGGCC GAGGCGGAGTTCGCCGGCCTGCAGTACGAACCCGGCAGCCGCGGCATCCTGGCACGCGATGTCTACATTGCCAAGAAGTT CTCCGCCGGCACGCTGACCGTGGGCCAGTTCAAGCAGTACTTCTCGCTGGACGACCGGACCGGCTCCAACTATGGCCCGT TCCTGGAACGCGGCTACGCCTCGACCACGCTGGCACCGATCTACCGCAAGGCGATTTCCTGGCAGACCAGCCGCCCGGAT GCCACCTGGTCCACGGCCGCCTACAGCCTGGAAAGCATCGACAATTCGGCCACCAAGGGCGGTGCGCTGGGCACGCGTCT GACCTTCGCACCGGAAATGGGCGACGCGCGGCTACGCCATCTGGGCGTGTCGCTGGCGCATGAGCGCTATTCGCATCCCG GCAGTGGCGGCGCCTCACCGCTGCTGATCCGCCCGCGCCCGGAGAACGATCTCGCCAACAACAGCCGCATCACGCTGGCA CGCTTCGCCGATGGCCGCGACACCGACTTCGACAAATGGTCGTTGGAATATGCCGAAGTAGTCGGCCCGTGGTCGTGGCA GACCGAGTTCAGCGGCGGCCTGCTCGACGATGGCGCGCAGCATGCCAAGGTGCTGGCCAGCTATGGCCTGGTCAGCTGGT TCGTGACCGGCGAGTCGCGCGGCTACGACCGCAAGACCGGCCGCTTCAGCCGCATCAAGACGCCCAACCGCCCGTCCGGC GCATTCGAGCTGGCACTGCGTTACGACTACATGCGCGGCGACCAGCATCTGGATGGCCAGCCCGATTTCATCAACGCCAG CACGCAGTCCTGGACGCTGGGCGGCAACTGGTATTTCAAGCCGAACCTGCGCGTGATGCTCAACGTCATCGACAGCCGCA ACCGCGACCGCACGATGAATGCAGTGGTCGATCATACGTTGGCCGTCACCGGCCGCTTCCAGTACGACTTCTAA
Upstream 100 bases:
>100_bases GTCCATGACAGCTTCGCGGGACTAGGCTGCAGCCAGCTCGCCGTGACGCGGTTGCGGCCGATTGACTGCCTGTGCTGCAC ACATGTACCTGGGAGGGTCT
Downstream 100 bases:
>100_bases GTGGCCTGCATCTTCGCCCTGCGTCATCCCGCGTCTGTGCCCCGCCACTGCAGCGGCGCGCTGCCGTCCGCCAATGCGGT GGCCTGTACCTTGCTGCATG
Product: porin O
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MINDTLRLRAITACAAICLAPAAHAADDEGPVTAEVGGRVHWDFTVFDNDERGTPERNDTQFRRVWLDVAGKFYGFNYKA EAEFAGLQYEPGSRGILARDVYIAKKFSAGTLTVGQFKQYFSLDDRTGSNYGPFLERGYASTTLAPIYRKAISWQTSRPD ATWSTAAYSLESIDNSATKGGALGTRLTFAPEMGDARLRHLGVSLAHERYSHPGSGGASPLLIRPRPENDLANNSRITLA RFADGRDTDFDKWSLEYAEVVGPWSWQTEFSGGLLDDGAQHAKVLASYGLVSWFVTGESRGYDRKTGRFSRIKTPNRPSG AFELALRYDYMRGDQHLDGQPDFINASTQSWTLGGNWYFKPNLRVMLNVIDSRNRDRTMNAVVDHTLAVTGRFQYDF
Sequences:
>Translated_397_residues MINDTLRLRAITACAAICLAPAAHAADDEGPVTAEVGGRVHWDFTVFDNDERGTPERNDTQFRRVWLDVAGKFYGFNYKA EAEFAGLQYEPGSRGILARDVYIAKKFSAGTLTVGQFKQYFSLDDRTGSNYGPFLERGYASTTLAPIYRKAISWQTSRPD ATWSTAAYSLESIDNSATKGGALGTRLTFAPEMGDARLRHLGVSLAHERYSHPGSGGASPLLIRPRPENDLANNSRITLA RFADGRDTDFDKWSLEYAEVVGPWSWQTEFSGGLLDDGAQHAKVLASYGLVSWFVTGESRGYDRKTGRFSRIKTPNRPSG AFELALRYDYMRGDQHLDGQPDFINASTQSWTLGGNWYFKPNLRVMLNVIDSRNRDRTMNAVVDHTLAVTGRFQYDF >Mature_397_residues MINDTLRLRAITACAAICLAPAAHAADDEGPVTAEVGGRVHWDFTVFDNDERGTPERNDTQFRRVWLDVAGKFYGFNYKA EAEFAGLQYEPGSRGILARDVYIAKKFSAGTLTVGQFKQYFSLDDRTGSNYGPFLERGYASTTLAPIYRKAISWQTSRPD ATWSTAAYSLESIDNSATKGGALGTRLTFAPEMGDARLRHLGVSLAHERYSHPGSGGASPLLIRPRPENDLANNSRITLA RFADGRDTDFDKWSLEYAEVVGPWSWQTEFSGGLLDDGAQHAKVLASYGLVSWFVTGESRGYDRKTGRFSRIKTPNRPSG AFELALRYDYMRGDQHLDGQPDFINASTQSWTLGGNWYFKPNLRVMLNVIDSRNRDRTMNAVVDHTLAVTGRFQYDF
Specific function: Anion specific, the binding site has higher affinity for phosphate than chloride ions. Porin O has a higher affinity for polyphosphates (tripolyphosphate and pyrophosphate) while porin P has a higher affinity for orthophosphate [H]
COG id: COG3746
COG function: function code P; Phosphate-selective porin
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oprO/oprP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010870 [H]
Pfam domain/function: PF07396 Porin_O_P [H]
EC number: NA
Molecular weight: Translated: 44270; Mature: 44270
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINDTLRLRAITACAAICLAPAAHAADDEGPVTAEVGGRVHWDFTVFDNDERGTPERNDT CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCCCCCH QFRRVWLDVAGKFYGFNYKAEAEFAGLQYEPGSRGILARDVYIAKKFSAGTLTVGQFKQY HHHHHHHHHHHHHCCCCEEECCEEECEEECCCCCCEEEEEEEEEEECCCCEEEHHHHHHH FSLDDRTGSNYGPFLERGYASTTLAPIYRKAISWQTSRPDATWSTAAYSLESIDNSATKG HCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCC GALGTRLTFAPEMGDARLRHLGVSLAHERYSHPGSGGASPLLIRPRPENDLANNSRITLA CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEEE RFADGRDTDFDKWSLEYAEVVGPWSWQTEFSGGLLDDGAQHAKVLASYGLVSWFVTGESR EECCCCCCCCCHHEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCC GYDRKTGRFSRIKTPNRPSGAFELALRYDYMRGDQHLDGQPDFINASTQSWTLGGNWYFK CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEECCCCEEEECCEEEEC PNLRVMLNVIDSRNRDRTMNAVVDHTLAVTGRFQYDF CCCEEEEEECCCCCCCHHHHHHHHEEEEEEEEEEECC >Mature Secondary Structure MINDTLRLRAITACAAICLAPAAHAADDEGPVTAEVGGRVHWDFTVFDNDERGTPERNDT CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCCCCCH QFRRVWLDVAGKFYGFNYKAEAEFAGLQYEPGSRGILARDVYIAKKFSAGTLTVGQFKQY HHHHHHHHHHHHHCCCCEEECCEEECEEECCCCCCEEEEEEEEEEECCCCEEEHHHHHHH FSLDDRTGSNYGPFLERGYASTTLAPIYRKAISWQTSRPDATWSTAAYSLESIDNSATKG HCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCC GALGTRLTFAPEMGDARLRHLGVSLAHERYSHPGSGGASPLLIRPRPENDLANNSRITLA CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEEE RFADGRDTDFDKWSLEYAEVVGPWSWQTEFSGGLLDDGAQHAKVLASYGLVSWFVTGESR EECCCCCCCCCHHEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCC GYDRKTGRFSRIKTPNRPSGAFELALRYDYMRGDQHLDGQPDFINASTQSWTLGGNWYFK CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEECCCCEEEECCEEEEC PNLRVMLNVIDSRNRDRTMNAVVDHTLAVTGRFQYDF CCCEEEEEECCCCCCCHHHHHHHHEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1406271; 10984043 [H]