BacMap

Definition	Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome.
Accession	NC_007086
Length	5,148,708

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The map label for this gene is fabG [H]

Identifier: 66767142

GI number: 66767142

Start: 968123

End: 968863

Strand: Reverse

Name: fabG [H]

Synonym: XC_0809

Alternate gene names: 66767142

Gene position: 968863-968123 (Counterclockwise)

Preceding gene: 66767143

Following gene: 66767141

Centisome position: 18.82

GC content: 64.91

Gene sequence:

>741_bases
ATGACGCTTCGCATCGCATACGTCACCAGTGGCATGGGCAGTGTGGGTACTGCGATCTGCCAGAAACTGGCGCGCACCGG
GCACACGGTGGTGGCCGGGTGTGGTCCTAATTCGCCGCGCAAATCGGCGTGGCTGCGTGAGCAACGCGAGCTCGGGTTCG
ACTTCGTTGCCTCCGAAGGCAACGCCGCCGATTGGGATTCCACCATGGCTGCGTTTGCCAAGGTCAAGGCGGAGGTCGGC
GAGATCGATGTGCTGGTCAACAACGCCGGTGGCAGCCGCGACACGCTGTTCCGCCAGATGAGCCGCGACGACTGGAATGC
GGTGATTGCCAGCAACCTGCATTCGCTGTTCAACATCACCAAGCAGGTGGTGGACGGCATGACCTCGCGCGGCTGGGGGC
GCATCGTCAACATTGGGTCGGTCAGCGCGCACAAGGGCCAGATCGGGCAGATCAACTTCGCCACCGCCAAGGCGGCCATG
CATGGGTTCAGCCGTGCGCTGGCGCAGGAAGTGGCCTCGCGCGGTGTCACCGTCAACACCATTTCGCCCGGCTATATCGC
CAGCGCTTCCATCAGCAATTTCCCACCGGATGTGCTGGACCGCCTGGCCACCTCGGTGCCGGTGCGCCGGCTCGGCAAGC
CGGCCGAAGTGGCCGGCCTGTGCGCATGGCTGGCCTCCGACGACGCCGCGTATGTGACCGGCGCGGACTATGCGGTCAAC
GGCGGTTTGTACATGGGCTAG

Upstream 100 bases:

>100_bases
TCGATTCCTGACTTCCACATAAAAAATAGAAACCGCGGCCCCTGCTCCACCGATTCCCCACTCCCGATTCCCCATTCCCA
ACTCCGAAGGAGTTCAAGCA

Downstream 100 bases:

>100_bases
TGCGCCATGCACGTGCTGCGCTGCTGCGTGGAGGCTGGCATCCATCACGCGCAGCGCAGCGATGCACCTGGCGACGCAGC
AGTGCGTATAGCCGCCCGTG

Product: 3-ketoacyl-(acyl-carrier-protein) reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTLRIAYVTSGMGSVGTAICQKLARTGHTVVAGCGPNSPRKSAWLREQRELGFDFVASEGNAADWDSTMAAFAKVKAEVG
EIDVLVNNAGGSRDTLFRQMSRDDWNAVIASNLHSLFNITKQVVDGMTSRGWGRIVNIGSVSAHKGQIGQINFATAKAAM
HGFSRALAQEVASRGVTVNTISPGYIASASISNFPPDVLDRLATSVPVRRLGKPAEVAGLCAWLASDDAAYVTGADYAVN
GGLYMG

Sequences:

>Translated_246_residues
MTLRIAYVTSGMGSVGTAICQKLARTGHTVVAGCGPNSPRKSAWLREQRELGFDFVASEGNAADWDSTMAAFAKVKAEVG
EIDVLVNNAGGSRDTLFRQMSRDDWNAVIASNLHSLFNITKQVVDGMTSRGWGRIVNIGSVSAHKGQIGQINFATAKAAM
HGFSRALAQEVASRGVTVNTISPGYIASASISNFPPDVLDRLATSVPVRRLGKPAEVAGLCAWLASDDAAYVTGADYAVN
GGLYMG
>Mature_245_residues
TLRIAYVTSGMGSVGTAICQKLARTGHTVVAGCGPNSPRKSAWLREQRELGFDFVASEGNAADWDSTMAAFAKVKAEVGE
IDVLVNNAGGSRDTLFRQMSRDDWNAVIASNLHSLFNITKQVVDGMTSRGWGRIVNIGSVSAHKGQIGQINFATAKAAMH
GFSRALAQEVASRGVTVNTISPGYIASASISNFPPDVLDRLATSVPVRRLGKPAEVAGLCAWLASDDAAYVTGADYAVNG
GLYMG

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=250, Percent_Identity=31.6, Blast_Score=131, Evalue=7e-31,
Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=28.9256198347107, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=30.241935483871, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=29.0836653386454, Blast_Score=92, Evalue=3e-19,
Organism=Homo sapiens, GI4758504, Length=254, Percent_Identity=27.9527559055118, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI10190704, Length=250, Percent_Identity=29.2, Blast_Score=87, Evalue=9e-18,
Organism=Homo sapiens, GI4504505, Length=252, Percent_Identity=28.968253968254, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI66933014, Length=172, Percent_Identity=29.0697674418605, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI19923817, Length=247, Percent_Identity=27.5303643724696, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=27.7551020408163, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI83715985, Length=254, Percent_Identity=25.9842519685039, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI59889578, Length=207, Percent_Identity=28.0193236714976, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI7705925, Length=186, Percent_Identity=23.6559139784946, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI7706318, Length=202, Percent_Identity=27.2277227722772, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=39.6761133603239, Blast_Score=177, Evalue=7e-46,
Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=35.4581673306773, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1789208, Length=246, Percent_Identity=30.0813008130081, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788459, Length=176, Percent_Identity=34.0909090909091, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=29.6, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1790717, Length=240, Percent_Identity=27.0833333333333, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI2367365, Length=246, Percent_Identity=30.4878048780488, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=27.5303643724696, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1786812, Length=215, Percent_Identity=26.9767441860465, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1787905, Length=242, Percent_Identity=29.3388429752066, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789378, Length=247, Percent_Identity=27.1255060728745, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1787820, Length=191, Percent_Identity=29.3193717277487, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1789057, Length=257, Percent_Identity=25.2918287937743, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=244, Percent_Identity=33.6065573770492, Blast_Score=130, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI25147288, Length=245, Percent_Identity=33.469387755102, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17560676, Length=256, Percent_Identity=28.90625, Blast_Score=94, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=247, Percent_Identity=29.5546558704453, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17538182, Length=254, Percent_Identity=29.9212598425197, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17568967, Length=242, Percent_Identity=28.9256198347107, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17559104, Length=269, Percent_Identity=28.2527881040892, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI115534694, Length=239, Percent_Identity=25.9414225941423, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17562904, Length=262, Percent_Identity=27.0992366412214, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=208, Percent_Identity=27.8846153846154, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=274, Percent_Identity=25.1824817518248, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17508651, Length=255, Percent_Identity=25.0980392156863, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=270, Percent_Identity=24.4444444444444, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=188, Percent_Identity=29.2553191489362, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=205, Percent_Identity=28.780487804878, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17561272, Length=179, Percent_Identity=28.4916201117318, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=24.5283018867925, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=25.6603773584906, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=181, Percent_Identity=29.8342541436464, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=267, Percent_Identity=26.2172284644195, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=204, Percent_Identity=27.4509803921569, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17536651, Length=179, Percent_Identity=27.9329608938547, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17560220, Length=270, Percent_Identity=23.3333333333333, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=26.0377358490566, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71994600, Length=199, Percent_Identity=26.1306532663317, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=167, Percent_Identity=27.5449101796407, Blast_Score=80, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6324126, Length=259, Percent_Identity=24.7104247104247, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24639444, Length=244, Percent_Identity=32.3770491803279, Blast_Score=114, Evalue=6e-26,
Organism=Drosophila melanogaster, GI23397609, Length=247, Percent_Identity=30.3643724696356, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=27.5590551181102, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21357041, Length=174, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI21355319, Length=248, Percent_Identity=25.4032258064516, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24643142, Length=244, Percent_Identity=25.4098360655738, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24644339, Length=195, Percent_Identity=28.2051282051282, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI28571526, Length=178, Percent_Identity=30.8988764044944, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI18859837, Length=241, Percent_Identity=29.4605809128631, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24644337, Length=169, Percent_Identity=29.585798816568, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011283
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.36 [H]

Molecular weight: Translated: 25913; Mature: 25781

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRIAYVTSGMGSVGTAICQKLARTGHTVVAGCGPNSPRKSAWLREQRELGFDFVASEG
CEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCC
NAADWDSTMAAFAKVKAEVGEIDVLVNNAGGSRDTLFRQMSRDDWNAVIASNLHSLFNIT
CCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KQVVDGMTSRGWGRIVNIGSVSAHKGQIGQINFATAKAAMHGFSRALAQEVASRGVTVNT
HHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEE
ISPGYIASASISNFPPDVLDRLATSVPVRRLGKPAEVAGLCAWLASDDAAYVTGADYAVN
CCCCCEEECCCCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCEEEECCCEEEC
GGLYMG
CCEECC
>Mature Secondary Structure 
TLRIAYVTSGMGSVGTAICQKLARTGHTVVAGCGPNSPRKSAWLREQRELGFDFVASEG
EEEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCC
NAADWDSTMAAFAKVKAEVGEIDVLVNNAGGSRDTLFRQMSRDDWNAVIASNLHSLFNIT
CCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KQVVDGMTSRGWGRIVNIGSVSAHKGQIGQINFATAKAAMHGFSRALAQEVASRGVTVNT
HHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEE
ISPGYIASASISNFPPDVLDRLATSVPVRRLGKPAEVAGLCAWLASDDAAYVTGADYAVN
CCCCCEEECCCCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCEEEECCCEEEC
GGLYMG
CCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2670935 [H]