| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66767108
Identifier: 66767108
GI number: 66767108
Start: 929516
End: 930697
Strand: Reverse
Name: 66767108
Synonym: XC_0772
Alternate gene names: NA
Gene position: 930697-929516 (Counterclockwise)
Preceding gene: 77761113
Following gene: 66767106
Centisome position: 18.08
GC content: 67.09
Gene sequence:
>1182_bases GTGACCCAAATGCGCATGCCCACCTCCCCGACCCGCCCTGCAACCGCCTGGCCGCTGTACGCGCTGCCCAGTCCGGGCGA AGCGATCCGCCAGTTCACACCAAACTGGTTCGCGGTGACGATGGGCACCGGCATCCTGTCGCTGGTGCTGGGCCAGCTCC CCTGGCCCGTGCCTGGCGCCGCGTTGCTCGGCGCTGGCCTGTGGCGCTGCAATGTCGGGTTGTTTGTGGTGTTCAGCGCG TTGTATCTCGCTCGCTGGGCGCTGTACCCGCACGAAGCCCGACGCATCCTGGCTCACCCGACCGCCTCGATGTTTCTGGG CACTATCCCGATGGGCCTGGCGACGCTCATCAACGGCCTGCTGCTCTATGGCCTGCCGCGCTGGGGCGCTGCCGTCATTC CCGTGGCGACTGCGTTGTGGTGGATGGACGCGGCCATGGCGCTGGCCTGCGGCGTGCTGGTGCCCTACCTGATGTTTACC CGCCAGCAGCACCGCATGGAACAGATGACCGCACTATGGCTACTGCCAGTGGTGGCTGCGGAAGTCGCCGCGGCCAGTGC TGGCGCGCTCGCCCCGCATCTGGCCGATGCCGGCAGCCGCTTCGGCATGCTGGTTGCCGGGTACGTGCTGTGGGCGTACT CGGTGCCGGTGGCGCTGGGCATCCTGGTGATCCTGTGGCTGCGCATGGCGCTACACCAGTTGCCGCAGGCCAGCATGGCC GCTTCGAGTTGGCTGGCGCTGGGGCCGATCGGCACTGGCGCGTTGGGCATGCTGGTATTTGCCGGCGACGCGCCGGCACT GTTCGCCGCACATGGCATGGGCACCATCGGCCAGGCCGCGGCGGGATGTGGCCTGATCGCCGGCCTGTTGCTGTGGGGGC TGGGGCTGTGGTGGCTGGCGCTGGCCATCCTCATCACGGCCCGCTATTTCGCAGACAAAGTGCCGTTCAATCTGGGCTGG TGGGGATTCACGTTCCCACTCGGGGTTTATGCGTTGGCGACATTGAAGCTCGGCGCCGCGCTGCAAATGCAGGTCTTCGA TGTAGTCGGCAGCGTATTGGTCCTGCTGCTATGCGTGACCTGGACGATCGTGGCGGCACGCACTGCGGCAGGGGCCTATC GCGGCACGCTGTTCGTTGCGCCCTGTCTTGTCGAATCCAGCGAGCATGCACCTGCACGCTGA
Upstream 100 bases:
>100_bases TTCATGGTTAGCGATTTATTGGGTTACATCAACCGATATTACGCGCTTTACTGCTAGATCCAGCTGCCTAGACTCACTCA CTTCTTCAGCCGACACCGCT
Downstream 100 bases:
>100_bases AGTACAGGTTGCATGTCTGACAGGTGCGCTTCGCGCTGCCGGATGAGCACGCATGCGCGTTCGGCTATTCCGCGGCGTCC AGATCCGGTAGTGGTGGCGG
Product: putative malic acid transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MTQMRMPTSPTRPATAWPLYALPSPGEAIRQFTPNWFAVTMGTGILSLVLGQLPWPVPGAALLGAGLWRCNVGLFVVFSA LYLARWALYPHEARRILAHPTASMFLGTIPMGLATLINGLLLYGLPRWGAAVIPVATALWWMDAAMALACGVLVPYLMFT RQQHRMEQMTALWLLPVVAAEVAAASAGALAPHLADAGSRFGMLVAGYVLWAYSVPVALGILVILWLRMALHQLPQASMA ASSWLALGPIGTGALGMLVFAGDAPALFAAHGMGTIGQAAAGCGLIAGLLLWGLGLWWLALAILITARYFADKVPFNLGW WGFTFPLGVYALATLKLGAALQMQVFDVVGSVLVLLLCVTWTIVAARTAAGAYRGTLFVAPCLVESSEHAPAR
Sequences:
>Translated_393_residues MTQMRMPTSPTRPATAWPLYALPSPGEAIRQFTPNWFAVTMGTGILSLVLGQLPWPVPGAALLGAGLWRCNVGLFVVFSA LYLARWALYPHEARRILAHPTASMFLGTIPMGLATLINGLLLYGLPRWGAAVIPVATALWWMDAAMALACGVLVPYLMFT RQQHRMEQMTALWLLPVVAAEVAAASAGALAPHLADAGSRFGMLVAGYVLWAYSVPVALGILVILWLRMALHQLPQASMA ASSWLALGPIGTGALGMLVFAGDAPALFAAHGMGTIGQAAAGCGLIAGLLLWGLGLWWLALAILITARYFADKVPFNLGW WGFTFPLGVYALATLKLGAALQMQVFDVVGSVLVLLLCVTWTIVAARTAAGAYRGTLFVAPCLVESSEHAPAR >Mature_392_residues TQMRMPTSPTRPATAWPLYALPSPGEAIRQFTPNWFAVTMGTGILSLVLGQLPWPVPGAALLGAGLWRCNVGLFVVFSAL YLARWALYPHEARRILAHPTASMFLGTIPMGLATLINGLLLYGLPRWGAAVIPVATALWWMDAAMALACGVLVPYLMFTR QQHRMEQMTALWLLPVVAAEVAAASAGALAPHLADAGSRFGMLVAGYVLWAYSVPVALGILVILWLRMALHQLPQASMAA SSWLALGPIGTGALGMLVFAGDAPALFAAHGMGTIGQAAAGCGLIAGLLLWGLGLWWLALAILITARYFADKVPFNLGWW GFTFPLGVYALATLKLGAALQMQVFDVVGSVLVLLLCVTWTIVAARTAAGAYRGTLFVAPCLVESSEHAPAR
Specific function: Unknown
COG id: COG1275
COG function: function code P; Tellurite resistance protein and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tellurite-resistance/dicarboxylate transporter (TDT) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325165, Length=407, Percent_Identity=21.3759213759214, Blast_Score=83, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004695 - InterPro: IPR011552 [H]
Pfam domain/function: PF03595 C4dic_mal_tran [H]
EC number: NA
Molecular weight: Translated: 41714; Mature: 41583
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQMRMPTSPTRPATAWPLYALPSPGEAIRQFTPNWFAVTMGTGILSLVLGQLPWPVPGA CCCCCCCCCCCCCCCCCCEEECCCCHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCCCH ALLGAGLWRCNVGLFVVFSALYLARWALYPHEARRILAHPTASMFLGTIPMGLATLINGL HHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LLYGLPRWGAAVIPVATALWWMDAAMALACGVLVPYLMFTRQQHRMEQMTALWLLPVVAA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVAAASAGALAPHLADAGSRFGMLVAGYVLWAYSVPVALGILVILWLRMALHQLPQASMA HHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ASSWLALGPIGTGALGMLVFAGDAPALFAAHGMGTIGQAAAGCGLIAGLLLWGLGLWWLA HHCCCEECCCCCCHHHHEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LAILITARYFADKVPFNLGWWGFTFPLGVYALATLKLGAALQMQVFDVVGSVLVLLLCVT HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WTIVAARTAAGAYRGTLFVAPCLVESSEHAPAR HHHHHHHHHHHHHCCHHEEEHHHHCCCCCCCCC >Mature Secondary Structure TQMRMPTSPTRPATAWPLYALPSPGEAIRQFTPNWFAVTMGTGILSLVLGQLPWPVPGA CCCCCCCCCCCCCCCCCEEECCCCHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCCCH ALLGAGLWRCNVGLFVVFSALYLARWALYPHEARRILAHPTASMFLGTIPMGLATLINGL HHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LLYGLPRWGAAVIPVATALWWMDAAMALACGVLVPYLMFTRQQHRMEQMTALWLLPVVAA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVAAASAGALAPHLADAGSRFGMLVAGYVLWAYSVPVALGILVILWLRMALHQLPQASMA HHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ASSWLALGPIGTGALGMLVFAGDAPALFAAHGMGTIGQAAAGCGLIAGLLLWGLGLWWLA HHCCCEECCCCCCHHHHEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LAILITARYFADKVPFNLGWWGFTFPLGVYALATLKLGAALQMQVFDVVGSVLVLLLCVT HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WTIVAARTAAGAYRGTLFVAPCLVESSEHAPAR HHHHHHHHHHHHHCCHHEEEHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]