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The map label for this gene is yoaJ [H]

Identifier: 66766963

GI number: 66766963

Start: 741701

End: 743473

Strand: Reverse

Name: yoaJ [H]

Synonym: XC_0625

Alternate gene names: 66766963

Gene position: 743473-741701 (Counterclockwise)

Preceding gene: 66766964

Following gene: 66766961

Centisome position: 14.44

GC content: 63.79

Gene sequence:

>1773_bases
ATGCCATCACATATCCATTTCTTGATCGCGCTCGCAACGCTCATCCCGGTCACCGCGCCGGCGATGCAGGTCAGTACGCA
AGCTCCCCTTGTCGATGCAACAGGTCAGACGCTGCACATTCGCGGGGTCACCTGGCCCGGCTTCGATCGCGCCGGGTTGG
CGGCCGTCGGCATGCGCAACAACACACTGGCGCAACTGCTGGATCGGATGCAGGCGTCAGACATCAATGCCGTACGTGTG
CCGGTCTGCGCCGCTGTTCTGCAACGCGCCCCTGTGGCAGCTGCAGAAGTTGCCGGCGATTCCACGCTGCGCGGATTAGA
TTCCTTGCAACTGCTCGACGCAGTGGTGCATGCCGCAAGCCAGCGCGGGATGCAGGTGATGTTCGCGTTTGCAGATGGAG
GCTGCGATGACCGCGCACCGCTCCTGGGCGCACAGCAGCAAGCATGGACGCGCGGCCTGGTTACGCTGGCACGCCGCTAT
GGCGGCAACGCCAATGTCCTGGGCATTGACCTTGGCAGCAGCGGCTATCGCAATGCCAGCTGGGCAGGAAACGCGGCGGA
TCAGGATTGGAACCGGGTAGCGTCGCGCGCAGTTGCAAGGGTGCTGGCGCAGGCACCGCGCTGGGTCGTCGGTGTGGAAG
GTGTGGGCAGCAATGCGGTGTGCAGTGACCCAGAGCGCAAGGCGCCTGGCAGCAATCTTCAGCCGTTCGCGTGCGTGCCG
CTGGACATCGCTCGCCGACACTTGGTGTTGATGCCGAAGTTGGCGGGCCCGGATCGCGATACGACCGATGCTTTCGCCGC
ACCCGGATTTGCGCAGGCACTGCCCGCCATGTGGCAACGCGACTTCGGCCAATTCGCAATCGACCATGCAGTGGTACCCG
TCAGCCTCGGCGGTGGACTGGGCGATGGCGACCCGCGTGACCCGGCATGGCAAACCGCATTGAGCGGTTATTTGGCAAAC
GCAGGAATACGCAGCGCATTTCTCGGCAGTTGGGAAACGGGCAATGCCAACAACGGCGGCCTGTTGGCGCCGGATGGCAG
CCCCCGCGCAGACAAACTGCTGATCTTGCGTCATGCCTGGGGCAGGTTACCCGTGATGCCCGCCATTGCGACAGCAACCG
GCGACAGCACGAAGAATGCGAGTGGGAAGAAGCCGTGGAATAGTACTTTCACCGGCACCGCCACCGTGACCGGCTCCGGC
TACTCTGGCGGCGCGCTCCTGCTGGACCCCATTCCGAGTGATGCCTTCATCACCGCGCTCAACCCGGTGCAACTGAACTT
CGGTGGCGTCAAGGCCGCGCTTGCCGGCGCGTACCTGCAGGTGAACGGCCCCAAGGGCACCACCACGGTCTACGTGACCG
ACCTGTATCCGGAGGGCGCATCCGGCGGCCTGGATCTATCGCACAACGCGTTCGCGGCGATCGGCGACATGGTGCAGGGG
CGCATCCCGATCAGCTGGAAAGTGGTACGCGCGCCGGTCACCGGCAACCTGCAATACCGCATCAAGGAAGGCAGCTCACG
CTGGTGGGCGGCGATCCAGGTGCGCAACCACGCCTATCCGGTGGTGAAGCTGGAGGTGAAGCAAGGCAGCACCTGGAAGA
ACCTGCAGAAGATGGACTACAACCACTTCCTGGGCGAGCAACTGGGCAACCAACCGCTAACCCTGCGCATCACCGACATT
CGCGGCAAGGTCCTCACCGATACCTTGCCACGTCTGCCAGAAGACGGCAGCAAGCCGGCGTATTTCGAACCGGGGCATGT
GCAGTTTCCGTAG

Upstream 100 bases:

>100_bases
GACTGCATCGCGCGCGTTGCCGGGGAGCTGCGCCCTTTTGTCTCCACCCGCACAGGCCGCTTCGCACGCAACCGTACATA
ACACACTCCAGAAGACGTCC

Downstream 100 bases:

>100_bases
CGCGAACAGGTGGTTTGCCTGAACTGAGCGTTGGATTGGTTAACGGGCGTGGACTTGTTTAGATCGTTTGCTTGTCTAGA
GCGACAAGCGCTTTCAGCGC

Product: cellulase

Products: NA

Alternate protein names: EXLX1 [H]

Number of amino acids: Translated: 590; Mature: 589

Protein sequence:

>590_residues
MPSHIHFLIALATLIPVTAPAMQVSTQAPLVDATGQTLHIRGVTWPGFDRAGLAAVGMRNNTLAQLLDRMQASDINAVRV
PVCAAVLQRAPVAAAEVAGDSTLRGLDSLQLLDAVVHAASQRGMQVMFAFADGGCDDRAPLLGAQQQAWTRGLVTLARRY
GGNANVLGIDLGSSGYRNASWAGNAADQDWNRVASRAVARVLAQAPRWVVGVEGVGSNAVCSDPERKAPGSNLQPFACVP
LDIARRHLVLMPKLAGPDRDTTDAFAAPGFAQALPAMWQRDFGQFAIDHAVVPVSLGGGLGDGDPRDPAWQTALSGYLAN
AGIRSAFLGSWETGNANNGGLLAPDGSPRADKLLILRHAWGRLPVMPAIATATGDSTKNASGKKPWNSTFTGTATVTGSG
YSGGALLLDPIPSDAFITALNPVQLNFGGVKAALAGAYLQVNGPKGTTTVYVTDLYPEGASGGLDLSHNAFAAIGDMVQG
RIPISWKVVRAPVTGNLQYRIKEGSSRWWAAIQVRNHAYPVVKLEVKQGSTWKNLQKMDYNHFLGEQLGNQPLTLRITDI
RGKVLTDTLPRLPEDGSKPAYFEPGHVQFP

Sequences:

>Translated_590_residues
MPSHIHFLIALATLIPVTAPAMQVSTQAPLVDATGQTLHIRGVTWPGFDRAGLAAVGMRNNTLAQLLDRMQASDINAVRV
PVCAAVLQRAPVAAAEVAGDSTLRGLDSLQLLDAVVHAASQRGMQVMFAFADGGCDDRAPLLGAQQQAWTRGLVTLARRY
GGNANVLGIDLGSSGYRNASWAGNAADQDWNRVASRAVARVLAQAPRWVVGVEGVGSNAVCSDPERKAPGSNLQPFACVP
LDIARRHLVLMPKLAGPDRDTTDAFAAPGFAQALPAMWQRDFGQFAIDHAVVPVSLGGGLGDGDPRDPAWQTALSGYLAN
AGIRSAFLGSWETGNANNGGLLAPDGSPRADKLLILRHAWGRLPVMPAIATATGDSTKNASGKKPWNSTFTGTATVTGSG
YSGGALLLDPIPSDAFITALNPVQLNFGGVKAALAGAYLQVNGPKGTTTVYVTDLYPEGASGGLDLSHNAFAAIGDMVQG
RIPISWKVVRAPVTGNLQYRIKEGSSRWWAAIQVRNHAYPVVKLEVKQGSTWKNLQKMDYNHFLGEQLGNQPLTLRITDI
RGKVLTDTLPRLPEDGSKPAYFEPGHVQFP
>Mature_589_residues
PSHIHFLIALATLIPVTAPAMQVSTQAPLVDATGQTLHIRGVTWPGFDRAGLAAVGMRNNTLAQLLDRMQASDINAVRVP
VCAAVLQRAPVAAAEVAGDSTLRGLDSLQLLDAVVHAASQRGMQVMFAFADGGCDDRAPLLGAQQQAWTRGLVTLARRYG
GNANVLGIDLGSSGYRNASWAGNAADQDWNRVASRAVARVLAQAPRWVVGVEGVGSNAVCSDPERKAPGSNLQPFACVPL
DIARRHLVLMPKLAGPDRDTTDAFAAPGFAQALPAMWQRDFGQFAIDHAVVPVSLGGGLGDGDPRDPAWQTALSGYLANA
GIRSAFLGSWETGNANNGGLLAPDGSPRADKLLILRHAWGRLPVMPAIATATGDSTKNASGKKPWNSTFTGTATVTGSGY
SGGALLLDPIPSDAFITALNPVQLNFGGVKAALAGAYLQVNGPKGTTTVYVTDLYPEGASGGLDLSHNAFAAIGDMVQGR
IPISWKVVRAPVTGNLQYRIKEGSSRWWAAIQVRNHAYPVVKLEVKQGSTWKNLQKMDYNHFLGEQLGNQPLTLRITDIR
GKVLTDTLPRLPEDGSKPAYFEPGHVQFP

Specific function: May promote colonization of plant roots. May cause loosening and extension of plant cell walls by disrupting non- covalent bonding between cellulose microfibrils and matrix glucans. Has very low expansin activity (in vitro). No enzymatic activity has been

COG id: COG4305

COG function: function code G; Endoglucanase C-terminal domain/subunit and related proteins

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 expansin-like EG45 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR007117 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 62367; Mature: 62235

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS00879 ODR_DC_2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSHIHFLIALATLIPVTAPAMQVSTQAPLVDATGQTLHIRGVTWPGFDRAGLAAVGMRN
CCCHHHHHHHHHHHHHCCCCCCEECCCCCEEECCCCEEEEEECCCCCCCCCCEEEECCCC
NTLAQLLDRMQASDINAVRVPVCAAVLQRAPVAAAEVAGDSTLRGLDSLQLLDAVVHAAS
CHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
QRGMQVMFAFADGGCDDRAPLLGAQQQAWTRGLVTLARRYGGNANVLGIDLGSSGYRNAS
CCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
WAGNAADQDWNRVASRAVARVLAQAPRWVVGVEGVGSNAVCSDPERKAPGSNLQPFACVP
CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHCCCCCCCCCEEECC
LDIARRHLVLMPKLAGPDRDTTDAFAAPGFAQALPAMWQRDFGQFAIDHAVVPVSLGGGL
HHHHCCEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
GDGDPRDPAWQTALSGYLANAGIRSAFLGSWETGNANNGGLLAPDGSPRADKLLILRHAW
CCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEEEECC
GRLPVMPAIATATGDSTKNASGKKPWNSTFTGTATVTGSGYSGGALLLDPIPSDAFITAL
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEE
NPVQLNFGGVKAALAGAYLQVNGPKGTTTVYVTDLYPEGASGGLDLSHNAFAAIGDMVQG
CCEEEECCCHHHHHCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCC
RIPISWKVVRAPVTGNLQYRIKEGSSRWWAAIQVRNHAYPVVKLEVKQGSTWKNLQKMDY
CCCEEEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEEECCCCCHHHHHHHCH
NHFLGEQLGNQPLTLRITDIRGKVLTDTLPRLPEDGSKPAYFEPGHVQFP
HHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCEECCCCCCCC
>Mature Secondary Structure 
PSHIHFLIALATLIPVTAPAMQVSTQAPLVDATGQTLHIRGVTWPGFDRAGLAAVGMRN
CCHHHHHHHHHHHHHCCCCCCEECCCCCEEECCCCEEEEEECCCCCCCCCCEEEECCCC
NTLAQLLDRMQASDINAVRVPVCAAVLQRAPVAAAEVAGDSTLRGLDSLQLLDAVVHAAS
CHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
QRGMQVMFAFADGGCDDRAPLLGAQQQAWTRGLVTLARRYGGNANVLGIDLGSSGYRNAS
CCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
WAGNAADQDWNRVASRAVARVLAQAPRWVVGVEGVGSNAVCSDPERKAPGSNLQPFACVP
CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHCCCCCCCCCEEECC
LDIARRHLVLMPKLAGPDRDTTDAFAAPGFAQALPAMWQRDFGQFAIDHAVVPVSLGGGL
HHHHCCEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
GDGDPRDPAWQTALSGYLANAGIRSAFLGSWETGNANNGGLLAPDGSPRADKLLILRHAW
CCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEEEECC
GRLPVMPAIATATGDSTKNASGKKPWNSTFTGTATVTGSGYSGGALLLDPIPSDAFITAL
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEE
NPVQLNFGGVKAALAGAYLQVNGPKGTTTVYVTDLYPEGASGGLDLSHNAFAAIGDMVQG
CCEEEECCCHHHHHCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCC
RIPISWKVVRAPVTGNLQYRIKEGSSRWWAAIQVRNHAYPVVKLEVKQGSTWKNLQKMDY
CCCEEEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEEECCCCCHHHHHHHCH
NHFLGEQLGNQPLTLRITDIRGKVLTDTLPRLPEDGSKPAYFEPGHVQFP
HHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]