| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66766959
Identifier: 66766959
GI number: 66766959
Start: 737789
End: 738670
Strand: Reverse
Name: 66766959
Synonym: XC_0621
Alternate gene names: NA
Gene position: 738670-737789 (Counterclockwise)
Preceding gene: 66766961
Following gene: 66766957
Centisome position: 14.35
GC content: 69.27
Gene sequence:
>882_bases GTGTGGCGCGGCCCGGTGCAGACCGCCATCGTGCCCCATTACTCCGGCCCCCTGCTGACCCGCTCCGACGCCCTCGCCCT GCTTGCCGCGCGCGATAAGGGGCTCCCACGCTGGACCGGCTCGCTGGACCTGGGCCGCACCACGGCCACCGCCGAGCTCG ATGCGCAGACCTGGCAGTGGCGGGGCAAGGGCTACCCGTATCCGGGCAAGCTCAAGGACCGCACGCTGTATTTCTGGGAT GGCGACGACTTCGAACCCATCTCGCGCTTTGGCAGCAGCTTGATCAAGCTGGTGCCCACCGACTGGGGCCCGCCCACCTT CGAGATCGATGGCATCAAGATGCTGCCCTCCGCGCAGCTCTCGCCGTTCGAGGATGCGCAACGCAAGGTGGCGCTGGTGG AACCGCGCGGCAAGACCGTGCTCGACACCTGCGGCGGCCTCGGCTACTTCGCGGCCTGCTGCCTGGAGGCCGGCGTCGCG CAGCTGCAGTCGTTCGAAAAGAACGCCGACGTGCTGTGGCTGCGCACGCTCAACCCCTGGTCGCCGGATCCGGACGCGGC AGCAGCGGCCGGCCGCCTGCACCTCACCCATGGCGATGTGGCGCAGCACATCACCACGCTGGCCGATGCAGCATTCGATG CCATCCTGCACGACCCGCCACGCTTCGGCATTGCCGGGGAGCTGTATTCGCAGGTGTTCTACGACCAGCTGGCGCGCGTG CTGCGTCCGGGCGGGCGCCTGTTCCATTACACCGGCGCGCCCAACAGGCTCACCAGCGGCCGCGACGTGCCCAACGAAGT GAGCAAGCGGCTGAGCAAGGCCGGGTTTCGCACCCAGCTGGCGCTCGATGGCGTGCTGGCGGTGCTGCCGCCACGTCGGT GA
Upstream 100 bases:
>100_bases TACGCCAGCACAACGGCCTCCAACACGTACGCATTGCCCCGATGCCGCGGCGCAATGGCTCAGGTACGATGCCGGTCCCT CCCCTTCAGCCTGGTCGTGC
Downstream 100 bases:
>100_bases TGCGCGTCTGAGGCAATCAGCGTCAACCTCGCAGCACGATGACGACCAGCAGCATCACGCCGGGAATGACGCTGAGCACC GCACCGGCCCATGCGAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MWRGPVQTAIVPHYSGPLLTRSDALALLAARDKGLPRWTGSLDLGRTTATAELDAQTWQWRGKGYPYPGKLKDRTLYFWD GDDFEPISRFGSSLIKLVPTDWGPPTFEIDGIKMLPSAQLSPFEDAQRKVALVEPRGKTVLDTCGGLGYFAACCLEAGVA QLQSFEKNADVLWLRTLNPWSPDPDAAAAAGRLHLTHGDVAQHITTLADAAFDAILHDPPRFGIAGELYSQVFYDQLARV LRPGGRLFHYTGAPNRLTSGRDVPNEVSKRLSKAGFRTQLALDGVLAVLPPRR
Sequences:
>Translated_293_residues MWRGPVQTAIVPHYSGPLLTRSDALALLAARDKGLPRWTGSLDLGRTTATAELDAQTWQWRGKGYPYPGKLKDRTLYFWD GDDFEPISRFGSSLIKLVPTDWGPPTFEIDGIKMLPSAQLSPFEDAQRKVALVEPRGKTVLDTCGGLGYFAACCLEAGVA QLQSFEKNADVLWLRTLNPWSPDPDAAAAAGRLHLTHGDVAQHITTLADAAFDAILHDPPRFGIAGELYSQVFYDQLARV LRPGGRLFHYTGAPNRLTSGRDVPNEVSKRLSKAGFRTQLALDGVLAVLPPRR >Mature_293_residues MWRGPVQTAIVPHYSGPLLTRSDALALLAARDKGLPRWTGSLDLGRTTATAELDAQTWQWRGKGYPYPGKLKDRTLYFWD GDDFEPISRFGSSLIKLVPTDWGPPTFEIDGIKMLPSAQLSPFEDAQRKVALVEPRGKTVLDTCGGLGYFAACCLEAGVA QLQSFEKNADVLWLRTLNPWSPDPDAAAAAGRLHLTHGDVAQHITTLADAAFDAILHDPPRFGIAGELYSQVFYDQLARV LRPGGRLFHYTGAPNRLTSGRDVPNEVSKRLSKAGFRTQLALDGVLAVLPPRR
Specific function: Unknown
COG id: COG2521
COG function: function code R; Predicted archaeal methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 32148; Mature: 32148
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRGPVQTAIVPHYSGPLLTRSDALALLAARDKGLPRWTGSLDLGRTTATAELDAQTWQW CCCCCCCEEEECCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEE RGKGYPYPGKLKDRTLYFWDGDDFEPISRFGSSLIKLVPTDWGPPTFEIDGIKMLPSAQL CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHEEEECCCCCCCEEEECCEEECCCCCC SPFEDAQRKVALVEPRGKTVLDTCGGLGYFAACCLEAGVAQLQSFEKNADVLWLRTLNPW CCHHHHCCEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC SPDPDAAAAAGRLHLTHGDVAQHITTLADAAFDAILHDPPRFGIAGELYSQVFYDQLARV CCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LRPGGRLFHYTGAPNRLTSGRDVPNEVSKRLSKAGFRTQLALDGVLAVLPPRR HCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCEECCCCC >Mature Secondary Structure MWRGPVQTAIVPHYSGPLLTRSDALALLAARDKGLPRWTGSLDLGRTTATAELDAQTWQW CCCCCCCEEEECCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEE RGKGYPYPGKLKDRTLYFWDGDDFEPISRFGSSLIKLVPTDWGPPTFEIDGIKMLPSAQL CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHEEEECCCCCCCEEEECCEEECCCCCC SPFEDAQRKVALVEPRGKTVLDTCGGLGYFAACCLEAGVAQLQSFEKNADVLWLRTLNPW CCHHHHCCEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC SPDPDAAAAAGRLHLTHGDVAQHITTLADAAFDAILHDPPRFGIAGELYSQVFYDQLARV CCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LRPGGRLFHYTGAPNRLTSGRDVPNEVSKRLSKAGFRTQLALDGVLAVLPPRR HCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]