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The map label for this gene is 66766934

Identifier: 66766934

GI number: 66766934

Start: 711438

End: 713024

Strand: Reverse

Name: 66766934

Synonym: XC_0595

Alternate gene names: NA

Gene position: 713024-711438 (Counterclockwise)

Preceding gene: 66766938

Following gene: 66766930

Centisome position: 13.85

GC content: 66.92

Gene sequence:

>1587_bases
TTGAATACCACTGCCCCGCCCCTGCCCGCCGACGACCTGCCGCTCACCGACCGCCTGCGCGCCGCGCTGGATGTGCTGGA
GGCCATCGACGCGGACCGCAGCGTGCTCGATACGCTCTCCGAGGCCGACCGCGTGCGGCTGCATCAGGTGGTGGCCAAGG
TCTACCACCCCGAGCCCAAGGCGCGCCGCCAACTGCTCAAGCAGCGCGAGCGCGAACGCCATCAGGAAAAGGTCCGCAAG
GCCGAGGCCTTGCTCGAGCAGACCGGCATCCGCGCGTTGCGGCGCAAACCGGTGTTCAGCACGCCGAACTATTTCCCGCC
GCACGCCGCCGGCCTGCACGATGCACACAATGGCGAAGGCGCTGCCGCTGCCGAGGCGCCACAGCAATCGCCGGAACTGC
GGCACTGCTATGTGTGCAAGCAGAAGTTTACTCAGCTGCATCACTTCTACGACCAGATGTGCCCGGCCTGCGCGGAGCTG
AATTTCTTCAAGCGCACCGAAACCGCCGACCTGCGCGGGCGCGTGGCGCTGCTCACCGGCGGCCGGGTCAAGATTGGGTA
TCAGGCTGGCTTGAAGCTGCTGCGCGCCGGCGCCGAACTCATCGTCACCACGCGCTTCCCGCGCGACTCGGCCGCGCGTT
ATGCGGAAGAACCCGACTTTGCCGAGTGGGGCCACCGCCTGCAGGTGTTCGGGCTGGATCTGCGCCACACGCCCAGCGTG
GAAGCGTTCTGCAGCCAGTTGCTGGCCACGCGCACGCGGCTGGATTTCATCATCAACAACGCCTGCCAGACCGTGCGCCG
CCCGCCGCAGTTCTACGCGCACATGATGGCCGGCGAGACCGCCGCGCTGCACGACCTGCCCGAGACGGTGCGCAAGCTGG
TGGGCCATTACGAAGGCCTGCGTACACCCGAACTGCTGCGCGACGCCTCAGCCACTGCGCTGCCGGCCGTGCACGGACGC
GGCCTGGACGGCGCCGACGGCCTCACCCGCGCCGCCGAGCTGTCGCAGGTCGCGCTGCTGGACGACGAGCTGGTCGGCCA
GGAGCACCTGTTCCCCGAAGGCCGTCTCGATCAGGATCTGCAGCAGGTCGACTTGCGCGGCCGCAACTCCTGGCGCCTGC
TGCTGGCCGAGGTGCCCTCGGTGGAATTGCTGGAGACGCAACTGGTCAATGCCATCGCGCCTTTCATCATCAATGCGCGC
CTCAAGCCGCTGATGCTGCGCACGCCCGAGCGCGACAAGCACATCGTCAACGTCTCGGCGATGGAGGGCCAGTTCTACCG
CAACTTCAAGACCACCCGTCACCCGCACACCAACATGGCCAAGGCCGCGTTGAACATGATGACGCGCACCTCGGCGGCCG
ATTATCAAAACGACGGCATCCACATGAACAGCGTCGACACCGGCTGGGTCACCGACGAAGATCCGGCCGACATCGCCGCG
CTCAAGGTCCAGCAGGAACGCTTCCATCCGCCGCTGGACATCGTCGACGGCGCCGCGCGCATCGTCGACCCGATCATCCA
CGGCTTCAACACCGGCGAGCATGTGTGGGGGCAGTTCTTGAAGGACTATGCGCCGACGGATTGGTGA

Upstream 100 bases:

>100_bases
ACTGGCAACGCCCGCGTTTTCTAAGGGCTCAGCACCGTCTTGCCCACCGGCCGCCTGCCGCCACACCCACGGCTTTCAGC
CGCTTCTGCCCGGATCTGCC

Downstream 100 bases:

>100_bases
GGCCGGTCAGTAGCGGAGCGCATCGGCCGGCGCTGCCAGCGGTGCAGAACGGACGCTGTTGAATCATGCAGCAGGCGAAC
TACGTGTTCGCCGCGCCGGG

Product: oxidoreductase

Products: NA

Alternate protein names: Short Chain Dehydrogenase; Dehydrogenase; Short Chain Dehydrogenase/Reductase Family Oxidoreductase; Short-Chain Dehydrogenase; Oxidoreductase Short Chain Dehydrogenase/Reductase Family; Short-Chain Alcohol Dehydrogenase Like Protein; Short-Chain Dehydrogenases/Reductases Family Protein; Short-Chain Dehydrogenase/Reductase SDR

Number of amino acids: Translated: 528; Mature: 528

Protein sequence:

>528_residues
MNTTAPPLPADDLPLTDRLRAALDVLEAIDADRSVLDTLSEADRVRLHQVVAKVYHPEPKARRQLLKQRERERHQEKVRK
AEALLEQTGIRALRRKPVFSTPNYFPPHAAGLHDAHNGEGAAAAEAPQQSPELRHCYVCKQKFTQLHHFYDQMCPACAEL
NFFKRTETADLRGRVALLTGGRVKIGYQAGLKLLRAGAELIVTTRFPRDSAARYAEEPDFAEWGHRLQVFGLDLRHTPSV
EAFCSQLLATRTRLDFIINNACQTVRRPPQFYAHMMAGETAALHDLPETVRKLVGHYEGLRTPELLRDASATALPAVHGR
GLDGADGLTRAAELSQVALLDDELVGQEHLFPEGRLDQDLQQVDLRGRNSWRLLLAEVPSVELLETQLVNAIAPFIINAR
LKPLMLRTPERDKHIVNVSAMEGQFYRNFKTTRHPHTNMAKAALNMMTRTSAADYQNDGIHMNSVDTGWVTDEDPADIAA
LKVQQERFHPPLDIVDGAARIVDPIIHGFNTGEHVWGQFLKDYAPTDW

Sequences:

>Translated_528_residues
MNTTAPPLPADDLPLTDRLRAALDVLEAIDADRSVLDTLSEADRVRLHQVVAKVYHPEPKARRQLLKQRERERHQEKVRK
AEALLEQTGIRALRRKPVFSTPNYFPPHAAGLHDAHNGEGAAAAEAPQQSPELRHCYVCKQKFTQLHHFYDQMCPACAEL
NFFKRTETADLRGRVALLTGGRVKIGYQAGLKLLRAGAELIVTTRFPRDSAARYAEEPDFAEWGHRLQVFGLDLRHTPSV
EAFCSQLLATRTRLDFIINNACQTVRRPPQFYAHMMAGETAALHDLPETVRKLVGHYEGLRTPELLRDASATALPAVHGR
GLDGADGLTRAAELSQVALLDDELVGQEHLFPEGRLDQDLQQVDLRGRNSWRLLLAEVPSVELLETQLVNAIAPFIINAR
LKPLMLRTPERDKHIVNVSAMEGQFYRNFKTTRHPHTNMAKAALNMMTRTSAADYQNDGIHMNSVDTGWVTDEDPADIAA
LKVQQERFHPPLDIVDGAARIVDPIIHGFNTGEHVWGQFLKDYAPTDW
>Mature_528_residues
MNTTAPPLPADDLPLTDRLRAALDVLEAIDADRSVLDTLSEADRVRLHQVVAKVYHPEPKARRQLLKQRERERHQEKVRK
AEALLEQTGIRALRRKPVFSTPNYFPPHAAGLHDAHNGEGAAAAEAPQQSPELRHCYVCKQKFTQLHHFYDQMCPACAEL
NFFKRTETADLRGRVALLTGGRVKIGYQAGLKLLRAGAELIVTTRFPRDSAARYAEEPDFAEWGHRLQVFGLDLRHTPSV
EAFCSQLLATRTRLDFIINNACQTVRRPPQFYAHMMAGETAALHDLPETVRKLVGHYEGLRTPELLRDASATALPAVHGR
GLDGADGLTRAAELSQVALLDDELVGQEHLFPEGRLDQDLQQVDLRGRNSWRLLLAEVPSVELLETQLVNAIAPFIINAR
LKPLMLRTPERDKHIVNVSAMEGQFYRNFKTTRHPHTNMAKAALNMMTRTSAADYQNDGIHMNSVDTGWVTDEDPADIAA
LKVQQERFHPPLDIVDGAARIVDPIIHGFNTGEHVWGQFLKDYAPTDW

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59317; Mature: 59317

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTAPPLPADDLPLTDRLRAALDVLEAIDADRSVLDTLSEADRVRLHQVVAKVYHPEPK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ARRQLLKQRERERHQEKVRKAEALLEQTGIRALRRKPVFSTPNYFPPHAAGLHDAHNGEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
AAAAEAPQQSPELRHCYVCKQKFTQLHHFYDQMCPACAELNFFKRTETADLRGRVALLTG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCHHHHCCCCCCCCCCEEEEEC
GRVKIGYQAGLKLLRAGAELIVTTRFPRDSAARYAEEPDFAEWGHRLQVFGLDLRHTPSV
CEEEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCHHHHCCEEEEEEECCCCCCCH
EAFCSQLLATRTRLDFIINNACQTVRRPPQFYAHMMAGETAALHDLPETVRKLVGHYEGL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
RTPELLRDASATALPAVHGRGLDGADGLTRAAELSQVALLDDELVGQEHLFPEGRLDQDL
CCHHHHHHCCCHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHH
QQVDLRGRNSWRLLLAEVPSVELLETQLVNAIAPFIINARLKPLMLRTPERDKHIVNVSA
HHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEEEH
MEGQFYRNFKTTRHPHTNMAKAALNMMTRTSAADYQNDGIHMNSVDTGWVTDEDPADIAA
HCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHH
LKVQQERFHPPLDIVDGAARIVDPIIHGFNTGEHVWGQFLKDYAPTDW
HEEHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNTTAPPLPADDLPLTDRLRAALDVLEAIDADRSVLDTLSEADRVRLHQVVAKVYHPEPK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ARRQLLKQRERERHQEKVRKAEALLEQTGIRALRRKPVFSTPNYFPPHAAGLHDAHNGEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
AAAAEAPQQSPELRHCYVCKQKFTQLHHFYDQMCPACAELNFFKRTETADLRGRVALLTG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCHHHHCCCCCCCCCCEEEEEC
GRVKIGYQAGLKLLRAGAELIVTTRFPRDSAARYAEEPDFAEWGHRLQVFGLDLRHTPSV
CEEEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCHHHHCCEEEEEEECCCCCCCH
EAFCSQLLATRTRLDFIINNACQTVRRPPQFYAHMMAGETAALHDLPETVRKLVGHYEGL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
RTPELLRDASATALPAVHGRGLDGADGLTRAAELSQVALLDDELVGQEHLFPEGRLDQDL
CCHHHHHHCCCHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHH
QQVDLRGRNSWRLLLAEVPSVELLETQLVNAIAPFIINARLKPLMLRTPERDKHIVNVSA
HHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEEEH
MEGQFYRNFKTTRHPHTNMAKAALNMMTRTSAADYQNDGIHMNSVDTGWVTDEDPADIAA
HCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHH
LKVQQERFHPPLDIVDGAARIVDPIIHGFNTGEHVWGQFLKDYAPTDW
HEEHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA