Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
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Accession | NC_007086 |
Length | 5,148,708 |
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The map label for this gene is cbbZ [H]
Identifier: 66766920
GI number: 66766920
Start: 694436
End: 695059
Strand: Reverse
Name: cbbZ [H]
Synonym: XC_0581
Alternate gene names: 66766920
Gene position: 695059-694436 (Counterclockwise)
Preceding gene: 66766921
Following gene: 66766910
Centisome position: 13.5
GC content: 65.38
Gene sequence:
>624_bases ATGCCTGCACTGATCATTTTCGATTTCGACGGCACGTTGGCCGATTCGTTCGGTTTTTTCCTGAGCACCCAGCGCACCCT GGCCGCCCGTCACGGCTTCCGCGCCGCCGAAGCGCATGAAGTGGATGCCGCGCGCCGGCTGACCACCCGCGAATTACTCA AACACTCAGGCCTACGCAGCTGGCGTGTGCCGCTGGTGGCCGCCGACTTCATCCGCCTGATGCGCGCTGCACCGCCGCCC GCACTGTTCCCGGGCGTGGACGCGGCACTGCGCGCGCTCCACGCCAGCGGCACACGGCTGGCCCTGGTGTCGTCCAACTC TGTGGATAACGTGCAACGCGCCCTCGGCGCGGAACTAAGCGCCCTGTTCGCCGTCTTCGAAGGCGGCGCCCACCTGCTAG GCAAACACCGCGCCCTGCGCCGCGTGCTACGCGCCACCGGCCACACCGCGGCACAAGCCATCTACGTCGGCGACCAAGTC GCCGACTGGGAAGCCGCACAGGTGCTTGGCCTCCCATTTGCTGCGGTTGCCTGGGGTTACGCCCATCCGGACGTTTTCAT GCAACTGCCAAACACACACCTGATTGAAGAGGTTGAGGGGTTGATTGCTTTGCCTGGGCATTAG
Upstream 100 bases:
>100_bases ACGCCTGACGCCGTCGCCTGCGCGCACACGTGGGGACGTGTGTGCGTGCGGCGAACGTGTGCCGGCGCGTACGCTAGGGC GCCAATACCCCTACATTGCG
Downstream 100 bases:
>100_bases CGCTTCAACTGTCGCCTGGCCTGTCCTTTGGATCGTTGTTCGAGGAAAGCCAAACGTGCTGGACGCATCTGCCCAACATG CACTGATTGAACAGGTTGAG
Product: VirP protein
Products: NA
Alternate protein names: PGP; PGPase [H]
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MPALIIFDFDGTLADSFGFFLSTQRTLAARHGFRAAEAHEVDAARRLTTRELLKHSGLRSWRVPLVAADFIRLMRAAPPP ALFPGVDAALRALHASGTRLALVSSNSVDNVQRALGAELSALFAVFEGGAHLLGKHRALRRVLRATGHTAAQAIYVGDQV ADWEAAQVLGLPFAAVAWGYAHPDVFMQLPNTHLIEEVEGLIALPGH
Sequences:
>Translated_207_residues MPALIIFDFDGTLADSFGFFLSTQRTLAARHGFRAAEAHEVDAARRLTTRELLKHSGLRSWRVPLVAADFIRLMRAAPPP ALFPGVDAALRALHASGTRLALVSSNSVDNVQRALGAELSALFAVFEGGAHLLGKHRALRRVLRATGHTAAQAIYVGDQV ADWEAAQVLGLPFAAVAWGYAHPDVFMQLPNTHLIEEVEGLIALPGH >Mature_206_residues PALIIFDFDGTLADSFGFFLSTQRTLAARHGFRAAEAHEVDAARRLTTRELLKHSGLRSWRVPLVAADFIRLMRAAPPPA LFPGVDAALRALHASGTRLALVSSNSVDNVQRALGAELSALFAVFEGGAHLLGKHRALRRVLRATGHTAAQAIYVGDQVA DWEAAQVLGLPFAAVAWGYAHPDVFMQLPNTHLIEEVEGLIALPGH
Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate [H]
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.18 [H]
Molecular weight: Translated: 22312; Mature: 22181
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALIIFDFDGTLADSFGFFLSTQRTLAARHGFRAAEAHEVDAARRLTTRELLKHSGLRS CCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH WRVPLVAADFIRLMRAAPPPALFPGVDAALRALHASGTRLALVSSNSVDNVQRALGAELS HCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH ALFAVFEGGAHLLGKHRALRRVLRATGHTAAQAIYVGDQVADWEAAQVLGLPFAAVAWGY HHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCHHHHHHCCCHHHHHHCC AHPDVFMQLPNTHLIEEVEGLIALPGH CCCHHEEECCCHHHHHHHCCCEECCCC >Mature Secondary Structure PALIIFDFDGTLADSFGFFLSTQRTLAARHGFRAAEAHEVDAARRLTTRELLKHSGLRS CEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH WRVPLVAADFIRLMRAAPPPALFPGVDAALRALHASGTRLALVSSNSVDNVQRALGAELS HCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH ALFAVFEGGAHLLGKHRALRRVLRATGHTAAQAIYVGDQVADWEAAQVLGLPFAAVAWGY HHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCHHHHHHCCCHHHHHHCC AHPDVFMQLPNTHLIEEVEGLIALPGH CCCHHEEECCCHHHHHHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8654968 [H]