Definition Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome.
Accession NC_007086
Length 5,148,708

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The map label for this gene is yjjJ [H]

Identifier: 66766883

GI number: 66766883

Start: 650624

End: 651982

Strand: Reverse

Name: yjjJ [H]

Synonym: XC_0544

Alternate gene names: 66766883

Gene position: 651982-650624 (Counterclockwise)

Preceding gene: 66766888

Following gene: 77761094

Centisome position: 12.66

GC content: 62.69

Gene sequence:

>1359_bases
GTGGAGCGCCTGATCACCACGCTGCGCGTCAACGGCCCCATGCGTGGGGCCGAGTTGGCGGTGCGCGTGGGCGTGAGCCG
GCCGACTCTGTCTCGCCTAGTCGCAGATGCAGGCCCTGCGGTGCTGCGTTATGGCAGGGCGCGCAGCACCGGCTACGCGG
CCACCGGTGAACTGCGGGGCGAGCGTATGTGGCCGCTCTATCGGATTGATCACGATGCCCGCGTCATACCGCTGGGCCAA
CTATTGGCACTCCACGACGACCACTTCTTTGTCGAACTTTTGCAGGACAACCCCGTTCTATTGCATTCGCCATTGGACAC
CGGCGTGTTCGCATCGCTGCCCTGGTTTATAGACGACCAAAGGCCGCAGGGATTTCTTGGTCGCAACCTGGCACACCGTA
TTTCTGCGCCGTTGCGCCTTCCGGACAACTTGGCGCTGTGGTCGCCCAGGGACAACCTTGTGGCCATGCTGTCGGTTGGT
CACGACCAGCCTGGCGATCTGCTGATCGGCGAGCGCGCACTGGCTCTGGCTTTGGCGGCGATCGAACACCCTGAAGTTAT
CGCCACGCAGGCACGCACCGAGGAATATCTCAGTCGCGCCGAAGCTGCATTGCGCGGCGAGGCCGTTGGCTCGTCTGCCG
CCGGCAAACAGCCGAAGTTCACCGCAGTGCTGAAGGAACGCGAAGCATACCGACCCGTGATCGTCAAGTTCACCGATCAG
ATCGATCAACCCACCGGCCGGCGCTGGGCGGATCTTTTACAGATGGAATGGTTGGCCAGCCAGATTCTCGTTGCCGCCGG
CATCCCTGCTGCGGCAACACAGGTACTGCAGGCAGGCGGGCGCGTCTTTCTCGAATCGACACGCTTCGATCGGACTGCTG
CGTTAGGCCGACGCGGATTCGTCTCGCTGATGTCGCTGTTTGCGTCCTTTTATGGCGACGCAAACGTCAGCACCTGGCGA
ACACTTGCTCCACTACTCAAACGCGATGGCTGGCTGAGCCCGGAAGACGCCGAGCGCCTGGAAGTGATCAGCTGGTTCGG
GACCCTCATCGGCAATACCGACATGCACCTGGGCAATGCCGCACTGGTACTCGCCGATACCCTGCCCCTGCAGCTTGCCC
CGGTGTACGACATGTTGCCGATGGCGCTGCGCCCGGCATCCAGTGGCGAAGTCGTGCACAGAGACATCGAGATTCCGCCG
CCCACCGTGGATCAATTCGCCCAATGGCGGCGCGCTGCCGGAATGGCCGAGCAGTTCTGGCAACATGCGATCGACGACGA
CACTCTGAGCGAACAGATGCGCGGCATTGCCACGCGCGCGTTGGCAAGCTTGCGTCGAACCGCATCACGCCTTGCCTGA

Upstream 100 bases:

>100_bases
TGGTACGGCTCAGCGGGGGCAGGTCACGTAGAATTTCTTACGGCTTAGTATCGTTTCAGACATCGTTTCAAAAGCTGCGT
TTCATGCCCCGTATAGCTGT

Downstream 100 bases:

>100_bases
CCATGTGGCATCAACACCGCACCACACGCCGCGGTGCAATACCGTGACGTGCGATGCGGCACCACCTTCACTCAGAACGT
AAACACATACTCCGCCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MERLITTLRVNGPMRGAELAVRVGVSRPTLSRLVADAGPAVLRYGRARSTGYAATGELRGERMWPLYRIDHDARVIPLGQ
LLALHDDHFFVELLQDNPVLLHSPLDTGVFASLPWFIDDQRPQGFLGRNLAHRISAPLRLPDNLALWSPRDNLVAMLSVG
HDQPGDLLIGERALALALAAIEHPEVIATQARTEEYLSRAEAALRGEAVGSSAAGKQPKFTAVLKEREAYRPVIVKFTDQ
IDQPTGRRWADLLQMEWLASQILVAAGIPAAATQVLQAGGRVFLESTRFDRTAALGRRGFVSLMSLFASFYGDANVSTWR
TLAPLLKRDGWLSPEDAERLEVISWFGTLIGNTDMHLGNAALVLADTLPLQLAPVYDMLPMALRPASSGEVVHRDIEIPP
PTVDQFAQWRRAAGMAEQFWQHAIDDDTLSEQMRGIATRALASLRRTASRLA

Sequences:

>Translated_452_residues
MERLITTLRVNGPMRGAELAVRVGVSRPTLSRLVADAGPAVLRYGRARSTGYAATGELRGERMWPLYRIDHDARVIPLGQ
LLALHDDHFFVELLQDNPVLLHSPLDTGVFASLPWFIDDQRPQGFLGRNLAHRISAPLRLPDNLALWSPRDNLVAMLSVG
HDQPGDLLIGERALALALAAIEHPEVIATQARTEEYLSRAEAALRGEAVGSSAAGKQPKFTAVLKEREAYRPVIVKFTDQ
IDQPTGRRWADLLQMEWLASQILVAAGIPAAATQVLQAGGRVFLESTRFDRTAALGRRGFVSLMSLFASFYGDANVSTWR
TLAPLLKRDGWLSPEDAERLEVISWFGTLIGNTDMHLGNAALVLADTLPLQLAPVYDMLPMALRPASSGEVVHRDIEIPP
PTVDQFAQWRRAAGMAEQFWQHAIDDDTLSEQMRGIATRALASLRRTASRLA
>Mature_452_residues
MERLITTLRVNGPMRGAELAVRVGVSRPTLSRLVADAGPAVLRYGRARSTGYAATGELRGERMWPLYRIDHDARVIPLGQ
LLALHDDHFFVELLQDNPVLLHSPLDTGVFASLPWFIDDQRPQGFLGRNLAHRISAPLRLPDNLALWSPRDNLVAMLSVG
HDQPGDLLIGERALALALAAIEHPEVIATQARTEEYLSRAEAALRGEAVGSSAAGKQPKFTAVLKEREAYRPVIVKFTDQ
IDQPTGRRWADLLQMEWLASQILVAAGIPAAATQVLQAGGRVFLESTRFDRTAALGRRGFVSLMSLFASFYGDANVSTWR
TLAPLLKRDGWLSPEDAERLEVISWFGTLIGNTDMHLGNAALVLADTLPLQLAPVYDMLPMALRPASSGEVVHRDIEIPP
PTVDQFAQWRRAAGMAEQFWQHAIDDDTLSEQMRGIATRALASLRRTASRLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790845, Length=453, Percent_Identity=34.878587196468, Blast_Score=226, Evalue=2e-60,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012893
- InterPro:   IPR012894 [H]

Pfam domain/function: PF07804 HipA_C; PF07805 HipA_N [H]

EC number: NA

Molecular weight: Translated: 49785; Mature: 49785

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLITTLRVNGPMRGAELAVRVGVSRPTLSRLVADAGPAVLRYGRARSTGYAATGELRG
CCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCC
ERMWPLYRIDHDARVIPLGQLLALHDDHFFVELLQDNPVLLHSPLDTGVFASLPWFIDDQ
CCCCCEEEECCCCEEEEHHHHHHHCCCCEEEEEECCCCEEEECCCCCCHHHCCCCEECCC
RPQGFLGRNLAHRISAPLRLPDNLALWSPRDNLVAMLSVGHDQPGDLLIGERALALALAA
CCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCEEECHHHHHHHHHH
IEHPEVIATQARTEEYLSRAEAALRGEAVGSSAAGKQPKFTAVLKEREAYRPVIVKFTDQ
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECHH
IDQPTGRRWADLLQMEWLASQILVAAGIPAAATQVLQAGGRVFLESTRFDRTAALGRRGF
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
VSLMSLFASFYGDANVSTWRTLAPLLKRDGWLSPEDAERLEVISWFGTLIGNTDMHLGNA
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCE
ALVLADTLPLQLAPVYDMLPMALRPASSGEVVHRDIEIPPPTVDQFAQWRRAAGMAEQFW
EEEEEECCCCEECCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHH
QHAIDDDTLSEQMRGIATRALASLRRTASRLA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MERLITTLRVNGPMRGAELAVRVGVSRPTLSRLVADAGPAVLRYGRARSTGYAATGELRG
CCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCC
ERMWPLYRIDHDARVIPLGQLLALHDDHFFVELLQDNPVLLHSPLDTGVFASLPWFIDDQ
CCCCCEEEECCCCEEEEHHHHHHHCCCCEEEEEECCCCEEEECCCCCCHHHCCCCEECCC
RPQGFLGRNLAHRISAPLRLPDNLALWSPRDNLVAMLSVGHDQPGDLLIGERALALALAA
CCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCEEECHHHHHHHHHH
IEHPEVIATQARTEEYLSRAEAALRGEAVGSSAAGKQPKFTAVLKEREAYRPVIVKFTDQ
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECHH
IDQPTGRRWADLLQMEWLASQILVAAGIPAAATQVLQAGGRVFLESTRFDRTAALGRRGF
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
VSLMSLFASFYGDANVSTWRTLAPLLKRDGWLSPEDAERLEVISWFGTLIGNTDMHLGNA
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCE
ALVLADTLPLQLAPVYDMLPMALRPASSGEVVHRDIEIPPPTVDQFAQWRRAAGMAEQFW
EEEEEECCCCEECCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHH
QHAIDDDTLSEQMRGIATRALASLRRTASRLA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 3299264 [H]