Definition Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome.
Accession NC_007086
Length 5,148,708

Click here to switch to the map view.

The map label for this gene is 66766804

Identifier: 66766804

GI number: 66766804

Start: 552366

End: 552872

Strand: Reverse

Name: 66766804

Synonym: XC_0465

Alternate gene names: NA

Gene position: 552872-552366 (Counterclockwise)

Preceding gene: 66766806

Following gene: 66766803

Centisome position: 10.74

GC content: 64.69

Gene sequence:

>507_bases
TTGGCCCTTTTCCGAACGTCCCTGCACGCTCTCGCACTGAGCCTGGCACTGGTTGCCTGCAAGCCGCAGGCTGAGCCAGC
CGGCGCTGCGACACCTGCTGCGAATGCAGCACCTGCAGCGTCGGCATCCGCCACCGTTCCGGCAACGCCCGCGCAGGCGA
CAACCTGTCCCAGCGCCGACTTCTCTGCGTTTCTGAAAAGCTTCAGTGCAGACATTGCGGTACAGGAAAAAGCCACGGCC
GATCCGCTGACGATGATCCAACTCGACCCGGACGCACAGCCCGAGCCCACCCCGGTCACCCGCACGGTTCCGCTTGCCAA
GGTCGAATGGCCTGTCATCCCGAACCTGGAGGCAGCCCGCAACGGCGGCCGCGAGGTCACGATTTCCGAAGAAGCCGATG
GCCGCCAGGTACTGGTCCGCACACCGGACACCGGCGATCAGCAGGTCTACCACTTCGCGCAGCGCCCCTGCTGGATGCTG
GTCAAGGTGGACGACCAGTCTTTGTAA

Upstream 100 bases:

>100_bases
TGTGCAACCCACGCTCCGCAAGCCTTCACACATCGGCAAGCAGCGCGCGTATAACATCCCGCCCGCGCTCCAGCTTGCCC
GCTATGATCAGGAGGATCCA

Downstream 100 bases:

>100_bases
ACGTCGGTGGGCGCTGGAAGCAGGTTCTGCCGGCTTGGCTATCGTCACCTACAACTCAAACCGTCAAAGAGGCGACTTGA
TGCGACGCTTCATCTCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MALFRTSLHALALSLALVACKPQAEPAGAATPAANAAPAASASATVPATPAQATTCPSADFSAFLKSFSADIAVQEKATA
DPLTMIQLDPDAQPEPTPVTRTVPLAKVEWPVIPNLEAARNGGREVTISEEADGRQVLVRTPDTGDQQVYHFAQRPCWML
VKVDDQSL

Sequences:

>Translated_168_residues
MALFRTSLHALALSLALVACKPQAEPAGAATPAANAAPAASASATVPATPAQATTCPSADFSAFLKSFSADIAVQEKATA
DPLTMIQLDPDAQPEPTPVTRTVPLAKVEWPVIPNLEAARNGGREVTISEEADGRQVLVRTPDTGDQQVYHFAQRPCWML
VKVDDQSL
>Mature_167_residues
ALFRTSLHALALSLALVACKPQAEPAGAATPAANAAPAASASATVPATPAQATTCPSADFSAFLKSFSADIAVQEKATAD
PLTMIQLDPDAQPEPTPVTRTVPLAKVEWPVIPNLEAARNGGREVTISEEADGRQVLVRTPDTGDQQVYHFAQRPCWMLV
KVDDQSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17631; Mature: 17500

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFRTSLHALALSLALVACKPQAEPAGAATPAANAAPAASASATVPATPAQATTCPSAD
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
FSAFLKSFSADIAVQEKATADPLTMIQLDPDAQPEPTPVTRTVPLAKVEWPVIPNLEAAR
HHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEEECCCEEECCCCCCCCHHHH
NGGREVTISEEADGRQVLVRTPDTGDQQVYHFAQRPCWMLVKVDDQSL
CCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEEECCCCC
>Mature Secondary Structure 
ALFRTSLHALALSLALVACKPQAEPAGAATPAANAAPAASASATVPATPAQATTCPSAD
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
FSAFLKSFSADIAVQEKATADPLTMIQLDPDAQPEPTPVTRTVPLAKVEWPVIPNLEAAR
HHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEEECCCEEECCCCCCCCHHHH
NGGREVTISEEADGRQVLVRTPDTGDQQVYHFAQRPCWMLVKVDDQSL
CCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA