Click here to switch to the map view.

The map label for this gene is 66766802

Identifier: 66766802

GI number: 66766802

Start: 548824

End: 549309

Strand: Reverse

Name: 66766802

Synonym: XC_0462

Alternate gene names: NA

Gene position: 549309-548824 (Counterclockwise)

Preceding gene: 66766803

Following gene: 66766800

Centisome position: 10.67

GC content: 64.61

Gene sequence:

>486_bases
ATGACCGAACGCACCACGACCGCGCGCCCGCTCGAGCGCTATTTCGCCAGTTATTCCGACGACCACCGCAATGCGACCAA
CCAGCAGATCCACGTGCTGGCGGTGCCGGCGATCCTGTGGTCGGTGGTGGCCTTGCTGTGGTGCATCCCGGTGGGCGGGA
CCTGGTTCAGCAGCGGCGTGTGGGCGGCGCTGGCAATGTTCGGGGCGTGGTCATATTACAACCGGCTGTCGCGGCCGCTT
GGCCTGGGCATGCTGGCGATCTTTTTCTTTTTCGGCTGTCTGTGCCGGCTGATCGAGGGCCGACTGGGCCTGGGCGGCCT
GTTCACGCTGGCGGTGACGGTGTTCGTGCTGGCATGGATCGCGCAGTTTGTCGGCCACAAGATCGAAGGCCGCAAGCCGA
GCTTTCTGACCGACCTGACCTATCTGCTGATCGGGCCGCTGTGGGTGCTGGCGAAGTTGTATCGCCACCTGGGCTGGCGG
TTCTGA

Upstream 100 bases:

>100_bases
CACGCGCTGGTGCGTGGCAGGTTCTGTTCCCGGCAGCTGCCCCGCAAGCGCCACTGCGGCCATCCGCGCGCGTATGCTTG
GGCCATTCCTGGGAGGGAAC

Downstream 100 bases:

>100_bases
TCTTCGGGTTCCCCGAGTCAGCGATACCGCGCTGACGCCAACGCAGGCTACTCGCCGATACCCAGCTCTTCCGGCAGCGG
GCGAAACGCACGCGGTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTERTTTARPLERYFASYSDDHRNATNQQIHVLAVPAILWSVVALLWCIPVGGTWFSSGVWAALAMFGAWSYYNRLSRPL
GLGMLAIFFFFGCLCRLIEGRLGLGGLFTLAVTVFVLAWIAQFVGHKIEGRKPSFLTDLTYLLIGPLWVLAKLYRHLGWR
F

Sequences:

>Translated_161_residues
MTERTTTARPLERYFASYSDDHRNATNQQIHVLAVPAILWSVVALLWCIPVGGTWFSSGVWAALAMFGAWSYYNRLSRPL
GLGMLAIFFFFGCLCRLIEGRLGLGGLFTLAVTVFVLAWIAQFVGHKIEGRKPSFLTDLTYLLIGPLWVLAKLYRHLGWR
F
>Mature_160_residues
TERTTTARPLERYFASYSDDHRNATNQQIHVLAVPAILWSVVALLWCIPVGGTWFSSGVWAALAMFGAWSYYNRLSRPLG
LGMLAIFFFFGCLCRLIEGRLGLGGLFTLAVTVFVLAWIAQFVGHKIEGRKPSFLTDLTYLLIGPLWVLAKLYRHLGWRF

Specific function: Unknown

COG id: COG4539

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18233; Mature: 18102

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERTTTARPLERYFASYSDDHRNATNQQIHVLAVPAILWSVVALLWCIPVGGTWFSSGV
CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
WAALAMFGAWSYYNRLSRPLGLGMLAIFFFFGCLCRLIEGRLGLGGLFTLAVTVFVLAWI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AQFVGHKIEGRKPSFLTDLTYLLIGPLWVLAKLYRHLGWRF
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TERTTTARPLERYFASYSDDHRNATNQQIHVLAVPAILWSVVALLWCIPVGGTWFSSGV
CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
WAALAMFGAWSYYNRLSRPLGLGMLAIFFFFGCLCRLIEGRLGLGGLFTLAVTVFVLAWI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AQFVGHKIEGRKPSFLTDLTYLLIGPLWVLAKLYRHLGWRF
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA