| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is rhlE [H]
Identifier: 66766780
GI number: 66766780
Start: 519976
End: 521268
Strand: Reverse
Name: rhlE [H]
Synonym: XC_0438
Alternate gene names: 66766780
Gene position: 521268-519976 (Counterclockwise)
Preceding gene: 66766781
Following gene: 66766774
Centisome position: 10.12
GC content: 69.45
Gene sequence:
>1293_bases ATGTCACTGAAAGCAGATTTGCTGTCGCTACAGCTACAGCCCGTGTTCGAGTCCGCGCTCGCCAGGGCCGGTGTGCGTGC GCTCACGCCGATCCAGGTCGCGATGATTCCGCCGATGCTGGCCGCACGCGACCTGATCGCCACCGCGCAGACCGGCTCGG GCAAGACCCTGGCGTATGCCTTGCCGCTGCTGCAGCAGCGCCTGCAGGCGCCGGAACAGGCGCCGCGCGTGCTGGGCGGG CTGATCCTGGTACCGACGCGTGAGCTGGTCGCGCAGGTCGCGCACACCCTGCTGTCGCTGGCCGCCGCCTTGCCGCGACG GCTGAAGATCGTCGCCGCCACCGGCGGTGAAGCCATCAATCCGCAGCTGATGGCCTTGCGCGGTGGCGCCGACATCGTCA TCGCCACCCCGGGGCGGCTGCTGGACCTGGTGACGCACAATGCGCTGCGCCTCTCGCAGGTAAGCACGCTGGTGCTGGAC GAAGCCGATCGCCTGCTCGACCTGGGCTTTGGCGCCGAGCTCGATCGCATCCTGGCCTTGCTGCCTGCCCAGCGGCAAAG CGTGCTGGTCTCGGCCACCTTCCCAGCCGCCATCGCGTCGCTGGCCAAGCGTCGCCTGCGCGATCCGTTGCGCATCACCC TCGGCGGCACGCCCGAACAGGCACCGGCGATCGCGCAACGCGCCATCGCAGTGGATGCCGGCCAACGTACGCAGCTGCTG CGCCACCTGCTGCTGGAACACGGATGGCCGCAACTGCTGGTCTTCGTCACCAGCCGCCACGGCGCCGACAAGGTTGCCGA GAAACTGAGCAAGACCGGCATCGCCGCCTTGCCGCTGCACGGCGAATTGAGCCAGGGCCGCCGCGAACGCACGCTGCGCG CCTTCAAACAGGCGGACGTGCAGGTGCTGGTGGCCACCGACCTGGCCGGGCGCGGCATCGACATCGACGCCTTGCCGGCC GTGCTCAATTACGACCTGCCCCGCTCCACTGTCGACTACACCCACCGCATCGGCCGCACCGCACGCGCCGGTGCCAGCGG CGTGGCGATCAGCTTCGTCACGGCAGACAGCGCCCAGCAGTGGCGGCTGATCGAAAAACGCCAGGGCCTGCGCGTGCCGA CCAGCGTGATCGAAGGGTTCGAGCCAACTCCGGTCCAGGCGCCTGCCCCCGACCATGCGTCCGGCGCAGCGGCGCGTGCA GCGGATGACAACGGCGGCATCAAGGGCAAGCGGCCGAGCAAGAAGGACAAATTACGTGCCGCGGCGCAGGCGCAGGCTGG CAAGCCGGGCTGA
Upstream 100 bases:
>100_bases CCACTGCCGCTTGGCGGCGCCGTGGAGCGCCATGCGCGGCTAGCGCACCTGCACTTCGTTTCGGCATGCACGCCGTCGAC AATGCGCGGATAATCGCGCG
Downstream 100 bases:
>100_bases AAGTAGCGAACGTACCGGCGCGAGCAGTCCTAGCACCGGTGCGTGATGACTGCGCCCACACCGTCGCACTGCAGCGCGGG CTGGCCTGGCAACCGCCGGC
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MSLKADLLSLQLQPVFESALARAGVRALTPIQVAMIPPMLAARDLIATAQTGSGKTLAYALPLLQQRLQAPEQAPRVLGG LILVPTRELVAQVAHTLLSLAAALPRRLKIVAATGGEAINPQLMALRGGADIVIATPGRLLDLVTHNALRLSQVSTLVLD EADRLLDLGFGAELDRILALLPAQRQSVLVSATFPAAIASLAKRRLRDPLRITLGGTPEQAPAIAQRAIAVDAGQRTQLL RHLLLEHGWPQLLVFVTSRHGADKVAEKLSKTGIAALPLHGELSQGRRERTLRAFKQADVQVLVATDLAGRGIDIDALPA VLNYDLPRSTVDYTHRIGRTARAGASGVAISFVTADSAQQWRLIEKRQGLRVPTSVIEGFEPTPVQAPAPDHASGAAARA ADDNGGIKGKRPSKKDKLRAAAQAQAGKPG
Sequences:
>Translated_430_residues MSLKADLLSLQLQPVFESALARAGVRALTPIQVAMIPPMLAARDLIATAQTGSGKTLAYALPLLQQRLQAPEQAPRVLGG LILVPTRELVAQVAHTLLSLAAALPRRLKIVAATGGEAINPQLMALRGGADIVIATPGRLLDLVTHNALRLSQVSTLVLD EADRLLDLGFGAELDRILALLPAQRQSVLVSATFPAAIASLAKRRLRDPLRITLGGTPEQAPAIAQRAIAVDAGQRTQLL RHLLLEHGWPQLLVFVTSRHGADKVAEKLSKTGIAALPLHGELSQGRRERTLRAFKQADVQVLVATDLAGRGIDIDALPA VLNYDLPRSTVDYTHRIGRTARAGASGVAISFVTADSAQQWRLIEKRQGLRVPTSVIEGFEPTPVQAPAPDHASGAAARA ADDNGGIKGKRPSKKDKLRAAAQAQAGKPG >Mature_429_residues SLKADLLSLQLQPVFESALARAGVRALTPIQVAMIPPMLAARDLIATAQTGSGKTLAYALPLLQQRLQAPEQAPRVLGGL ILVPTRELVAQVAHTLLSLAAALPRRLKIVAATGGEAINPQLMALRGGADIVIATPGRLLDLVTHNALRLSQVSTLVLDE ADRLLDLGFGAELDRILALLPAQRQSVLVSATFPAAIASLAKRRLRDPLRITLGGTPEQAPAIAQRAIAVDAGQRTQLLR HLLLEHGWPQLLVFVTSRHGADKVAEKLSKTGIAALPLHGELSQGRRERTLRAFKQADVQVLVATDLAGRGIDIDALPAV LNYDLPRSTVDYTHRIGRTARAGASGVAISFVTADSAQQWRLIEKRQGLRVPTSVIEGFEPTPVQAPAPDHASGAAARAA DDNGGIKGKRPSKKDKLRAAAQAQAGKPG
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI41327771, Length=383, Percent_Identity=37.0757180156658, Blast_Score=235, Evalue=7e-62, Organism=Homo sapiens, GI188035877, Length=365, Percent_Identity=37.2602739726027, Blast_Score=232, Evalue=4e-61, Organism=Homo sapiens, GI222352149, Length=362, Percent_Identity=36.7403314917127, Blast_Score=228, Evalue=7e-60, Organism=Homo sapiens, GI20149629, Length=346, Percent_Identity=36.4161849710983, Blast_Score=227, Evalue=1e-59, Organism=Homo sapiens, GI224593278, Length=354, Percent_Identity=38.4180790960452, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=36.0795454545455, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI262118318, Length=364, Percent_Identity=36.8131868131868, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI13518015, Length=364, Percent_Identity=36.8131868131868, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI45446747, Length=332, Percent_Identity=39.4578313253012, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI45446743, Length=332, Percent_Identity=39.4578313253012, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI216548263, Length=364, Percent_Identity=36.8131868131868, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI262231852, Length=364, Percent_Identity=36.8131868131868, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI21071032, Length=346, Percent_Identity=35.5491329479769, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI55749865, Length=353, Percent_Identity=34.5609065155807, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI4758138, Length=347, Percent_Identity=36.0230547550432, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI148613856, Length=345, Percent_Identity=36.5217391304348, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI38201710, Length=345, Percent_Identity=36.5217391304348, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI164664518, Length=376, Percent_Identity=32.7127659574468, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI301171475, Length=345, Percent_Identity=36.8115942028986, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI301171467, Length=345, Percent_Identity=36.8115942028986, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI87196351, Length=345, Percent_Identity=36.8115942028986, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI169881239, Length=345, Percent_Identity=36.231884057971, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI13514809, Length=345, Percent_Identity=36.231884057971, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI7661920, Length=373, Percent_Identity=31.3672922252011, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI164419743, Length=347, Percent_Identity=35.7348703170029, Blast_Score=192, Evalue=3e-49, Organism=Homo sapiens, GI51094101, Length=347, Percent_Identity=35.7348703170029, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI13129006, Length=359, Percent_Identity=33.4261838440111, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI38569505, Length=343, Percent_Identity=35.2769679300292, Blast_Score=191, Evalue=8e-49, Organism=Homo sapiens, GI38569503, Length=370, Percent_Identity=34.5945945945946, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI41327779, Length=366, Percent_Identity=34.4262295081967, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI50659095, Length=364, Percent_Identity=32.1428571428571, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI31542656, Length=339, Percent_Identity=35.3982300884956, Blast_Score=181, Evalue=8e-46, Organism=Homo sapiens, GI41327776, Length=366, Percent_Identity=32.7868852459016, Blast_Score=181, Evalue=9e-46, Organism=Homo sapiens, GI38327634, Length=333, Percent_Identity=35.1351351351351, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI83700235, Length=367, Percent_Identity=33.5149863760218, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI4503529, Length=344, Percent_Identity=33.1395348837209, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI21040371, Length=349, Percent_Identity=28.6532951289398, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI13514831, Length=336, Percent_Identity=32.1428571428571, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI4758112, Length=349, Percent_Identity=28.080229226361, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI18375623, Length=349, Percent_Identity=28.080229226361, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI17505907, Length=381, Percent_Identity=32.5459317585302, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI256223453, Length=360, Percent_Identity=30.5555555555556, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI9506931, Length=376, Percent_Identity=31.6489361702128, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI8922886, Length=377, Percent_Identity=31.0344827586207, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI6005743, Length=377, Percent_Identity=31.2997347480106, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI62241022, Length=362, Percent_Identity=31.767955801105, Blast_Score=142, Evalue=4e-34, Organism=Homo sapiens, GI154759257, Length=413, Percent_Identity=28.3292978208232, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI4826686, Length=349, Percent_Identity=28.9398280802292, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI164419732, Length=350, Percent_Identity=31.1428571428571, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI256773275, Length=390, Percent_Identity=33.5897435897436, Blast_Score=138, Evalue=8e-33, Organism=Homo sapiens, GI62241024, Length=341, Percent_Identity=31.6715542521994, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI9966805, Length=323, Percent_Identity=31.2693498452012, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI20336298, Length=197, Percent_Identity=40.6091370558376, Blast_Score=116, Evalue=3e-26, Organism=Escherichia coli, GI1787016, Length=378, Percent_Identity=46.5608465608466, Blast_Score=330, Evalue=1e-91, Organism=Escherichia coli, GI87082221, Length=360, Percent_Identity=38.8888888888889, Blast_Score=245, Evalue=3e-66, Organism=Escherichia coli, GI1787605, Length=353, Percent_Identity=41.643059490085, Blast_Score=243, Evalue=2e-65, Organism=Escherichia coli, GI1790214, Length=372, Percent_Identity=36.8279569892473, Blast_Score=214, Evalue=9e-57, Organism=Escherichia coli, GI1788930, Length=321, Percent_Identity=41.1214953271028, Blast_Score=209, Evalue=3e-55, Organism=Caenorhabditis elegans, GI32565321, Length=370, Percent_Identity=38.1081081081081, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17555296, Length=411, Percent_Identity=35.7664233576642, Blast_Score=235, Evalue=4e-62, Organism=Caenorhabditis elegans, GI17552114, Length=375, Percent_Identity=33.8666666666667, Blast_Score=228, Evalue=4e-60, Organism=Caenorhabditis elegans, GI86570094, Length=334, Percent_Identity=38.9221556886228, Blast_Score=228, Evalue=6e-60, Organism=Caenorhabditis elegans, GI17510307, Length=357, Percent_Identity=38.0952380952381, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI17510309, Length=357, Percent_Identity=38.0952380952381, Blast_Score=221, Evalue=6e-58, Organism=Caenorhabditis elegans, GI71995514, Length=357, Percent_Identity=38.0952380952381, Blast_Score=221, Evalue=8e-58, Organism=Caenorhabditis elegans, GI115533224, Length=341, Percent_Identity=35.4838709677419, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17507945, Length=354, Percent_Identity=35.5932203389831, Blast_Score=218, Evalue=5e-57, Organism=Caenorhabditis elegans, GI71987143, Length=366, Percent_Identity=33.0601092896175, Blast_Score=214, Evalue=8e-56, Organism=Caenorhabditis elegans, GI17510559, Length=370, Percent_Identity=35.9459459459459, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17537549, Length=349, Percent_Identity=37.2492836676218, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI71995718, Length=372, Percent_Identity=36.0215053763441, Blast_Score=204, Evalue=9e-53, Organism=Caenorhabditis elegans, GI17552642, Length=341, Percent_Identity=35.7771260997067, Blast_Score=202, Evalue=2e-52, Organism=Caenorhabditis elegans, GI71995724, Length=373, Percent_Identity=32.9758713136729, Blast_Score=201, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17507121, Length=373, Percent_Identity=32.7077747989276, Blast_Score=201, Evalue=8e-52, Organism=Caenorhabditis elegans, GI71999646, Length=341, Percent_Identity=33.1378299120235, Blast_Score=191, Evalue=9e-49, Organism=Caenorhabditis elegans, GI71999644, Length=341, Percent_Identity=33.1378299120235, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=32.6145552560647, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=31.8918918918919, Blast_Score=184, Evalue=6e-47, Organism=Caenorhabditis elegans, GI17507881, Length=364, Percent_Identity=33.2417582417582, Blast_Score=181, Evalue=9e-46, Organism=Caenorhabditis elegans, GI115532546, Length=358, Percent_Identity=31.2849162011173, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17509811, Length=334, Percent_Identity=33.5329341317365, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI115532548, Length=352, Percent_Identity=31.5340909090909, Blast_Score=178, Evalue=6e-45, Organism=Caenorhabditis elegans, GI17505370, Length=332, Percent_Identity=34.9397590361446, Blast_Score=177, Evalue=8e-45, Organism=Caenorhabditis elegans, GI71982858, Length=349, Percent_Identity=28.6532951289398, Blast_Score=171, Evalue=5e-43, Organism=Caenorhabditis elegans, GI71990816, Length=372, Percent_Identity=33.3333333333333, Blast_Score=168, Evalue=6e-42, Organism=Caenorhabditis elegans, GI17508543, Length=391, Percent_Identity=31.9693094629156, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17556951, Length=380, Percent_Identity=27.3684210526316, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI193208216, Length=372, Percent_Identity=31.7204301075269, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI193206561, Length=331, Percent_Identity=32.02416918429, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17553716, Length=362, Percent_Identity=28.4530386740331, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI25148291, Length=347, Percent_Identity=26.2247838616715, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI25148203, Length=380, Percent_Identity=25.5263157894737, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17507641, Length=387, Percent_Identity=29.1989664082687, Blast_Score=128, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17536101, Length=404, Percent_Identity=27.970297029703, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17536099, Length=404, Percent_Identity=27.970297029703, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI32564046, Length=378, Percent_Identity=29.3650793650794, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17536103, Length=408, Percent_Identity=27.6960784313726, Blast_Score=124, Evalue=7e-29, Organism=Caenorhabditis elegans, GI71997889, Length=378, Percent_Identity=25.9259259259259, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI25148205, Length=346, Percent_Identity=24.2774566473988, Blast_Score=108, Evalue=7e-24, Organism=Caenorhabditis elegans, GI71987152, Length=87, Percent_Identity=45.9770114942529, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI71982862, Length=199, Percent_Identity=29.1457286432161, Blast_Score=91, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6324217, Length=339, Percent_Identity=37.4631268436578, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6321856, Length=371, Percent_Identity=36.6576819407008, Blast_Score=219, Evalue=7e-58, Organism=Saccharomyces cerevisiae, GI6320449, Length=347, Percent_Identity=35.4466858789625, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6325138, Length=344, Percent_Identity=37.5, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6323021, Length=373, Percent_Identity=37.2654155495979, Blast_Score=213, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6324778, Length=348, Percent_Identity=36.4942528735632, Blast_Score=213, Evalue=5e-56, Organism=Saccharomyces cerevisiae, GI6320224, Length=376, Percent_Identity=32.7127659574468, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6321360, Length=335, Percent_Identity=36.1194029850746, Blast_Score=206, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6320041, Length=355, Percent_Identity=31.5492957746479, Blast_Score=199, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6321111, Length=372, Percent_Identity=31.7204301075269, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6323947, Length=354, Percent_Identity=35.3107344632768, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6319714, Length=359, Percent_Identity=32.5905292479109, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6320173, Length=410, Percent_Identity=30.9756097560976, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322912, Length=344, Percent_Identity=32.5581395348837, Blast_Score=176, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6322323, Length=344, Percent_Identity=32.5581395348837, Blast_Score=176, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6320119, Length=378, Percent_Identity=29.3650793650794, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6321267, Length=348, Percent_Identity=34.4827586206897, Blast_Score=172, Evalue=8e-44, Organism=Saccharomyces cerevisiae, GI6322427, Length=349, Percent_Identity=34.0974212034384, Blast_Score=169, Evalue=7e-43, Organism=Saccharomyces cerevisiae, GI6321963, Length=380, Percent_Identity=33.1578947368421, Blast_Score=164, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6319618, Length=387, Percent_Identity=31.7829457364341, Blast_Score=163, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6324620, Length=348, Percent_Identity=31.8965517241379, Blast_Score=153, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6320400, Length=395, Percent_Identity=27.3417721518987, Blast_Score=150, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6323306, Length=398, Percent_Identity=28.643216080402, Blast_Score=146, Evalue=6e-36, Organism=Saccharomyces cerevisiae, GI6322876, Length=414, Percent_Identity=26.5700483091787, Blast_Score=133, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6324366, Length=351, Percent_Identity=27.9202279202279, Blast_Score=114, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6321374, Length=408, Percent_Identity=26.9607843137255, Blast_Score=109, Evalue=8e-25, Organism=Drosophila melanogaster, GI24584994, Length=372, Percent_Identity=37.3655913978495, Blast_Score=238, Evalue=5e-63, Organism=Drosophila melanogaster, GI24642151, Length=346, Percent_Identity=37.2832369942197, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI24585582, Length=362, Percent_Identity=35.3591160220994, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI24584399, Length=353, Percent_Identity=36.5439093484419, Blast_Score=223, Evalue=1e-58, Organism=Drosophila melanogaster, GI17985987, Length=367, Percent_Identity=36.5122615803815, Blast_Score=218, Evalue=5e-57, Organism=Drosophila melanogaster, GI24583279, Length=367, Percent_Identity=33.2425068119891, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI24583281, Length=367, Percent_Identity=33.2425068119891, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI24662330, Length=344, Percent_Identity=38.6627906976744, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI17977678, Length=427, Percent_Identity=33.2552693208431, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI18857967, Length=381, Percent_Identity=34.1207349081365, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI21355075, Length=354, Percent_Identity=34.7457627118644, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI21356161, Length=354, Percent_Identity=35.8757062146893, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI24644487, Length=362, Percent_Identity=32.5966850828729, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI45551833, Length=362, Percent_Identity=32.5966850828729, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24644485, Length=362, Percent_Identity=32.5966850828729, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24644483, Length=362, Percent_Identity=32.5966850828729, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI281361218, Length=362, Percent_Identity=32.5966850828729, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24644481, Length=362, Percent_Identity=32.5966850828729, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24644479, Length=362, Percent_Identity=32.5966850828729, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI28574962, Length=352, Percent_Identity=33.8068181818182, Blast_Score=204, Evalue=8e-53, Organism=Drosophila melanogaster, GI28575014, Length=341, Percent_Identity=35.1906158357771, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24645031, Length=373, Percent_Identity=31.6353887399464, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI24666101, Length=360, Percent_Identity=36.1111111111111, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI24582080, Length=344, Percent_Identity=32.2674418604651, Blast_Score=181, Evalue=7e-46, Organism=Drosophila melanogaster, GI24582078, Length=344, Percent_Identity=32.2674418604651, Blast_Score=181, Evalue=7e-46, Organism=Drosophila melanogaster, GI17136248, Length=344, Percent_Identity=32.2674418604651, Blast_Score=181, Evalue=7e-46, Organism=Drosophila melanogaster, GI24582075, Length=344, Percent_Identity=32.2674418604651, Blast_Score=181, Evalue=7e-46, Organism=Drosophila melanogaster, GI17136814, Length=348, Percent_Identity=33.3333333333333, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI28571808, Length=338, Percent_Identity=33.7278106508876, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI28571809, Length=338, Percent_Identity=33.7278106508876, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24642822, Length=393, Percent_Identity=29.7709923664122, Blast_Score=164, Evalue=9e-41, Organism=Drosophila melanogaster, GI17647335, Length=381, Percent_Identity=30.1837270341207, Blast_Score=161, Evalue=8e-40, Organism=Drosophila melanogaster, GI24581954, Length=349, Percent_Identity=28.6532951289398, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24581952, Length=349, Percent_Identity=28.6532951289398, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24581956, Length=349, Percent_Identity=28.6532951289398, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI21355559, Length=359, Percent_Identity=31.7548746518106, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI24643725, Length=395, Percent_Identity=30.6329113924051, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI281365720, Length=305, Percent_Identity=32.4590163934426, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI20130173, Length=424, Percent_Identity=27.8301886792453, Blast_Score=148, Evalue=6e-36, Organism=Drosophila melanogaster, GI19920478, Length=356, Percent_Identity=30.8988764044944, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI17136666, Length=409, Percent_Identity=27.3838630806846, Blast_Score=124, Evalue=8e-29, Organism=Drosophila melanogaster, GI24668515, Length=338, Percent_Identity=27.5147928994083, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI28571338, Length=208, Percent_Identity=38.4615384615385, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI18859659, Length=208, Percent_Identity=38.4615384615385, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24640164, Length=345, Percent_Identity=25.2173913043478, Blast_Score=91, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 45533; Mature: 45401
Theoretical pI: Translated: 11.18; Mature: 11.18
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKADLLSLQLQPVFESALARAGVRALTPIQVAMIPPMLAARDLIATAQTGSGKTLAYA CCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCHHHHCCCHHHHHHHHHCCCCCCCCHHHHH LPLLQQRLQAPEQAPRVLGGLILVPTRELVAQVAHTLLSLAAALPRRLKIVAATGGEAIN HHHHHHHHCCHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCC PQLMALRGGADIVIATPGRLLDLVTHNALRLSQVSTLVLDEADRLLDLGFGAELDRILAL CEEEEEECCCEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LPAQRQSVLVSATFPAAIASLAKRRLRDPLRITLGGTPEQAPAIAQRAIAVDAGQRTQLL CCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHH RHLLLEHGWPQLLVFVTSRHGADKVAEKLSKTGIAALPLHGELSQGRRERTLRAFKQADV HHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCE QVLVATDLAGRGIDIDALPAVLNYDLPRSTVDYTHRIGRTARAGASGVAISFVTADSAQQ EEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCHHCCCCCCEEEEEEECCCHHH WRLIEKRQGLRVPTSVIEGFEPTPVQAPAPDHASGAAARAADDNGGIKGKRPSKKDKLRA HHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH AAQAQAGKPG HHHHCCCCCC >Mature Secondary Structure SLKADLLSLQLQPVFESALARAGVRALTPIQVAMIPPMLAARDLIATAQTGSGKTLAYA CCCCCHHHHHHHHHHHHHHHHCCCHHCCCCHHHHCCCHHHHHHHHHCCCCCCCCHHHHH LPLLQQRLQAPEQAPRVLGGLILVPTRELVAQVAHTLLSLAAALPRRLKIVAATGGEAIN HHHHHHHHCCHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCC PQLMALRGGADIVIATPGRLLDLVTHNALRLSQVSTLVLDEADRLLDLGFGAELDRILAL CEEEEEECCCEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LPAQRQSVLVSATFPAAIASLAKRRLRDPLRITLGGTPEQAPAIAQRAIAVDAGQRTQLL CCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHH RHLLLEHGWPQLLVFVTSRHGADKVAEKLSKTGIAALPLHGELSQGRRERTLRAFKQADV HHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCE QVLVATDLAGRGIDIDALPAVLNYDLPRSTVDYTHRIGRTARAGASGVAISFVTADSAQQ EEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCHHCCCCCCEEEEEEECCCHHH WRLIEKRQGLRVPTSVIEGFEPTPVQAPAPDHASGAAARAADDNGGIKGKRPSKKDKLRA HHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH AAQAQAGKPG HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]