| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is fabG [H]
Identifier: 66766771
GI number: 66766771
Start: 508175
End: 508933
Strand: Reverse
Name: fabG [H]
Synonym: XC_0429
Alternate gene names: 66766771
Gene position: 508933-508175 (Counterclockwise)
Preceding gene: 66766774
Following gene: 66766762
Centisome position: 9.88
GC content: 67.59
Gene sequence:
>759_bases ATGTCCACACCTCCCCCACAACCGCAACGCGTGCTGATCGCCGGCGGCAGCCGCGGGATCGGGCTGGCGATTGCGCAGGC CTTTGTCCAAAGCGGCGCGCAGGTTTCGCTGTGCGCACGCAATCCCGAAGGCCTGGCAAATGCCGCTGCCCAGCTCGCGG CGGACGGAGCGCCGGTGCATACGTTTGCCTGCGACCTGGCCGACGCCGCGCAGATCGAGCGCTATGTGCATGCCGCTGCG CAGGCGTTTGGCGGCCTGGACGTGGTGGTCAACAACGCCTCCGGCTACGGGCACGGCAATGACGACGAAAGCTGGCAAGC CGGCCTGGATGTCGACCTGATGGCCGCGGTGCGCTGCAACCGCGCCGCAGTGCCGTATCTGCGCCAGAGTGGCAATGCGG TGATTCTCAACATCAGCTCGATCAACGGCCAGCGCCCCACCCCGCGCGCGATCGCCTATTCCACCGCCAAGGCCGCGCTC AACTACTACACCACCACGCTGGCCGCCGAGCTGGCGCGCGAACGTATCCGCGTCAACGCGATCGCACCCGGCTCGATCGA ATTCCCCGGCGGGCTGTGGGAACAACGCAGCCGCGACGAACCGGCGTTGTATGCACGCATCCGCGACAGCATTCCGTTCG GCGGCTTCGGGCAGGTGCAGCATATTGCCGACGCCGCGCTATTCCTGGCCTCGCCACAGGCACGCTGGATCACAGGGCAG GTGCTGGCAGTGGATGGCGGGCAGTCGCTGGGGGTGTGA
Upstream 100 bases:
>100_bases GAATCACTCCGCGCGGTTGCTGCCGGCCGCAGTGGCGTAAGTGCATAGTGGCTGGCAGGGCGGTGATCGATAATGCGGCT TTACCAATGCGAGTGTCGCC
Downstream 100 bases:
>100_bases GGGCGTGGTGTGTGGCTGCGTGTTTCGAGCCACGTGTGTTTGATGGCCTGGTAGGACGTCCCGATGAGGCGTTACCGGTG ATGCCTCATCGCGCGCAAGC
Product: 3-oxoacyl-[ACP] reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSTPPPQPQRVLIAGGSRGIGLAIAQAFVQSGAQVSLCARNPEGLANAAAQLAADGAPVHTFACDLADAAQIERYVHAAA QAFGGLDVVVNNASGYGHGNDDESWQAGLDVDLMAAVRCNRAAVPYLRQSGNAVILNISSINGQRPTPRAIAYSTAKAAL NYYTTTLAAELARERIRVNAIAPGSIEFPGGLWEQRSRDEPALYARIRDSIPFGGFGQVQHIADAALFLASPQARWITGQ VLAVDGGQSLGV
Sequences:
>Translated_252_residues MSTPPPQPQRVLIAGGSRGIGLAIAQAFVQSGAQVSLCARNPEGLANAAAQLAADGAPVHTFACDLADAAQIERYVHAAA QAFGGLDVVVNNASGYGHGNDDESWQAGLDVDLMAAVRCNRAAVPYLRQSGNAVILNISSINGQRPTPRAIAYSTAKAAL NYYTTTLAAELARERIRVNAIAPGSIEFPGGLWEQRSRDEPALYARIRDSIPFGGFGQVQHIADAALFLASPQARWITGQ VLAVDGGQSLGV >Mature_251_residues STPPPQPQRVLIAGGSRGIGLAIAQAFVQSGAQVSLCARNPEGLANAAAQLAADGAPVHTFACDLADAAQIERYVHAAAQ AFGGLDVVVNNASGYGHGNDDESWQAGLDVDLMAAVRCNRAAVPYLRQSGNAVILNISSINGQRPTPRAIAYSTAKAALN YYTTTLAAELARERIRVNAIAPGSIEFPGGLWEQRSRDEPALYARIRDSIPFGGFGQVQHIADAALFLASPQARWITGQV LAVDGGQSLGV
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=255, Percent_Identity=32.5490196078431, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI40254992, Length=245, Percent_Identity=32.2448979591837, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI59889578, Length=235, Percent_Identity=34.8936170212766, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI126723750, Length=258, Percent_Identity=27.5193798449612, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI5031737, Length=240, Percent_Identity=29.5833333333333, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI19923817, Length=259, Percent_Identity=27.7992277992278, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI10190704, Length=244, Percent_Identity=29.9180327868852, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI7705925, Length=244, Percent_Identity=29.9180327868852, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI126723191, Length=187, Percent_Identity=32.620320855615, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI31542939, Length=209, Percent_Identity=29.6650717703349, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI33667109, Length=181, Percent_Identity=32.5966850828729, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI109715829, Length=249, Percent_Identity=28.5140562248996, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI4503301, Length=227, Percent_Identity=27.7533039647577, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI40254986, Length=188, Percent_Identity=34.0425531914894, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI32455239, Length=178, Percent_Identity=28.6516853932584, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI5031765, Length=178, Percent_Identity=28.6516853932584, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI224922801, Length=162, Percent_Identity=29.6296296296296, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI66933014, Length=201, Percent_Identity=26.865671641791, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI20149619, Length=187, Percent_Identity=28.3422459893048, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI15277342, Length=255, Percent_Identity=28.6274509803922, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI142976729, Length=184, Percent_Identity=27.1739130434783, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4504503, Length=220, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=7e-12, Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=33.1967213114754, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1788459, Length=248, Percent_Identity=31.0483870967742, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787905, Length=239, Percent_Identity=29.7071129707113, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87082100, Length=249, Percent_Identity=28.9156626506024, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=28.8, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=31.7647058823529, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1789378, Length=254, Percent_Identity=29.1338582677165, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1790717, Length=249, Percent_Identity=26.5060240963855, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=29.1497975708502, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1789208, Length=242, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=31.1475409836066, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787820, Length=181, Percent_Identity=26.5193370165746, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787891, Length=259, Percent_Identity=27.7992277992278, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17559104, Length=256, Percent_Identity=35.15625, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17560676, Length=258, Percent_Identity=31.0077519379845, Blast_Score=120, Evalue=9e-28, Organism=Caenorhabditis elegans, GI17562904, Length=264, Percent_Identity=32.1969696969697, Blast_Score=117, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17563726, Length=260, Percent_Identity=33.8461538461538, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=31.2, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=31.3253012048193, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17562990, Length=257, Percent_Identity=31.1284046692607, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=30.3846153846154, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17562906, Length=259, Percent_Identity=31.2741312741313, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17531453, Length=259, Percent_Identity=30.1158301158301, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17560332, Length=261, Percent_Identity=31.8007662835249, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17562908, Length=262, Percent_Identity=30.1526717557252, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI72000259, Length=260, Percent_Identity=30.7692307692308, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17560220, Length=258, Percent_Identity=30.2325581395349, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI193204405, Length=260, Percent_Identity=30, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25147288, Length=248, Percent_Identity=30.6451612903226, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=28.957528957529, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17561402, Length=245, Percent_Identity=29.7959183673469, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=29.0076335877863, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17551412, Length=259, Percent_Identity=28.957528957529, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17508651, Length=246, Percent_Identity=27.6422764227642, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17561272, Length=241, Percent_Identity=27.8008298755187, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17565030, Length=259, Percent_Identity=28.1853281853282, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=28.8617886178862, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17544670, Length=260, Percent_Identity=26.5384615384615, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17536025, Length=251, Percent_Identity=25.4980079681275, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17538486, Length=257, Percent_Identity=29.1828793774319, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17555706, Length=245, Percent_Identity=28.1632653061224, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17567345, Length=185, Percent_Identity=27.027027027027, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=25.0980392156863, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71982365, Length=190, Percent_Identity=27.8947368421053, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6323882, Length=245, Percent_Identity=27.7551020408163, Blast_Score=88, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6324126, Length=247, Percent_Identity=29.1497975708502, Blast_Score=85, Evalue=9e-18, Organism=Saccharomyces cerevisiae, GI6322227, Length=191, Percent_Identity=28.7958115183246, Blast_Score=72, Evalue=7e-14, Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=7e-28, Organism=Drosophila melanogaster, GI21355319, Length=245, Percent_Identity=31.8367346938775, Blast_Score=117, Evalue=9e-27, Organism=Drosophila melanogaster, GI24644339, Length=249, Percent_Identity=33.3333333333333, Blast_Score=107, Evalue=6e-24, Organism=Drosophila melanogaster, GI21357041, Length=255, Percent_Identity=31.3725490196078, Blast_Score=107, Evalue=6e-24, Organism=Drosophila melanogaster, GI28571526, Length=256, Percent_Identity=31.640625, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI21357673, Length=251, Percent_Identity=27.8884462151394, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24644337, Length=248, Percent_Identity=31.4516129032258, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=28.4552845528455, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI21358495, Length=185, Percent_Identity=30.2702702702703, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24639444, Length=251, Percent_Identity=25.8964143426295, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24580925, Length=198, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26317; Mature: 26186
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPPPQPQRVLIAGGSRGIGLAIAQAFVQSGAQVSLCARNPEGLANAAAQLAADGAPVH CCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCE TFACDLADAAQIERYVHAAAQAFGGLDVVVNNASGYGHGNDDESWQAGLDVDLMAAVRCN EEECCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHCCCCHHHHHHHHCC RAAVPYLRQSGNAVILNISSINGQRPTPRAIAYSTAKAALNYYTTTLAAELARERIRVNA CCCCCHHHCCCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHEEEEE IAPGSIEFPGGLWEQRSRDEPALYARIRDSIPFGGFGQVQHIADAALFLASPQARWITGQ ECCCCEECCCCCHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE VLAVDGGQSLGV EEEEECCCCCCC >Mature Secondary Structure STPPPQPQRVLIAGGSRGIGLAIAQAFVQSGAQVSLCARNPEGLANAAAQLAADGAPVH CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCE TFACDLADAAQIERYVHAAAQAFGGLDVVVNNASGYGHGNDDESWQAGLDVDLMAAVRCN EEECCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHCCCCHHHHHHHHCC RAAVPYLRQSGNAVILNISSINGQRPTPRAIAYSTAKAALNYYTTTLAAELARERIRVNA CCCCCHHHCCCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHEEEEE IAPGSIEFPGGLWEQRSRDEPALYARIRDSIPFGGFGQVQHIADAALFLASPQARWITGQ ECCCCEECCCCCHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE VLAVDGGQSLGV EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]