| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is 66766693
Identifier: 66766693
GI number: 66766693
Start: 409363
End: 409809
Strand: Reverse
Name: 66766693
Synonym: XC_0350
Alternate gene names: NA
Gene position: 409809-409363 (Counterclockwise)
Preceding gene: 66766694
Following gene: 66766690
Centisome position: 7.96
GC content: 63.53
Gene sequence:
>447_bases GTGGAAGGCCCAACTAACAAGCTCCTCATCGTCGGCGGCGCACTGAGTGGCGTTGCAGCACTGACACATCTTGCGTGCTT GGTAGTGGGCGCGCCGCTCTTCCGCCTCTTGGGCGCCGGAGAGCAGATGGCGCAACTTCACGCTGAAGGCGGCTGGTACC CCACAGTGGTCACGCTCGCGATCGCCACCGTCTTGGCCACCTGGGGTGCGTACGCACTCTCGGCCGCGGGCGTATTCCGG CCGTTTCCGCTACGTCGAACAGTCCTTACAGCGGTCACAGGTGTTTATATCCTTCGCGGTGTGGCGTTCGTCCCGGTCAT GACCTACTTCCCTGGCAACAGCCTCACGTTCTGGGTCGTGAGCTCGGCGATCTGTCTCGCCATTGGTCTGGTGCACCTTG TGGGGCTCCGACAGTCGTGGGGCAGGCTGCGTCGGCTTGGGGCCTAA
Upstream 100 bases:
>100_bases AGGCGTCGGGGTTGCGAGCGCATCTGCCTAACAGTTCATTCAAGCCGACGCCGCTTCGCGGCGCGGCTTAATTCAGACGT TAGGCCGCAAGGGAGATCGC
Downstream 100 bases:
>100_bases CAATTCATTCAAGCCGAAACCGCTACCCGGTTCGGCTTAATTTCGTCGTTAGGCCGTGGTGGAGCAAATGCGTTGGTGGT TACCGCTTCGGTGAGTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MEGPTNKLLIVGGALSGVAALTHLACLVVGAPLFRLLGAGEQMAQLHAEGGWYPTVVTLAIATVLATWGAYALSAAGVFR PFPLRRTVLTAVTGVYILRGVAFVPVMTYFPGNSLTFWVVSSAICLAIGLVHLVGLRQSWGRLRRLGA
Sequences:
>Translated_148_residues MEGPTNKLLIVGGALSGVAALTHLACLVVGAPLFRLLGAGEQMAQLHAEGGWYPTVVTLAIATVLATWGAYALSAAGVFR PFPLRRTVLTAVTGVYILRGVAFVPVMTYFPGNSLTFWVVSSAICLAIGLVHLVGLRQSWGRLRRLGA >Mature_148_residues MEGPTNKLLIVGGALSGVAALTHLACLVVGAPLFRLLGAGEQMAQLHAEGGWYPTVVTLAIATVLATWGAYALSAAGVFR PFPLRRTVLTAVTGVYILRGVAFVPVMTYFPGNSLTFWVVSSAICLAIGLVHLVGLRQSWGRLRRLGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15560; Mature: 15560
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGPTNKLLIVGGALSGVAALTHLACLVVGAPLFRLLGAGEQMAQLHAEGGWYPTVVTLA CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH IATVLATWGAYALSAAGVFRPFPLRRTVLTAVTGVYILRGVAFVPVMTYFPGNSLTFWVV HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH SSAICLAIGLVHLVGLRQSWGRLRRLGA HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEGPTNKLLIVGGALSGVAALTHLACLVVGAPLFRLLGAGEQMAQLHAEGGWYPTVVTLA CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH IATVLATWGAYALSAAGVFRPFPLRRTVLTAVTGVYILRGVAFVPVMTYFPGNSLTFWVV HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH SSAICLAIGLVHLVGLRQSWGRLRRLGA HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA