| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66766687
Identifier: 66766687
GI number: 66766687
Start: 403723
End: 404658
Strand: Reverse
Name: 66766687
Synonym: XC_0344
Alternate gene names: NA
Gene position: 404658-403723 (Counterclockwise)
Preceding gene: 66766689
Following gene: 66766686
Centisome position: 7.86
GC content: 57.8
Gene sequence:
>936_bases TTGCAGTTGGCTTCGGTGGCGTCACGCGCCACTGCTTCGCTGGGGCAAGTTCCATCCCGCAAGCTGTGGCACACTCTGCC CAGGCGGCAGTGCTGGGGAGCATGGTTGCATCATCCAACCTTTGCGGCCACTCACTGCCTAACAACTCATTCAAGCCGAA GTTGCTTCGCAACTCGGCTTAATTCAAGCATTAGACCGCAGTACAGAATCCCCGTATCGTCCCTCCGCATGGGCCTTCTT TACACTCAGCAGTGGCATTCATATCTTTGGAGGCATCAGTTGTTCGACTTCAGTCCTGTTTCGAATCTCGTCTTTGCCCT TGGGCGCAACGGGCCAGGGGGCGTTCAGCTTTTGGGCACTGCATTTGCTTTAGACAAGCCCGGTCTCTTCGCGACAGCGT CGCACGTGGCGGGGACGGAGGGACAGAACCTTGTCCTCGCCTTCAAGCCGCTCGCAGCACTGCACGACTATCAAGACACC GGAGACACCTCCATCAGGTCGTTTCCTGTGCAGATCCACGCCCTTGACCCGTTTCATGACCTCGCCGTCCTTAAGGCAGA TGTAATCTCTACGTCGAGTGTGGTGGTAGGTGGCGCAGATGACGCAACGGTGGGTACGCAGGTCGCCAGTTTTGGTTTCC CACACGCGGATCACTGCCGAATGGTTCTTACGCAACAAGACGCTGAGATTGGGGCGCGAGTTCTAATCGCATCCGGCGGC ATCAAGGCAAAACACCTGGTCCTAAATACTCAGGCACGCCCTGGGCAGTCTGGCAGTCCGATCTTCAGAAAGACTGATGG TCGGCTGGTAGGGGTGCTCGTCGGCTCCTATGCCCCCGGGGGCGGCGGCGGCATATCGTTGGGGGGAGTCGACCCGCACA CTCTTCATCAGACGACGCACGCGGTATCGTCGGAGTACCTTTCTAAGATGTACTAG
Upstream 100 bases:
>100_bases GCAGGTGTGCATGCGGTTGGCTCCGGACAGCAGTCATCACCGTTGCTGGTTGCGGTAAGTCGGTGCTTCGCCTTGGTACG TCGTTCCCGCGCTGCGCTCG
Downstream 100 bases:
>100_bases CTATGACGGACACCATCGACACATTGCTGCAAGACGACCCGGACAAATGGGTCGGTGAGCTTCCAGAGTTCCAGCGCTCC GCTATCCAGGAGTTGCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MQLASVASRATASLGQVPSRKLWHTLPRRQCWGAWLHHPTFAATHCLTTHSSRSCFATRLNSSIRPQYRIPVSSLRMGLL YTQQWHSYLWRHQLFDFSPVSNLVFALGRNGPGGVQLLGTAFALDKPGLFATASHVAGTEGQNLVLAFKPLAALHDYQDT GDTSIRSFPVQIHALDPFHDLAVLKADVISTSSVVVGGADDATVGTQVASFGFPHADHCRMVLTQQDAEIGARVLIASGG IKAKHLVLNTQARPGQSGSPIFRKTDGRLVGVLVGSYAPGGGGGISLGGVDPHTLHQTTHAVSSEYLSKMY
Sequences:
>Translated_311_residues MQLASVASRATASLGQVPSRKLWHTLPRRQCWGAWLHHPTFAATHCLTTHSSRSCFATRLNSSIRPQYRIPVSSLRMGLL YTQQWHSYLWRHQLFDFSPVSNLVFALGRNGPGGVQLLGTAFALDKPGLFATASHVAGTEGQNLVLAFKPLAALHDYQDT GDTSIRSFPVQIHALDPFHDLAVLKADVISTSSVVVGGADDATVGTQVASFGFPHADHCRMVLTQQDAEIGARVLIASGG IKAKHLVLNTQARPGQSGSPIFRKTDGRLVGVLVGSYAPGGGGGISLGGVDPHTLHQTTHAVSSEYLSKMY >Mature_311_residues MQLASVASRATASLGQVPSRKLWHTLPRRQCWGAWLHHPTFAATHCLTTHSSRSCFATRLNSSIRPQYRIPVSSLRMGLL YTQQWHSYLWRHQLFDFSPVSNLVFALGRNGPGGVQLLGTAFALDKPGLFATASHVAGTEGQNLVLAFKPLAALHDYQDT GDTSIRSFPVQIHALDPFHDLAVLKADVISTSSVVVGGADDATVGTQVASFGFPHADHCRMVLTQQDAEIGARVLIASGG IKAKHLVLNTQARPGQSGSPIFRKTDGRLVGVLVGSYAPGGGGGISLGGVDPHTLHQTTHAVSSEYLSKMY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33335; Mature: 33335
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLASVASRATASLGQVPSRKLWHTLPRRQCWGAWLHHPTFAATHCLTTHSSRSCFATRL CCHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCCHHHHHHEECCCCCHHHHHHH NSSIRPQYRIPVSSLRMGLLYTQQWHSYLWRHQLFDFSPVSNLVFALGRNGPGGVQLLGT CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEE AFALDKPGLFATASHVAGTEGQNLVLAFKPLAALHDYQDTGDTSIRSFPVQIHALDPFHD EEECCCCCCEEEHHHHCCCCCCEEEEEECCHHHHHCCCCCCCCCEEEEEEEEEEECCHHH LAVLKADVISTSSVVVGGADDATVGTQVASFGFPHADHCRMVLTQQDAEIGARVLIASGG HHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEECCC IKAKHLVLNTQARPGQSGSPIFRKTDGRLVGVLVGSYAPGGGGGISLGGVDPHTLHQTTH CEEEEEEEECCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCEEECCCCHHHHHHHHH AVSSEYLSKMY HHHHHHHHHCC >Mature Secondary Structure MQLASVASRATASLGQVPSRKLWHTLPRRQCWGAWLHHPTFAATHCLTTHSSRSCFATRL CCHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCCHHHHHHEECCCCCHHHHHHH NSSIRPQYRIPVSSLRMGLLYTQQWHSYLWRHQLFDFSPVSNLVFALGRNGPGGVQLLGT CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEE AFALDKPGLFATASHVAGTEGQNLVLAFKPLAALHDYQDTGDTSIRSFPVQIHALDPFHD EEECCCCCCEEEHHHHCCCCCCEEEEEECCHHHHHCCCCCCCCCEEEEEEEEEEECCHHH LAVLKADVISTSSVVVGGADDATVGTQVASFGFPHADHCRMVLTQQDAEIGARVLIASGG HHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEECCC IKAKHLVLNTQARPGQSGSPIFRKTDGRLVGVLVGSYAPGGGGGISLGGVDPHTLHQTTH CEEEEEEEECCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCEEECCCCHHHHHHHHH AVSSEYLSKMY HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA