| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is 66766675
Identifier: 66766675
GI number: 66766675
Start: 392398
End: 393837
Strand: Reverse
Name: 66766675
Synonym: XC_0332
Alternate gene names: NA
Gene position: 393837-392398 (Counterclockwise)
Preceding gene: 66766676
Following gene: 66766670
Centisome position: 7.65
GC content: 66.25
Gene sequence:
>1440_bases ATGAAAAAACGCAATCTCGCCACCGTCCTGTGCGCCCTCAGCGCGACCGCCAGCGGCAGCACGCTGGCCGCCGAGCTGGA GCTGTACGTCGACCGCAAGACCAAGCAGATCTTTGCCGAGCCAGCACCCGGGCGCGACAAGCTGGGCAAGTTCGTGCAGG TGGACGAGAACGGCAAGCTGCCGGCATCCGCCTTGCCTGAAGCGCCCGCGGCACCAGTCACGGCCACCGCGCCCAGCACC GGCGTGGCCCAGGCAGCGCCGCCTGCTCCGGCGGCCGCGCCCGTGCCGACCGCCGCCAGCGACGCGCCCAAGAAGTGGTA CGACAAGTTGAGCCTGCGCGGCTACACCCAGATCCGCTACAACCAGGGCATCGGTGGCGATGCGCAGGACCTGCGTGCGC CCGGCGACCGCTTCATCGGCAATGACCAGAGCCTGGGCATCCGCCGTGCACGCCTGGTGCTGAGCGGCGATCTCAACGAG CACGTGTCGCTGTACTTCCAGCCCGATTTCGCCAGCACCCCGACAGGTTCGACCACCTCCAACTTCGCGCAGCTGCGCGA TGCCTACGCCGACATCTTCTTCGACAAGAAGCGCGAATACCGCGTGCGCGTGGGCCAGTCGAAGATGCCCTACGGCTGGG AAAACCTGCAGTCCAGCCAGAACCGCTTGACGCTGGACCGAGCCGACGCGCTCAATTCCGGCCTGCGCGACGAACGCGAC ATCGGCGCGGTGTTCTACTACAGCCCCACGGTGGCCAAGGGACGCTTCCAGGACCTGGTCAAATCCGGCCTGAAGGGCTC GGGCGACTACGGCGTGCTCGGTGCCGGTGTGTACAACGGCCAGGGCGCCAACCGCGCCGAGCGCAACGACGGCATGCATG CGGTGGTGCACGCCACCTACCCGTTCAAGCTCGCCAACGGCCAGTACCTGGAAGTGGGCGCCGATGCCTACGCCGGCAAG TTCGTGCCGACGGCGGCAGCGGTGAACATCGGTGGCCGCAGCTTCACCCCGACCATCACCGAGCCGAACGGCTACACCGA TCAACGCGTGGCCGCGCACATCATCTATTACCCGCAGCCGTTTGGCCTGCAGGCCGAGTGGACCGTGGGCCGCGGCCCGG AGCTGGACGTGGCGCAGCGGCGTATCCGCACGCGTTCGTTGAGCGGCGGTTACGTGCAGGCGATGTTCAAGCACGACTTC AACTACGGCACGCTGCTGCCTTACCTCAAGTGGCAGACCTACCGTGGCGGTTCCAAGTTCGATACCAATGCGCCGCGCAT GCGCCTGGACGAAGTGGAAGCCGGCGTCGAATGGCAGCCGATGGATGCGCTGGAACTGGTCTTCGCCTATTCGAAGATGA AGCGCACCGACGTCACCACTGCGCCGTATCCGGTAGTCGAAGGCGATCTGCTGCGGCTGCAGCTGCAGGTCAATTACTGA
Upstream 100 bases:
>100_bases CCATGACGGTGCCCGGCATCTGGCCGCACGCGCCCTTCTTGCAGGAGCGCCTGGGCCGGCCACGCCACCGCCGCCCAGTT CCCCTTGCCGAGCCGGATCC
Downstream 100 bases:
>100_bases TTCACTGAGCTGATGTAACTACCCTGAACCTGGTACTACGGAAGTTCCCTGTTTTGGTGGCATTGCGTGTAAGACATCGA GTTGCGCGGTCGCGCGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphate-Selective Porin
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MKKRNLATVLCALSATASGSTLAAELELYVDRKTKQIFAEPAPGRDKLGKFVQVDENGKLPASALPEAPAAPVTATAPST GVAQAAPPAPAAAPVPTAASDAPKKWYDKLSLRGYTQIRYNQGIGGDAQDLRAPGDRFIGNDQSLGIRRARLVLSGDLNE HVSLYFQPDFASTPTGSTTSNFAQLRDAYADIFFDKKREYRVRVGQSKMPYGWENLQSSQNRLTLDRADALNSGLRDERD IGAVFYYSPTVAKGRFQDLVKSGLKGSGDYGVLGAGVYNGQGANRAERNDGMHAVVHATYPFKLANGQYLEVGADAYAGK FVPTAAAVNIGGRSFTPTITEPNGYTDQRVAAHIIYYPQPFGLQAEWTVGRGPELDVAQRRIRTRSLSGGYVQAMFKHDF NYGTLLPYLKWQTYRGGSKFDTNAPRMRLDEVEAGVEWQPMDALELVFAYSKMKRTDVTTAPYPVVEGDLLRLQLQVNY
Sequences:
>Translated_479_residues MKKRNLATVLCALSATASGSTLAAELELYVDRKTKQIFAEPAPGRDKLGKFVQVDENGKLPASALPEAPAAPVTATAPST GVAQAAPPAPAAAPVPTAASDAPKKWYDKLSLRGYTQIRYNQGIGGDAQDLRAPGDRFIGNDQSLGIRRARLVLSGDLNE HVSLYFQPDFASTPTGSTTSNFAQLRDAYADIFFDKKREYRVRVGQSKMPYGWENLQSSQNRLTLDRADALNSGLRDERD IGAVFYYSPTVAKGRFQDLVKSGLKGSGDYGVLGAGVYNGQGANRAERNDGMHAVVHATYPFKLANGQYLEVGADAYAGK FVPTAAAVNIGGRSFTPTITEPNGYTDQRVAAHIIYYPQPFGLQAEWTVGRGPELDVAQRRIRTRSLSGGYVQAMFKHDF NYGTLLPYLKWQTYRGGSKFDTNAPRMRLDEVEAGVEWQPMDALELVFAYSKMKRTDVTTAPYPVVEGDLLRLQLQVNY >Mature_479_residues MKKRNLATVLCALSATASGSTLAAELELYVDRKTKQIFAEPAPGRDKLGKFVQVDENGKLPASALPEAPAAPVTATAPST GVAQAAPPAPAAAPVPTAASDAPKKWYDKLSLRGYTQIRYNQGIGGDAQDLRAPGDRFIGNDQSLGIRRARLVLSGDLNE HVSLYFQPDFASTPTGSTTSNFAQLRDAYADIFFDKKREYRVRVGQSKMPYGWENLQSSQNRLTLDRADALNSGLRDERD IGAVFYYSPTVAKGRFQDLVKSGLKGSGDYGVLGAGVYNGQGANRAERNDGMHAVVHATYPFKLANGQYLEVGADAYAGK FVPTAAAVNIGGRSFTPTITEPNGYTDQRVAAHIIYYPQPFGLQAEWTVGRGPELDVAQRRIRTRSLSGGYVQAMFKHDF NYGTLLPYLKWQTYRGGSKFDTNAPRMRLDEVEAGVEWQPMDALELVFAYSKMKRTDVTTAPYPVVEGDLLRLQLQVNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52347; Mature: 52347
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRNLATVLCALSATASGSTLAAELELYVDRKTKQIFAEPAPGRDKLGKFVQVDENGKL CCCCHHHHEEEEHHCCCCCCEEEEEEEEEEECCCHHHCCCCCCCHHHCCCEEEECCCCCC PASALPEAPAAPVTATAPSTGVAQAAPPAPAAAPVPTAASDAPKKWYDKLSLRGYTQIRY CHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEE NQGIGGDAQDLRAPGDRFIGNDQSLGIRRARLVLSGDLNEHVSLYFQPDFASTPTGSTTS CCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHH NFAQLRDAYADIFFDKKREYRVRVGQSKMPYGWENLQSSQNRLTLDRADALNSGLRDERD HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCCEEEEEHHHHHHCCCCCCCC IGAVFYYSPTVAKGRFQDLVKSGLKGSGDYGVLGAGVYNGQGANRAERNDGMHAVVHATY CCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEECCEECCCCCCCCHHCCCCEEEEEEEC PFKLANGQYLEVGADAYAGKFVPTAAAVNIGGRSFTPTITEPNGYTDQRVAAHIIYYPQP CEEECCCCEEEECCCHHCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCEEEEEEEECCC FGLQAEWTVGRGPELDVAQRRIRTRSLSGGYVQAMFKHDFNYGTLLPYLKWQTYRGGSKF CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEHHHCCCCCCCCCCCEEEEEECCCCCC DTNAPRMRLDEVEAGVEWQPMDALELVFAYSKMKRTDVTTAPYPVVEGDLLRLQLQVNY CCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MKKRNLATVLCALSATASGSTLAAELELYVDRKTKQIFAEPAPGRDKLGKFVQVDENGKL CCCCHHHHEEEEHHCCCCCCEEEEEEEEEEECCCHHHCCCCCCCHHHCCCEEEECCCCCC PASALPEAPAAPVTATAPSTGVAQAAPPAPAAAPVPTAASDAPKKWYDKLSLRGYTQIRY CHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEE NQGIGGDAQDLRAPGDRFIGNDQSLGIRRARLVLSGDLNEHVSLYFQPDFASTPTGSTTS CCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHH NFAQLRDAYADIFFDKKREYRVRVGQSKMPYGWENLQSSQNRLTLDRADALNSGLRDERD HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCCEEEEEHHHHHHCCCCCCCC IGAVFYYSPTVAKGRFQDLVKSGLKGSGDYGVLGAGVYNGQGANRAERNDGMHAVVHATY CCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEECCEECCCCCCCCHHCCCCEEEEEEEC PFKLANGQYLEVGADAYAGKFVPTAAAVNIGGRSFTPTITEPNGYTDQRVAAHIIYYPQP CEEECCCCEEEECCCHHCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCEEEEEEEECCC FGLQAEWTVGRGPELDVAQRRIRTRSLSGGYVQAMFKHDFNYGTLLPYLKWQTYRGGSKF CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEHHHCCCCCCCCCCCEEEEEECCCCCC DTNAPRMRLDEVEAGVEWQPMDALELVFAYSKMKRTDVTTAPYPVVEGDLLRLQLQVNY CCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA