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The map label for this gene is ycaK [C]

Identifier: 66766410

GI number: 66766410

Start: 75551

End: 76069

Strand: Reverse

Name: ycaK [C]

Synonym: XC_0060

Alternate gene names: 66766410

Gene position: 76069-75551 (Counterclockwise)

Preceding gene: 66766411

Following gene: 66766409

Centisome position: 1.48

GC content: 63.58

Gene sequence:

>519_bases
TTGGCCTCGGGTGGGGCCCATACCTTTGAAGTAGCTGACCTGGCAAAGGAAGGCTTCGATCCGCGCTTCAACCAGGCCGA
CATTGCGCTGTATTCCCGGCGGGCCGGTCCTGCGCCGGATGTGGCGGCCGAACATGCGCGGCTGGATCGTGCCGATGCGG
TGGTCCTGGTGTTCCCGATTTATTGGTGGGGCATGCCGGCGCTACTCAAGGGCTGGATCGACCGGGTGTTTACGCTGGGC
TGGGCGTTCGATGAAGACGCCGACAGCGGCAGGATCGTCAAGAAGCTGGGGCGGTTGGACGTACATCTGGTGGCCATTGG
CGGTGCGGACGAGCGCACCTATGCGCGGCATGGCTACTTCGGTGCGATGAAGACGCAGATCAACCACGGCATCTTCGACT
TCTGCGGTGCACCGGTGCGCACTGCCGAACTGCTGTTGTTGCCGGATGCCGAGTTTCCGGAGTCGCACTACGCCACAGCG
CGCGCGGTGGGTGAGCAGGTGTTTGCCGCCAAGGCGTAA

Upstream 100 bases:

>100_bases
AATTGGAGTTACCCAGCCTATGCATGCCCTTATCGTTGTCGCACACCCCGAGCAGCGCTCGCACACCCACGCGGTGGCGG
CGCAGATTGGCGAGGCGCTG

Downstream 100 bases:

>100_bases
ACCGTGCCGACGTGGGCTTCGGCGTGCTCGATCGCCTGCGTGCGGAGATGCTGCGCCGGGTGGGATTGGGCGATCTGTTG
GCACCGCGCGTGGTGGGCTG

Product: NAD(P)H oxidoreductase

Products: NA

Alternate protein names: NAD(P)H Oxidoreductase; Ribosyldihydronicotinamide Dehydrogenase; NAD(P)H Dehydrogenase Protein; Quinone Reductase; Oxidoreductase; NAD(P)H Quinone Oxidoreductase; NADPH-Quinone Reductase; Oxidoreductase Protein; NADH Dehydrogenase; NAD(P)H Dehydrogenase Quinone Family; Flavodoxin; Flavodoxin-Like Fold Family Protein; Quinone Family NAD(P)H Dehydrogenase; NADPH-Dependent FMN Reductase Family; NAD(P)H Dehydrogenase Quinone Family Protein; NAD(P)H Oxidoreductase YcaK; NADPH-Quinone Reductase YabF Family

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MASGGAHTFEVADLAKEGFDPRFNQADIALYSRRAGPAPDVAAEHARLDRADAVVLVFPIYWWGMPALLKGWIDRVFTLG
WAFDEDADSGRIVKKLGRLDVHLVAIGGADERTYARHGYFGAMKTQINHGIFDFCGAPVRTAELLLLPDAEFPESHYATA
RAVGEQVFAAKA

Sequences:

>Translated_172_residues
MASGGAHTFEVADLAKEGFDPRFNQADIALYSRRAGPAPDVAAEHARLDRADAVVLVFPIYWWGMPALLKGWIDRVFTLG
WAFDEDADSGRIVKKLGRLDVHLVAIGGADERTYARHGYFGAMKTQINHGIFDFCGAPVRTAELLLLPDAEFPESHYATA
RAVGEQVFAAKA
>Mature_171_residues
ASGGAHTFEVADLAKEGFDPRFNQADIALYSRRAGPAPDVAAEHARLDRADAVVLVFPIYWWGMPALLKGWIDRVFTLGW
AFDEDADSGRIVKKLGRLDVHLVAIGGADERTYARHGYFGAMKTQINHGIFDFCGAPVRTAELLLLPDAEFPESHYATAR
AVGEQVFAAKA

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI156564357, Length=164, Percent_Identity=32.3170731707317, Blast_Score=76, Evalue=1e-14,
Organism=Homo sapiens, GI4505415, Length=154, Percent_Identity=30.5194805194805, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.99.- [C]

Molecular weight: Translated: 18818; Mature: 18687

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGGAHTFEVADLAKEGFDPRFNQADIALYSRRAGPAPDVAAEHARLDRADAVVLVFPI
CCCCCCCCHHHHHHHHHCCCCCCCCCHHEEEECCCCCCCCHHHHHHHCCCCCEEEEEECH
YWWGMPALLKGWIDRVFTLGWAFDEDADSGRIVKKLGRLDVHLVAIGGADERTYARHGYF
HHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCHHHHCCCC
GAMKTQINHGIFDFCGAPVRTAELLLLPDAEFPESHYATARAVGEQVFAAKA
HHHHHHHCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASGGAHTFEVADLAKEGFDPRFNQADIALYSRRAGPAPDVAAEHARLDRADAVVLVFPI
CCCCCCCHHHHHHHHHCCCCCCCCCHHEEEECCCCCCCCHHHHHHHCCCCCEEEEEECH
YWWGMPALLKGWIDRVFTLGWAFDEDADSGRIVKKLGRLDVHLVAIGGADERTYARHGYF
HHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCHHHHCCCC
GAMKTQINHGIFDFCGAPVRTAELLLLPDAEFPESHYATARAVGEQVFAAKA
HHHHHHHCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA