| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66766399
Identifier: 66766399
GI number: 66766399
Start: 60083
End: 60871
Strand: Reverse
Name: 66766399
Synonym: XC_0049
Alternate gene names: NA
Gene position: 60871-60083 (Counterclockwise)
Preceding gene: 77761060
Following gene: 66766394
Centisome position: 1.18
GC content: 67.3
Gene sequence:
>789_bases ATGTCGTCATGTCTGGATACCACCTTCAGCCGCCGTCGCCTGCTCACCGGCGCCGCCGGCGCCTCGTTGCTGGCAACCGC ACTACCCTCGCTTGCCGGTGCAGCGCCGCCTGCGGATGTGGGCCGCAAGTTCCTGCGCTCCAGGCGGCCGATGCCGTTTG CCGGCAACACGTTTGTCGGCCATCTCGAGCAGCAGGGCGATGGCTACGCCAGCTTCGACCGGGTGCTGGACATCTACCGC GAGCTGCCCGAGCACGGCTTTGCCAACAAGCTCGCCGTGCTGCCGCCCAGCAGCTATCACGTGACCTTGCTGGGCGGGGT CAATGAAACCGACCGCGCGCACGGGCCGTGGCCGAGCGATCTGGCGCGCGATGCTGCGCTGGCCGACATCAACGCCAGCT TCCTGTCGCGGTTGCAGCAGCGCAACACCACGCCGCTGGGGGCGTGCCGGTTTGTGGTCGACCCCACCGCGGCCATGACC GGCAGCAACGACAATCTGCTGATTCCGTTGCTGCCTGCCGATGCGGCCACCGCGCAGCGGCTGGAGACGGCGCGCAAGGG CCTGATGGCGCTGACGCTGCTGCAGCGCCCGGACTACAGCCACTACCGGTTCCACATCTCGCTGGCCTATCTGTGCGAAA CGCTCGATGCCGACGAACAGGCGGACTACCACGCTGCGGTGGGCGTGTGGCTGAAGCGCCTGGCTGCCGCCGGCCCGATC ACTGTGCCGCGTTTCCACTTCTGCACGTTCAACGACATGTATGCGTTTCGTACGCTCCGCGAGGTGTGA
Upstream 100 bases:
>100_bases CAATACCGCATCGGCCGCGATCAGGAGTATGTGCAATCGGCCTGGAAGATGGCCCCCACCGTGATGGTCGGCGTCAACGT CAAACTTTGAGGAGCTAAGC
Downstream 100 bases:
>100_bases AGTTGAGTGCGTAGGGCCATCTGTTGTGCGTGTAACGACACCTGCTGCGGCGCTGCAAGCTGATCATTGGCCGTGTGTAT GGACGCGCAGCGCCCTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSSCLDTTFSRRRLLTGAAGASLLATALPSLAGAAPPADVGRKFLRSRRPMPFAGNTFVGHLEQQGDGYASFDRVLDIYR ELPEHGFANKLAVLPPSSYHVTLLGGVNETDRAHGPWPSDLARDAALADINASFLSRLQQRNTTPLGACRFVVDPTAAMT GSNDNLLIPLLPADAATAQRLETARKGLMALTLLQRPDYSHYRFHISLAYLCETLDADEQADYHAAVGVWLKRLAAAGPI TVPRFHFCTFNDMYAFRTLREV
Sequences:
>Translated_262_residues MSSCLDTTFSRRRLLTGAAGASLLATALPSLAGAAPPADVGRKFLRSRRPMPFAGNTFVGHLEQQGDGYASFDRVLDIYR ELPEHGFANKLAVLPPSSYHVTLLGGVNETDRAHGPWPSDLARDAALADINASFLSRLQQRNTTPLGACRFVVDPTAAMT GSNDNLLIPLLPADAATAQRLETARKGLMALTLLQRPDYSHYRFHISLAYLCETLDADEQADYHAAVGVWLKRLAAAGPI TVPRFHFCTFNDMYAFRTLREV >Mature_261_residues SSCLDTTFSRRRLLTGAAGASLLATALPSLAGAAPPADVGRKFLRSRRPMPFAGNTFVGHLEQQGDGYASFDRVLDIYRE LPEHGFANKLAVLPPSSYHVTLLGGVNETDRAHGPWPSDLARDAALADINASFLSRLQQRNTTPLGACRFVVDPTAAMTG SNDNLLIPLLPADAATAQRLETARKGLMALTLLQRPDYSHYRFHISLAYLCETLDADEQADYHAAVGVWLKRLAAAGPIT VPRFHFCTFNDMYAFRTLREV
Specific function: Unknown
COG id: COG5255
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28616; Mature: 28485
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSCLDTTFSRRRLLTGAAGASLLATALPSLAGAAPPADVGRKFLRSRRPMPFAGNTFVG CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHEE HLEQQGDGYASFDRVLDIYRELPEHGFANKLAVLPPSSYHVTLLGGVNETDRAHGPWPSD HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCHHH LARDAALADINASFLSRLQQRNTTPLGACRFVVDPTAAMTGSNDNLLIPLLPADAATAQR HHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEECCHHHCCCCCCCEEEEEECCCHHHHHH LETARKGLMALTLLQRPDYSHYRFHISLAYLCETLDADEQADYHAAVGVWLKRLAAAGPI HHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC TVPRFHFCTFNDMYAFRTLREV CCCCEEEEECCHHHHHHHHHCC >Mature Secondary Structure SSCLDTTFSRRRLLTGAAGASLLATALPSLAGAAPPADVGRKFLRSRRPMPFAGNTFVG CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHEE HLEQQGDGYASFDRVLDIYRELPEHGFANKLAVLPPSSYHVTLLGGVNETDRAHGPWPSD HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCHHH LARDAALADINASFLSRLQQRNTTPLGACRFVVDPTAAMTGSNDNLLIPLLPADAATAQR HHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEECCHHHCCCCCCCEEEEEECCCHHHHHH LETARKGLMALTLLQRPDYSHYRFHISLAYLCETLDADEQADYHAAVGVWLKRLAAAGPI HHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC TVPRFHFCTFNDMYAFRTLREV CCCCEEEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA