Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
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Accession | NC_007086 |
Length | 5,148,708 |
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The map label for this gene is egl [H]
Identifier: 66766379
GI number: 66766379
Start: 32350
End: 33402
Strand: Reverse
Name: egl [H]
Synonym: XC_0027
Alternate gene names: 66766379
Gene position: 33402-32350 (Counterclockwise)
Preceding gene: 66766380
Following gene: 66766378
Centisome position: 0.65
GC content: 61.25
Gene sequence:
>1053_bases ATGTCTGCCTCCCCCTCCTGGCCACGCCAGCTGCTGCGCTGCGCGTTGGTCATGCTGTGCATCGCCACGATGTCCATCGC ACAGGCGCAAAGCCCCAATCGTCTGAAATACGCAGGCGTCAACATCTCCGGTGCGGAGATCCAGTCGTCCAAAAAACCGG GCGTGCTCAATATCGACTACCGCTATCCAACCGCGTCCGAGTACAGGTACTTCGCGGGCAAGCAAATGAACATCGTGCGC CTGCCGATCCTGTGGGAGCGCATGCAGCCCAAAGCTCAAGGTCCGCTGGATCAGGCACAACTGGCATTGCTGAAGCAGGC AGTGGCCAACGCCAAGGCCGCCAATCAATACCTGATTATCGATGTGCACAACTACGCCAAGTACTACGGCCAGAAGATTG GCAGTAAGCGGGTGCCGGTGCGCACGTTCACCGATCTCTGGCGCCGTCTGGCCATCGCGTTCAAGAGCGACAACGCCGTG ATTTTCGGGCTGATGAACGAGCCGTACGACATCTCGCCAGAGAGTTGGGCCGCCGCCGCGCAGGCGTCCATCGACAGCAT TCGTGCCACCGGTGCCACCAACCTGATTCTGGTGCCCGGTGCATTGTGGTCGGGCGCACACAGCTGGTATTCCACCGTGG CCGGGCAGTCCAATGCAGTGGCGCTTGCGAACATCCGCGACCCACTGAATCGCTATGCGATCGAAGTCCATCAATACCTG GATACCGACTCCAGCGGCACCAGTGCCGGTTGTGTGAGCCGCACGATCGGCGCGGAGCGCTTGCGCAGTTTCACCGGCTG GCTGCGCGCGCAAGGCAAGCGCGGTTTTCTTGGCGAATTCGGCACCGCCAATAACGCAACCTGCACTGCGGCGCTCGACG GCATGCTCGGTTATCTCGAAACCAACCACGATGTGTGGATCGGTTGGACGTTCTGGGCCGCGGGCGCGTGGTGGAAAACC AGCTATCCGTTCAACGTGCAGCCCGATGCGCAAGGCCGCGACAAGCCGCAGATGAAAACCCTGAGCGCACGCGCGCATCG CGTCACCCGATAA
Upstream 100 bases:
>100_bases TGCCGTTGCGCCTAGGGTAGAGACAGATGCGCTGTTGGCCGCGTCGCGCGGCATGACGTTGCGGGCAGCGTATCTCCCCC GCAACTGCAAGGAACACCCC
Downstream 100 bases:
>100_bases CGGCAATCGATCAGTTCGCTTGTGTACAACCGCAGCAGCCGGCGCACGCAGTAGACCTGTACTGCTAGTGCGTCGGTTGC ATGCGCAGCCGGAGATTTGG
Product: cellulase
Products: NA
Alternate protein names: Cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MSASPSWPRQLLRCALVMLCIATMSIAQAQSPNRLKYAGVNISGAEIQSSKKPGVLNIDYRYPTASEYRYFAGKQMNIVR LPILWERMQPKAQGPLDQAQLALLKQAVANAKAANQYLIIDVHNYAKYYGQKIGSKRVPVRTFTDLWRRLAIAFKSDNAV IFGLMNEPYDISPESWAAAAQASIDSIRATGATNLILVPGALWSGAHSWYSTVAGQSNAVALANIRDPLNRYAIEVHQYL DTDSSGTSAGCVSRTIGAERLRSFTGWLRAQGKRGFLGEFGTANNATCTAALDGMLGYLETNHDVWIGWTFWAAGAWWKT SYPFNVQPDAQGRDKPQMKTLSARAHRVTR
Sequences:
>Translated_350_residues MSASPSWPRQLLRCALVMLCIATMSIAQAQSPNRLKYAGVNISGAEIQSSKKPGVLNIDYRYPTASEYRYFAGKQMNIVR LPILWERMQPKAQGPLDQAQLALLKQAVANAKAANQYLIIDVHNYAKYYGQKIGSKRVPVRTFTDLWRRLAIAFKSDNAV IFGLMNEPYDISPESWAAAAQASIDSIRATGATNLILVPGALWSGAHSWYSTVAGQSNAVALANIRDPLNRYAIEVHQYL DTDSSGTSAGCVSRTIGAERLRSFTGWLRAQGKRGFLGEFGTANNATCTAALDGMLGYLETNHDVWIGWTFWAAGAWWKT SYPFNVQPDAQGRDKPQMKTLSARAHRVTR >Mature_349_residues SASPSWPRQLLRCALVMLCIATMSIAQAQSPNRLKYAGVNISGAEIQSSKKPGVLNIDYRYPTASEYRYFAGKQMNIVRL PILWERMQPKAQGPLDQAQLALLKQAVANAKAANQYLIIDVHNYAKYYGQKIGSKRVPVRTFTDLWRRLAIAFKSDNAVI FGLMNEPYDISPESWAAAAQASIDSIRATGATNLILVPGALWSGAHSWYSTVAGQSNAVALANIRDPLNRYAIEVHQYLD TDSSGTSAGCVSRTIGAERLRSFTGWLRAQGKRGFLGEFGTANNATCTAALDGMLGYLETNHDVWIGWTFWAAGAWWKTS YPFNVQPDAQGRDKPQMKTLSARAHRVTR
Specific function: Unknown
COG id: COG2730
COG function: function code G; Endoglucanase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 5 (cellulase A) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001547 - InterPro: IPR018087 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00150 Cellulase [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 38642; Mature: 38511
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASPSWPRQLLRCALVMLCIATMSIAQAQSPNRLKYAGVNISGAEIQSSKKPGVLNIDY CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHCCCCCCCEEEEEE RYPTASEYRYFAGKQMNIVRLPILWERMQPKAQGPLDQAQLALLKQAVANAKAANQYLII CCCCCCCCHHHCCCCCEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE DVHNYAKYYGQKIGSKRVPVRTFTDLWRRLAIAFKSDNAVIFGLMNEPYDISPESWAAAA EEHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCCCHHHHHHH QASIDSIRATGATNLILVPGALWSGAHSWYSTVAGQSNAVALANIRDPLNRYAIEVHQYL HHHHHHHHCCCCCEEEEECCCHHCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHH DTDSSGTSAGCVSRTIGAERLRSFTGWLRAQGKRGFLGEFGTANNATCTAALDGMLGYLE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHEE TNHDVWIGWTFWAAGAWWKTSYPFNVQPDAQGRDKPQMKTLSARAHRVTR CCCCEEEEEEHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SASPSWPRQLLRCALVMLCIATMSIAQAQSPNRLKYAGVNISGAEIQSSKKPGVLNIDY CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHCCCCCCCEEEEEE RYPTASEYRYFAGKQMNIVRLPILWERMQPKAQGPLDQAQLALLKQAVANAKAANQYLII CCCCCCCCHHHCCCCCEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE DVHNYAKYYGQKIGSKRVPVRTFTDLWRRLAIAFKSDNAVIFGLMNEPYDISPESWAAAA EEHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCCCHHHHHHH QASIDSIRATGATNLILVPGALWSGAHSWYSTVAGQSNAVALANIRDPLNRYAIEVHQYL HHHHHHHHCCCCCEEEEECCCHHCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHH DTDSSGTSAGCVSRTIGAERLRSFTGWLRAQGKRGFLGEFGTANNATCTAALDGMLGYLE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHEE TNHDVWIGWTFWAAGAWWKTSYPFNVQPDAQGRDKPQMKTLSARAHRVTR CCCCEEEEEEHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1735723; 2738021; 2195024 [H]